FFCP PHASE1:Hg19::chr7:45957006..45957009,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=permissive | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_at_chr7:45957006..45957009,+ | |||
|id=chr7:45957006..45957009,+ | |||
|ontology_enrichment_celltype=CL:0000153!4.34e-16!9;CL:0000447!4.34e-16!9;CL:0000667!2.62e-11!6;CL:0000058!2.62e-11!6;CL:0000138!2.62e-11!6;CL:0000327!4.41e-10!14;CL:0002589!3.17e-09!2;CL:0000499!2.21e-08!27;CL:0000055!2.47e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.97e-32;9!CL:0000447;1.97e-32;9!CL:0000138;8.50e-28;6!CL:0000327;1.17e-19;15!CL:0002591;2.47e-19;1!CL:0000499;3.01e-16;28!CL:0002595;2.17e-15;5!CL:0002589;2.37e-10;2!CL:0002593;2.37e-10;2!CL:0000359;8.98e-09;32!CL:0000135;2.55e-07;3!CL:0000214;2.55e-07;3!CL:0000388;2.55e-07;3!CL:0000151;4.57e-07;36!CL:0000192;9.41e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.84e-32,9;CL:0000447,2.84e-32,9;CL:0000058,9.34e-28,6;CL:0000138,9.34e-28,6;CL:0000327,1.45e-19,15;CL:0002591,2.71e-19,1;CL:0000499,3.32e-16,28;CL:0002595,2.17e-15,5;CL:0002589,2.27e-10,2;CL:0002593,2.99e-10,2;CL:0000359,2.35e-09,32;CL:0000151,2.35e-08,36;CL:0000135,2.32e-07,3;CL:0000388,2.32e-07,3;CL:0000214,3.16e-07,3;CL:0000192,4.96e-07,43;CL:0000514,4.96e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000514;9.41e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!3.29e-11!12;UBERON:0000042!3.29e-11!12;UBERON:0001529!3.17e-09!2;UBERON:0007204!3.17e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.17e-15;5!UBERON:0001533;2.17e-15;5!UBERON:0003513;2.83e-11;7!UBERON:0000078;2.37e-10;2!UBERON:0002012;2.37e-10;2!UBERON:0001529;2.37e-10;2!UBERON:0002456;2.37e-10;2!UBERON:0007204;2.37e-10;2!UBERON:0008886;2.37e-10;2!UBERON:0007846;2.55e-07;3!UBERON:0006915;2.55e-07;3!UBERON:0007616;2.55e-07;3!UBERON:0000043;2.55e-07;3!UBERON:0007845;2.55e-07;3!UBERON:0002217;2.55e-07;3!UBERON:0002018;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,2.17e-15,5;UBERON:0001533,2.17e-15,5;UBERON:0003513,2.83e-11,7;UBERON:0001529,2.27e-10,2;UBERON:0007204,2.27e-10,2;UBERON:0000078,2.49e-10,2;UBERON:0007497,2.49e-10,2;UBERON:0003643,2.49e-10,2;UBERON:0003504,2.49e-10,2;UBERON:0003469,2.49e-10,2;UBERON:0003496,2.49e-10,2;UBERON:0002012,2.49e-10,2;UBERON:0008886,2.49e-10,2;UBERON:0007303,2.49e-10,2;UBERON:0002061,2.49e-10,2;UBERON:0005432,2.49e-10,2;UBERON:0004363,2.49e-10,2;UBERON:0002456,2.99e-10,2;UBERON:0007846,2.32e-07,3;UBERON:0000043,2.32e-07,3;UBERON:0007845,2.32e-07,3;UBERON:0004145,2.63e-07,3;UBERON:0006915,3.16e-07,3;UBERON:0007616,3.16e-07,3;UBERON:0002217,3.16e-07,3;UBERON:0002018,3.16e-07,3;UBERON:0001637,3.42e-07,42;UBERON:0003509,3.42e-07,42;UBERON:0004572,3.42e-07,42 | |||
|phase1_expression=0.181678379270557,0,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.14446559053763,1.00267582127178,1.88300474649071,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0,0.37223371266318,0,0,0.504867548488229,0.276149695926898,0,1.06502877754984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.55597265731176,1.28812398067792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,1.13008116620243,0,0,1.75380354101505,0,0,0,0,0,0,0.0982490410131212,0,0,1.05553817648832,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0.863710364874486,1.9110067515482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p@chr7:45957006..45957009,+ | |||
}} |
Revision as of 16:56, 22 January 2014
Short description: | p@chr7:45957006..45957009, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Permissive |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:45957006..45957009, + |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.84e-32 | 9 |
carbohydrate secreting cell | 2.84e-32 | 9 |
chondroblast | 9.34e-28 | 6 |
chondrocyte | 9.34e-28 | 6 |
extracellular matrix secreting cell | 1.45e-19 | 15 |
smooth muscle cell of the pulmonary artery | 2.71e-19 | 1 |
stromal cell | 3.32e-16 | 28 |
smooth muscle cell of the subclavian artery | 2.17e-15 | 5 |
smooth muscle cell of the brachiocephalic vasculature | 2.27e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 2.99e-10 | 2 |
vascular associated smooth muscle cell | 2.35e-09 | 32 |
secretory cell | 2.35e-08 | 36 |
fibrocyte | 2.32e-07 | 3 |
tendon cell | 2.32e-07 | 3 |
synovial cell | 3.16e-07 | 3 |
smooth muscle cell | 4.96e-07 | 43 |
smooth muscle myoblast | 4.96e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 2.17e-15 | 5 |
subclavian artery | 2.17e-15 | 5 |
trunk blood vessel | 2.83e-11 | 7 |
brachiocephalic artery | 2.27e-10 | 2 |
brachiocephalic vasculature | 2.27e-10 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.49e-10 | 2 |
developing epithelial placode | 2.49e-10 | 2 |
respiratory system arterial blood vessel | 2.49e-10 | 2 |
respiratory system blood vessel | 2.49e-10 | 2 |
respiratory system artery | 2.49e-10 | 2 |
head blood vessel | 2.49e-10 | 2 |
pulmonary artery | 2.49e-10 | 2 |
pulmonary vascular system | 2.49e-10 | 2 |
pharyngeal vasculature | 2.49e-10 | 2 |
truncus arteriosus | 2.49e-10 | 2 |
aortic sac | 2.49e-10 | 2 |
pharyngeal arch artery | 2.49e-10 | 2 |
internal thoracic artery | 2.99e-10 | 2 |
dense regular connective tissue | 2.32e-07 | 3 |
tendon | 2.32e-07 | 3 |
regular connective tissue | 2.32e-07 | 3 |
outflow tract | 2.63e-07 | 3 |
stratified squamous epithelium | 3.16e-07 | 3 |
layer of synovial tissue | 3.16e-07 | 3 |
synovial joint | 3.16e-07 | 3 |
synovial membrane of synovial joint | 3.16e-07 | 3 |
artery | 3.42e-07 | 42 |
arterial blood vessel | 3.42e-07 | 42 |
arterial system | 3.42e-07 | 42 |