FFCP PHASE1:Hg19::chr7:87849340..87849395,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6717 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11292 | |||
|TSSclassifier=strong | |||
|UniProt=P30626,B4DHQ6,E9PG82 | |||
|association_with_transcript=0bp_to_ENST00000265729,ENST00000419179,ENST00000457606,ENST00000486860,ENST00000488015,NM_003130,uc003ujq.1,uc010lej.1,uc011khg.1_5end | |||
|description=CAGE_peak_1_at_SRI_5end | |||
|id=chr7:87849340..87849395,- | |||
|ontology_enrichment_celltype=CL:0000222!2.13e-13!119;CL:0000220!5.77e-11!246;CL:0002321!6.66e-11!248;CL:0002139!2.31e-09!24;CL:0000071!5.40e-09!18;CL:0002546!5.40e-09!18;CL:0000055!3.76e-08!180;CL:0000213!1.20e-07!57;CL:0000215!1.20e-07!57;CL:0002078!4.39e-07!44;CL:0000115!5.80e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.42e-09;24!CL:0000071;5.54e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.55e-14,121;CL:0002321,2.56e-11,250;CL:0002139,2.31e-09,24;CL:0000071,5.40e-09,18;CL:0002546,5.40e-09,18;CL:0000213,6.34e-08,58;CL:0000215,6.34e-08,58;CL:0002078,2.26e-07,45;CL:0000115,2.90e-07,36;CL:0000393,7.34e-07,61;CL:0000211,7.34e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;5.54e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.51e-21!312;UBERON:0000483!1.03e-20!309;UBERON:0000477!9.72e-17!286;UBERON:0000025!1.35e-16!194;UBERON:0001017!4.80e-15!82;UBERON:0005743!6.65e-15!86;UBERON:0001049!7.27e-14!57;UBERON:0005068!7.27e-14!57;UBERON:0006241!7.27e-14!57;UBERON:0007135!7.27e-14!57;UBERON:0004111!8.41e-14!241;UBERON:0000073!2.37e-13!94;UBERON:0001016!2.37e-13!94;UBERON:0002616!9.98e-13!59;UBERON:0000475!1.45e-12!365;UBERON:0000481!1.57e-12!347;UBERON:0003075!3.03e-12!86;UBERON:0007284!3.03e-12!86;UBERON:0002020!3.86e-12!34;UBERON:0003528!3.86e-12!34;UBERON:0001893!5.38e-12!34;UBERON:0000955!6.84e-12!69;UBERON:0006238!6.84e-12!69;UBERON:0001869!1.51e-11!32;UBERON:0002791!1.64e-11!33;UBERON:0000064!1.27e-10!219;UBERON:0002780!1.32e-10!41;UBERON:0001890!1.32e-10!41;UBERON:0006240!1.32e-10!41;UBERON:0000033!1.44e-10!123;UBERON:0002346!1.55e-10!90;UBERON:0003080!3.19e-10!42;UBERON:0004121!3.92e-10!169;UBERON:0003056!6.89e-10!61;UBERON:0006914!1.08e-09!25;UBERON:0000487!3.83e-09!22;UBERON:0000153!4.00e-09!129;UBERON:0007811!4.00e-09!129;UBERON:0000924!4.36e-09!173;UBERON:0006601!4.36e-09!173;UBERON:0001986!5.40e-09!18;UBERON:0004638!5.40e-09!18;UBERON:0004852!5.40e-09!18;UBERON:0000486!1.10e-08!82;UBERON:0000956!1.73e-08!25;UBERON:0000203!1.73e-08!25;UBERON:0002049!2.38e-08!79;UBERON:0007798!2.38e-08!79;UBERON:0000914!2.81e-08!83;UBERON:0002329!2.81e-08!83;UBERON:0003077!2.81e-08!83;UBERON:0003059!2.81e-08!83;UBERON:0007282!2.81e-08!83;UBERON:0009618!2.81e-08!83;UBERON:0007285!2.81e-08!83;UBERON:0003914!4.22e-07!118;UBERON:0004872!6.37e-07!84;UBERON:0000055!6.89e-07!69;UBERON:0002619!8.32e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.28e-11;34!UBERON:0002020;9.28e-11;34!UBERON:0001893;1.04e-10;34!UBERON:0001869;1.33e-10;32!UBERON:0002791;2.15e-10;32!UBERON:0006914;1.14e-09;25!UBERON:0000487;4.05e-09;22!UBERON:0004638;5.54e-09;18!UBERON:0001986;5.54e-09;18!UBERON:0004852;5.54e-09;18!UBERON:0000956;1.75e-08;25!UBERON:0000203;1.75e-08;25!UBERON:0002780;7.12e-08;41!UBERON:0001890;7.12e-08;41!UBERON:0000073;9.49e-08;53!UBERON:0002616;9.49e-08;53!UBERON:0002619;8.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,7.05e-22,309;UBERON:0000483,2.10e-21,306;UBERON:0000025,1.50e-16,192;UBERON:0001017,2.33e-15,81;UBERON:0010314,7.30e-15,132;UBERON:0001049,2.96e-14,56;UBERON:0005068,2.96e-14,56;UBERON:0006241,2.96e-14,56;UBERON:0007135,2.96e-14,56;UBERON:0004111,9.27e-14,240;UBERON:0001016,1.11e-13,89;UBERON:0003075,3.38e-13,82;UBERON:0007284,3.38e-13,82;UBERON:0010371,5.45e-13,104;UBERON:0000073,8.98e-13,53;UBERON:0002616,8.98e-13,53;UBERON:0000955,3.48e-12,68;UBERON:0006238,3.48e-12,68;UBERON:0003528,3.86e-12,34;UBERON:0002020,3.86e-12,34;UBERON:0001893,5.38e-12,34;UBERON:0001869,1.51e-11,32;UBERON:0002346,2.39e-11,86;UBERON:0002791,2.95e-11,32;UBERON:0002780,1.32e-10,41;UBERON:0001890,1.32e-10,41;UBERON:0003080,1.32e-10,41;UBERON:0006240,1.32e-10,41;UBERON:0003056,4.23e-10,61;UBERON:0004121,9.85e-10,171;UBERON:0000924,9.85e-10,171;UBERON:0006601,9.85e-10,171;UBERON:0006914,1.08e-09,25;UBERON:0000487,3.83e-09,22;UBERON:0004638,5.40e-09,18;UBERON:0001986,5.40e-09,18;UBERON:0004852,5.40e-09,18;UBERON:0000486,6.92e-09,83;UBERON:0002049,1.22e-08,78;UBERON:0007798,1.22e-08,78;UBERON:0000956,1.73e-08,25;UBERON:0000203,1.73e-08,25;UBERON:0007503,5.18e-08,78;UBERON:0011216,1.88e-07,223;UBERON:0003077,3.17e-07,72;UBERON:0007285,3.17e-07,72;UBERON:0007524,3.23e-07,73;UBERON:0004872,3.64e-07,83;UBERON:0000055,3.66e-07,68;UBERON:0003914,6.25e-07,117;UBERON:0002329,7.20e-07,71;UBERON:0003059,7.20e-07,71;UBERON:0007282,7.20e-07,71;UBERON:0004290,7.20e-07,71;UBERON:0009618,7.20e-07,71;UBERON:0002619,8.32e-07,22;UBERON:0007500,8.43e-07,59;UBERON:0001981,8.43e-07,59;UBERON:0004537,8.43e-07,59;UBERON:0006965,8.43e-07,59 | |||
|phase1_expression=110.097097837957,70.6531728840244,74.4239253626728,67.0491098965974,57.6579811811201,61.9360352111262,116.517943957423,143.400411267891,107.086107561934,146.457426154899,155.609660457851,85.6290178750275,94.6923451840148,136.142988256051,129.244976533887,70.5941403774364,79.5556776991649,85.4462805753227,78.5571806052716,109.823983804495,85.476289631342,115.664792225414,279.938795414173,179.989868970843,241.544038580401,168.033079239745,204.102065372565,211.889423296425,60.1847343578823,39.9182574021101,27.7120860735776,88.264437549977,76.2050974508973,97.9848126941987,115.193727262909,66.6773700366007,94.5393414658208,38.2256831886995,32.2876560426928,37.3258697631265,38.513461569267,42.7539639145053,36.8333061716887,23.699912921069,20.0274250155069,18.436388650274,33.7022103513243,20.5583944010913,26.3250415260838,32.2215479400809,26.1283920659683,41.3843902305024,27.9244001396661,20.0100251910986,18.9597081232078,26.9186545545925,18.5576182039335,31.910734791202,37.648318761621,33.6975478429898,31.9668562899521,39.9120073225927,32.7120398499476,28.1308335351578,53.688709146288,42.5538918518355,30.5182902007832,27.386104512985,15.1230046341858,27.1486055881396,37.5347691632689,36.8277635987565,36.7096369431426,66.5454151882617,51.0250319916104,78.8316507111493,37.8547486963689,28.9841403184107,43.3959084082116,87.4989123285633,50.3259193313698,91.332076882317,84.4781973414349,72.0902966866013,68.4922125474937,52.9145475982469,61.2605860165099,79.8905891536732,85.9358334620321,71.5540315901523,29.0298614245819,29.9490966579179,27.1413991968912,80.6245104332058,45.961702164486,74.5376959913468,20.064396551611,23.5806457649499,30.0178188539283,36.9482154813399,51.1697958614737,51.6058108250859,44.8101475338196,66.2892218466783,48.3153688258733,49.1805245975639,54.7023804805332,58.2815504751822,69.8418696396546,55.9088875652499,70.4692545353913,52.1645554323094,36.1819214115427,33.7101443393039,33.4513676175926,63.6798505960322,60.9320584827055,66.6637244236302,47.314682407647,71.6772182229218,78.1300144627702,107.401081022666,42.9139089371652,50.9386712394585,51.2215978864618,64.6401898080166,81.2916716951836,32.6602924024067,27.2788999699177,27.0821635260834,197.483561714309,198.527454472276,107.91600219594,132.286729772751,134.859897961054,122.829848078779,104.182459063694,149.396905182909,94.0621430782475,98.4478524733784,101.361342689867,60.8397805686875,84.1522115955772,114.943177263173,80.1632062327068,70.348413868904,62.7561573649044,40.5434061319081,50.9075470594314,38.2601226369452,127.207940714691,160.003634689739,179.471639331126,150.371912551787,159.829285195974,131.781542089292,126.859944687844,110.860789683642,96.0568909254118,84.6843150294616,136.156309182892,212.876189601184,187.439660196994,119.122838032061,164.458815419997,109.481466876282,108.896745723692,113.174537885739,214.643292452237,166.121490424423,189.430603224041,67.2080128923923,69.8004475466986,100.737726044925,84.9822037398995,102.444083936645,42.7681654026697,30.1178451786254,101.080488926532,97.5579024247614,174.000863039419,107.547051109882,84.0269795579369,105.209034886426,142.375317611823,95.0524645610169,136.55369410176,94.43153702902,157.952998876142,176.275792857235,177.395583814988,112.502249700727,105.379286783654,107.023514707113,111.672331676427,103.426495176509,89.6867780605644,66.528160007795,78.8781504398596,73.7230703169801,103.481012421538,114.805229716673,97.3422084603881,78.6862087975079,83.4057479673592,93.172289922902,82.4806943397216,154.154336914469,29.2405106172845,88.6263163597055,85.8324199696225,27.9084719358494,62.1406751307787,29.6286621052474,83.938702205547,39.6624380766976,62.7494313238119,30.796920457782,83.4892580685655,60.6172713070545,32.3058729190119,77.2768593406001,107.501415524849,98.949556819608,89.1879814332029,108.698941652432,67.3294857835367,90.6503615318959,82.4976994373581,60.7453782390071,67.3696671837928,83.2148378692892,93.8697193978896,95.199658852547,120.177381576658,99.3747365988435,106.838163287099,125.050287642115,133.350489851778,130.14595613708,120.441018223774,122.884006468117,122.194368842215,133.617826386723,131.664603099107,119.271618653381,93.0075872827057,67.316051425654,101.247206787524,76.4445299204818,38.0265104465493,33.4161253670393,49.0355622545565,124.492594034931,42.7999766130035,104.656364282101,93.507243168149,114.649788322772,117.920484638843,88.6071420167128,79.8230348010296,125.832109018829,125.568267561988,81.3831442925039,76.7852860302274,124.443877970046,123.617131857955,103.688512967856,86.9224837755203,96.1504501546257,59.8307324792375,54.7569980425816,63.3168751349982,158.410179437653,95.4138488169522,110.159250557334,118.933718149383,113.637869958959,178.656328490988,100.503300530772,118.689289049829,27.1599831358411,36.0299883542404,29.6669718551993,86.6111278145186,69.1399050260483,65.6417704376263,92.3791208522608,126.991953488605,91.6046326423948,61.7385094482049,100.020927236062,90.6796943173223,117.267919027699,59.4649892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298015 | |||
|short_description=p1@SRI | |||
}} |
Revision as of 17:45, 22 January 2014
Short description: | p1@SRI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SRI_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265729, ENST00000419179, ENST00000457606, ENST00000486860, ENST00000488015, NM_003130, uc003ujq.1, uc010lej.1, uc011khg.1_5end |
EntrezGene: | SRI |
HGNC: | 11292 |
UniProt: | P30626B4DHQ6E9PG82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.55e-14 | 121 |
embryonic cell | 2.56e-11 | 250 |
endothelial cell of vascular tree | 2.31e-09 | 24 |
blood vessel endothelial cell | 5.40e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.40e-09 | 18 |
lining cell | 6.34e-08 | 58 |
barrier cell | 6.34e-08 | 58 |
meso-epithelial cell | 2.26e-07 | 45 |
endothelial cell | 2.90e-07 | 36 |
electrically responsive cell | 7.34e-07 | 61 |
electrically active cell | 7.34e-07 | 61 |