FFCP PHASE1:Hg19::chr7:45026200..45026270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27797 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_003697,uc003tmk.3,uc003tml.3_5end | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_1_at_SNHG15_5end | |||
|id=chr7:45026200..45026270,- | |||
|ontology_enrichment_celltype=CL:0000037!5.83e-33!172;CL:0000566!5.83e-33!172;CL:0000988!1.47e-32!182;CL:0002032!8.57e-30!165;CL:0000837!8.57e-30!165;CL:0000738!4.91e-24!140;CL:0002087!1.44e-22!119;CL:0002031!3.12e-19!124;CL:0000542!4.31e-17!53;CL:0000051!4.31e-17!53;CL:0000860!1.10e-16!45;CL:0000838!1.23e-16!52;CL:0002057!2.57e-16!42;CL:0000063!3.08e-14!578;CL:0000763!1.71e-13!112;CL:0000049!1.71e-13!112;CL:0000003!6.91e-11!722;CL:0000012!1.65e-10!682;CL:0000548!1.20e-09!679;CL:0000004!1.20e-09!679;CL:0000255!1.20e-09!679;CL:0000084!1.95e-09!25;CL:0000827!1.95e-09!25;CL:0000945!1.97e-07!24;CL:0000826!1.97e-07!24;CL:0002009!2.70e-07!65;CL:0000557!9.01e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-10;33!CL:0002057;1.57e-10;33!CL:0000542;2.49e-10;53!CL:0000084;1.94e-09;25!CL:0002087;5.61e-09;104!CL:0000576;7.63e-08;48!CL:0000945;2.05e-07;24!CL:0000988;9.33e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.11e-33,168;CL:0000988,1.73e-32,177;CL:0002032,9.12e-30,161;CL:0000837,9.12e-30,161;CL:0000738,5.00e-24,136;CL:0002087,1.29e-22,115;CL:0002031,3.24e-19,120;CL:0000542,4.31e-17,53;CL:0000051,4.31e-17,53;CL:0000838,1.23e-16,52;CL:0000860,2.57e-16,42;CL:0002057,2.57e-16,42;CL:0000763,1.97e-13,108;CL:0000049,1.97e-13,108;CL:0000473,6.01e-11,48;CL:0000234,6.01e-11,48;CL:0000084,1.95e-09,25;CL:0000827,1.95e-09,25;CL:0000945,1.97e-07,24;CL:0000826,1.97e-07,24;CL:0002009,3.05e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;6.61e-12;42!CL:0000051;2.49e-10;53 | |||
|ontology_enrichment_disease=DOID:162!1.79e-17!235;DOID:14566!4.75e-17!239;DOID:2531!4.85e-15!51;DOID:0060083!4.85e-15!51;DOID:1240!2.93e-12!39;DOID:0050686!2.21e-11!137;DOID:8692!4.27e-09!31;DOID:0050687!1.48e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.02e-09;39!DOID:2531;1.17e-09;51!DOID:0060083;1.17e-09;51!DOID:8692;6.21e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.79e-17,235;DOID:14566,4.75e-17,239;DOID:2531,4.85e-15,51;DOID:0060083,4.85e-15,51;DOID:1240,2.93e-12,39;DOID:0050686,2.21e-11,137;DOID:8692,4.27e-09,31;DOID:0050687,1.48e-07,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=22.8914757880901,12.846031433459,14.659258025981,27.0197905553452,18.3254048715188,34.8935409640147,43.0609792886128,17.6881564559513,22.4619640251861,36.8600904752263,80.2471343168292,26.649847399881,19.782523367134,4.33182235360163,9.27912652038164,10.7572023432284,6.62963980826375,9.49403117503585,8.78279037822912,31.3958698095809,44.0641493087586,36.6742024129363,18.6053391635187,16.561805433819,20.5889928935477,62.2769256845803,65.6804715599566,71.2332570888797,220.677359312235,132.037312945441,138.715246491204,75.392540407272,38.8555635223943,66.9254758401886,117.905079283219,118.995647591972,84.2633260891012,154.010723571862,181.893813855419,144.312229026041,8.06095707263728,8.74512898251245,8.49999373192816,34.6047808295364,46.8566170174124,67.4383690102129,56.9451140418927,46.8731392344881,68.754814338713,53.51078497192,86.0699973937778,101.450876622203,57.2277830022787,71.0033151942209,113.758248739247,41.413314699373,45.3024209096024,74.383473351323,57.5437717657297,71.888102065045,108.047974260038,48.4881411274473,56.0492877916786,72.0319828400253,100.122187326861,99.2924143209495,117.713405060164,44.973511080957,68.3142623130464,74.9301514232652,79.9127343476047,111.219846068245,153.80072029627,132.034553944964,132.027270278292,97.7009288069032,79.7533281140115,57.8181037439799,43.7173595816058,132.530925839681,90.507088125586,86.5828088844365,38.719173781491,44.7833661234948,40.9174256777235,56.7551196013455,40.8403906776733,37.9336610369959,35.6964231303826,47.7026877267682,73.4284730151188,99.8303221930596,81.4241975906737,64.7639510037227,130.037986611716,53.9937373788908,63.7339655168819,75.4580664478396,136.724996834674,33.2701125827449,152.205698517887,106.05230848458,85.723760499481,30.3036442727672,144.651500570145,58.484948170076,67.7009659412539,40.4768570333134,42.9195846947598,39.6295350094859,39.5180525433763,33.037551773796,77.5538725337576,66.8852070224283,59.5852485688368,29.6870477867623,100.020548830101,68.725489096526,61.2307654687197,47.4662467342904,42.3204245006672,57.0271226669025,31.7713501254101,31.8686661774502,46.224368824368,31.0178200177662,47.6254238214207,87.9005400459833,73.278613644681,80.5223685588362,14.6284119788377,10.0605128955545,10.9961803185436,15.9033227049209,21.0561922467074,18.8300474649071,17.4962908351242,32.6045363102766,16.1654537350556,35.6984329914728,19.3236528524877,11.1987109550544,67.0303330458278,61.5502175022153,7.46459005405772,4.70150290708022,8.90818335476397,63.2000154409156,66.923404561275,71.3198402552765,13.1183188862025,24.0865686629715,11.4556365530506,15.2633144319483,30.6234588433231,17.6075546841643,19.854521820997,8.52775305258785,9.96145535522789,8.03329470635209,9.26507429351038,17.4862584315258,14.8877855104383,26.8394048652484,12.9622711661082,15.0916540800095,17.9623498100936,19.3691746431314,19.9311628705648,24.6809071487714,21.6178057837881,17.1314542666882,34.9002237733493,40.9928409013982,23.35768172968,17.6016411213766,24.6281076312587,28.3968254541326,20.5707661675047,20.1843936051231,16.0123493594557,22.9400820027959,14.626918663789,29.6363478553314,25.0096711763592,18.4656061726816,15.55674996096,214.638431559758,28.7187270683895,22.2484010402335,28.8435953464976,61.1833737934015,51.4755963090658,34.5508984487531,18.1697212416855,21.3731712122476,21.3884367033834,8.31602000097437,14.3414818981563,28.2150022200788,114.260284548782,14.3085696860956,13.888155705788,14.1302698896933,12.2913733846635,20.8411701143333,9.4649977111156,16.5610987413631,19.1946910187082,11.9592137738398,16.7426201916054,23.107014398499,11.2327256869898,13.912589162464,12.8420630868797,26.1603314973963,12.4719366606334,16.1557615516233,15.5564328705486,11.3152239773168,14.2003837006646,8.46317625112178,12.2083626463551,12.9484771619409,15.5465288736776,18.0686895095072,12.6852654374779,19.0842866382939,15.3376004587764,11.4027160516907,18.9240638156721,39.4175547801896,15.6449532329816,10.2918550110862,17.9575397758225,12.0735661288315,10.8281922250438,64.3588992216751,61.7019965685852,67.9651104271419,67.3896173394927,60.3526060135965,76.4011393537731,59.9999321312732,51.8024667930914,92.3393176671337,28.0499072757366,46.2797853551371,20.57870056657,33.8120036186747,5.07020139287323,10.8110993834539,14.7697476670351,90.4999353800034,25.3356183398814,12.8675857723894,21.8403067963165,112.40175325762,34.8835534268359,27.9617104378759,191.249475217161,86.314587178205,37.5261489265711,5.56465943880369,7.0445216541493,14.8697441193906,21.2973335785241,16.55211124441,27.6571539285746,38.6318772942693,7.14029317653452,8.65815781015179,8.76923857503497,45.9295786535207,6.55130299975552,19.5649634194493,113.112414173697,79.0524312757976,16.8688378832693,22.1698457053175,13.1192166679707,28.4039518290858,22.0503528727951,17.5476982462668,17.7794104018073,14.1335717456563,22.2713149699089,27.3715913636328,40.8225146032194,32.4370502471431,26.0102053693826,32.0694901227732,20.4901232351642,17.5278503112071,13.4442584388089,21.4593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| |||
|short_description=p1@SNHG15 | |||
}} |
Revision as of 16:52, 22 January 2014
Short description: | p1@SNHG15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNHG15_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | 0bp_to_NR_003697, uc003tmk.3, uc003tml.3_5end |
EntrezGene: | SNHG15 |
HGNC: | 27797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.11e-33 | 168 |
hematopoietic cell | 1.73e-32 | 177 |
hematopoietic oligopotent progenitor cell | 9.12e-30 | 161 |
hematopoietic multipotent progenitor cell | 9.12e-30 | 161 |
leukocyte | 5.00e-24 | 136 |
nongranular leukocyte | 1.29e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 3.24e-19 | 120 |
lymphocyte | 4.31e-17 | 53 |
common lymphoid progenitor | 4.31e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.23e-16 | 52 |
classical monocyte | 2.57e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-16 | 42 |
myeloid cell | 1.97e-13 | 108 |
common myeloid progenitor | 1.97e-13 | 108 |
defensive cell | 6.01e-11 | 48 |
phagocyte | 6.01e-11 | 48 |
T cell | 1.95e-09 | 25 |
pro-T cell | 1.95e-09 | 25 |
lymphocyte of B lineage | 1.97e-07 | 24 |
pro-B cell | 1.97e-07 | 24 |
macrophage dendritic cell progenitor | 3.05e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.79e-17 | 235 |
disease of cellular proliferation | 4.75e-17 | 239 |
hematologic cancer | 4.85e-15 | 51 |
immune system cancer | 4.85e-15 | 51 |
leukemia | 2.93e-12 | 39 |
organ system cancer | 2.21e-11 | 137 |
myeloid leukemia | 4.27e-09 | 31 |
cell type cancer | 1.48e-07 | 143 |