FFCP PHASE1:Mm9::chr3:95032091..95032183,-: Difference between revisions
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{{FFCP|EntrezGene=56772|HGNC=|MCL_coexpression_id=13|UniProt=P97783,Q543U0|association_with_transcript=415bp_to_ENSMUST00000065482,NM_019914,uc008qit.2_5end|description=CAGE_peak_1_at_Mllt11_5end|id=chr3:95032091..95032183,-|ontology_enrichment_celltype=CL:0000540!1.31e-17!33;CL:0000047!1.31e-17!33;CL:0000031!1.31e-17!33;CL:0000404!1.31e-17!33;CL:0000117!4.44e-15!23;CL:0000337!4.44e-15!23;CL:0000221!4.67e-15!44;CL:0000133!4.67e-15!44;CL:0002319!5.97e-15!43;CL:0000393!8.67e-15!39;CL:0000211!8.67e-15!39;CL:0000055!4.57e-12!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.24e-17,33;CL:0000047,1.24e-17,33;CL:0000031,1.24e-17,33;CL:0000404,1.24e-17,33;CL:0000117,4.25e-15,23;CL:0000337,4.25e-15,23;CL:0000221,4.47e-15,44;CL:0000133,4.47e-15,44;CL:0002319,5.71e-15,43;CL:0000393,8.29e-15,39;CL:0000211,8.29e-15,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.92e-30!75;UBERON:0001016!3.92e-30!75;UBERON:0001017!8.97e-30!73;UBERON:0005743!8.97e-30!73;UBERON:0004121!2.90e-26!102;UBERON:0000924!2.90e-26!102;UBERON:0006601!2.90e-26!102;UBERON:0002346!9.29e-26!71;UBERON:0003075!9.29e-26!71;UBERON:0007284!9.29e-26!71;UBERON:0001049!6.47e-23!52;UBERON:0005068!6.47e-23!52;UBERON:0006241!6.47e-23!52;UBERON:0007135!6.47e-23!52;UBERON:0000033!2.45e-22!63;UBERON:0000955!4.04e-21!50;UBERON:0006238!4.04e-21!50;UBERON:0002616!1.25e-20!49;UBERON:0003056!1.66e-19!49;UBERON:0002020!4.50e-19!34;UBERON:0007811!1.67e-18!86;UBERON:0000153!7.73e-18!94;UBERON:0003080!1.11e-17!40;UBERON:0002780!3.35e-17!39;UBERON:0001890!3.35e-17!39;UBERON:0006240!3.35e-17!39;UBERON:0002791!9.71e-16!29;UBERON:0003528!9.71e-16!29;UBERON:0001893!9.71e-16!29;UBERON:0000956!5.42e-11!21;UBERON:0001869!5.42e-11!21;UBERON:0000203!5.42e-11!21;UBERON:0002619!1.05e-08!17;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.56e-30,75;UBERON:0001017,8.16e-30,73;UBERON:0002346,2.05e-26,64;UBERON:0003075,2.05e-26,64;UBERON:0007284,2.05e-26,64;UBERON:0004121,4.35e-26,95;UBERON:0000924,4.35e-26,95;UBERON:0006601,4.35e-26,95;UBERON:0000073,3.98e-24,54;UBERON:0001049,6.02e-23,52;UBERON:0005068,6.02e-23,52;UBERON:0006241,6.02e-23,52;UBERON:0007135,6.02e-23,52;UBERON:0010371,1.55e-21,73;UBERON:0003056,1.57e-19,49;UBERON:0000955,1.80e-19,47;UBERON:0006238,1.80e-19,47;UBERON:0002020,4.24e-19,34;UBERON:0002616,5.46e-19,46;UBERON:0010314,2.23e-18,92;UBERON:0003080,1.05e-17,40;UBERON:0002780,3.18e-17,39;UBERON:0001890,3.18e-17,39;UBERON:0006240,3.18e-17,39;UBERON:0003528,9.26e-16,29;UBERON:0002791,9.26e-16,29;UBERON:0001893,9.26e-16,29;UBERON:0000956,5.26e-11,21;UBERON:0001869,5.26e-11,21;UBERON:0000203,5.26e-11,21;UBERON:0002619,1.02e-08,17;UBERON:0002021,4.44e-07,10;UBERON:0000411,4.44e-07,10;UBERON:0001950,4.44e-07,10|phase1_expression=23.0614339830903,0,0,0,0,0.33575854382378,0.467225281191051,7.48915275961142,12.3894075493467,14.0438715793196,7.19115466547121,9.33334260245436,6.33442700745461,6.38168937658681,2.33176833270964,1.82227740650843,1.39912375625629,8.51747846467242,9.04955261797876,4.66828616977833,57.23413427167,9.82980416888764,12.015190300391,0.95995453676044,1.14704640533585,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,1.99557459589774,5.08024538767705,5.53558308826113,0,0.577703239502549,0.166234645358492,0,0.418531630736908,0,1.57057123192139,1.76469446409304,0,1.45653105909346,6.29484089877886,6.58950052926845,6.60768307782054,10.1710874765245,6.75877984779384,6.15121311656521,4.27745777963423,2.51975558925653,7.18762821824858,3.18786951509699,4.35217285206807,4.7053131879945,10.0331180054019,3.72493471920384,3.6097046459421,425.269200726875,514.708222831688,403.11677262993,5.76035704517525,5.33576877666684,3.1496490104849,0,2.1314403448383,11.085204089181,26.5110630671873,307.958148556179,347.505285265772,341.988387157347,411.051766557073,383.648655632953,319.333513553385,325.491219577931,312.534387447407,196.006268178912,239.796820923983,233.328324016234,484.813993696193,612.601261561735,504.244142698944,220.27538621209,215.538079642133,225.224617223018,420.729620056397,418.003254826166,435.988303785378,40.3620610465871,23.8806129937442,1.73918693221007,0,0.679971333707751,1.61910957491345,0.649776417447669,0,16.2915527352832,5.79463096765396,2.85764605063156,2.82671659608272,24.0842247818124,0,0,0,5.19578498426914,6.33399663687746,7.07734223020697,10.6191008138726,12.4290184150642,4.15637989381509,22.3796071528315,37.7537193107055,29.2881681515194,29.0894696266562,25.0463946199051,2.13633205260448,1.48316980640624,3.32578520915797,6.19227386364912,15.2060838950565,10.3795513676385,11.6370060752453,1.86391761218122,80.5147191781755,85.2448096730762,2.04365644166873,2.75574786363617,3.59941638596045,2.54140454146129,166.567191018163,164.242716411887,447.580802226023,285.071885115333,272.592677514132,182.645691167853,203.937267676171,3.46253837091075,4.97627882440372,3.0326731012041,9.89076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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56772 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97783,uniprot:Q543U0 | |||
|association_with_transcript=415bp_to_ENSMUST00000065482,NM_019914,uc008qit.2_5end | |||
|cluster_id=chr3:95032091..95032183,- | |||
|description=CAGE_peak_1_at_Mllt11_5end | |||
|id=chr3:95032091..95032183,- | |||
|ontology_enrichment_celltype=CL:0000540!1.31e-17!33;CL:0000047!1.31e-17!33;CL:0000031!1.31e-17!33;CL:0000404!1.31e-17!33;CL:0000117!4.44e-15!23;CL:0000337!4.44e-15!23;CL:0000221!4.67e-15!44;CL:0000133!4.67e-15!44;CL:0002319!5.97e-15!43;CL:0000393!8.67e-15!39;CL:0000211!8.67e-15!39;CL:0000055!4.57e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.24e-17,33;CL:0000047,1.24e-17,33;CL:0000031,1.24e-17,33;CL:0000404,1.24e-17,33;CL:0000117,4.25e-15,23;CL:0000337,4.25e-15,23;CL:0000221,4.47e-15,44;CL:0000133,4.47e-15,44;CL:0002319,5.71e-15,43;CL:0000393,8.29e-15,39;CL:0000211,8.29e-15,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.92e-30!75;UBERON:0001016!3.92e-30!75;UBERON:0001017!8.97e-30!73;UBERON:0005743!8.97e-30!73;UBERON:0004121!2.90e-26!102;UBERON:0000924!2.90e-26!102;UBERON:0006601!2.90e-26!102;UBERON:0002346!9.29e-26!71;UBERON:0003075!9.29e-26!71;UBERON:0007284!9.29e-26!71;UBERON:0001049!6.47e-23!52;UBERON:0005068!6.47e-23!52;UBERON:0006241!6.47e-23!52;UBERON:0007135!6.47e-23!52;UBERON:0000033!2.45e-22!63;UBERON:0000955!4.04e-21!50;UBERON:0006238!4.04e-21!50;UBERON:0002616!1.25e-20!49;UBERON:0003056!1.66e-19!49;UBERON:0002020!4.50e-19!34;UBERON:0007811!1.67e-18!86;UBERON:0000153!7.73e-18!94;UBERON:0003080!1.11e-17!40;UBERON:0002780!3.35e-17!39;UBERON:0001890!3.35e-17!39;UBERON:0006240!3.35e-17!39;UBERON:0002791!9.71e-16!29;UBERON:0003528!9.71e-16!29;UBERON:0001893!9.71e-16!29;UBERON:0000956!5.42e-11!21;UBERON:0001869!5.42e-11!21;UBERON:0000203!5.42e-11!21;UBERON:0002619!1.05e-08!17;UBERON:0002021!4.53e-07!10;UBERON:0000411!4.53e-07!10;UBERON:0001950!4.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.56e-30,75;UBERON:0001017,8.16e-30,73;UBERON:0002346,2.05e-26,64;UBERON:0003075,2.05e-26,64;UBERON:0007284,2.05e-26,64;UBERON:0004121,4.35e-26,95;UBERON:0000924,4.35e-26,95;UBERON:0006601,4.35e-26,95;UBERON:0000073,3.98e-24,54;UBERON:0001049,6.02e-23,52;UBERON:0005068,6.02e-23,52;UBERON:0006241,6.02e-23,52;UBERON:0007135,6.02e-23,52;UBERON:0010371,1.55e-21,73;UBERON:0003056,1.57e-19,49;UBERON:0000955,1.80e-19,47;UBERON:0006238,1.80e-19,47;UBERON:0002020,4.24e-19,34;UBERON:0002616,5.46e-19,46;UBERON:0010314,2.23e-18,92;UBERON:0003080,1.05e-17,40;UBERON:0002780,3.18e-17,39;UBERON:0001890,3.18e-17,39;UBERON:0006240,3.18e-17,39;UBERON:0003528,9.26e-16,29;UBERON:0002791,9.26e-16,29;UBERON:0001893,9.26e-16,29;UBERON:0000956,5.26e-11,21;UBERON:0001869,5.26e-11,21;UBERON:0000203,5.26e-11,21;UBERON:0002619,1.02e-08,17;UBERON:0002021,4.44e-07,10;UBERON:0000411,4.44e-07,10;UBERON:0001950,4.44e-07,10 | |||
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| |||
|short_description=p1@Mllt11 | |||
}} |
Revision as of 07:59, 4 August 2015
Short description: | p1@Mllt11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mllt11_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 415bp_to_ENSMUST00000065482, NM_019914, uc008qit.2_5end |
EntrezGene: | 56772 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.24e-17 | 33 |
neuronal stem cell | 1.24e-17 | 33 |
neuroblast | 1.24e-17 | 33 |
electrically signaling cell | 1.24e-17 | 33 |
CNS neuron (sensu Vertebrata) | 4.25e-15 | 23 |
neuroblast (sensu Vertebrata) | 4.25e-15 | 23 |
ectodermal cell | 4.47e-15 | 44 |
neurectodermal cell | 4.47e-15 | 44 |
neural cell | 5.71e-15 | 43 |
electrically responsive cell | 8.29e-15 | 39 |
electrically active cell | 8.29e-15 | 39 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.56e-30 | 75 |
central nervous system | 8.16e-30 | 73 |
neurectoderm | 2.05e-26 | 64 |
neural plate | 2.05e-26 | 64 |
presumptive neural plate | 2.05e-26 | 64 |
ectoderm-derived structure | 4.35e-26 | 95 |
ectoderm | 4.35e-26 | 95 |
presumptive ectoderm | 4.35e-26 | 95 |
regional part of nervous system | 3.98e-24 | 54 |
neural tube | 6.02e-23 | 52 |
neural rod | 6.02e-23 | 52 |
future spinal cord | 6.02e-23 | 52 |
neural keel | 6.02e-23 | 52 |
ecto-epithelium | 1.55e-21 | 73 |
pre-chordal neural plate | 1.57e-19 | 49 |
brain | 1.80e-19 | 47 |
future brain | 1.80e-19 | 47 |
gray matter | 4.24e-19 | 34 |
regional part of brain | 5.46e-19 | 46 |
structure with developmental contribution from neural crest | 2.23e-18 | 92 |
anterior neural tube | 1.05e-17 | 40 |
regional part of forebrain | 3.18e-17 | 39 |
forebrain | 3.18e-17 | 39 |
future forebrain | 3.18e-17 | 39 |
brain grey matter | 9.26e-16 | 29 |
regional part of telencephalon | 9.26e-16 | 29 |
telencephalon | 9.26e-16 | 29 |
cerebral cortex | 5.26e-11 | 21 |
cerebral hemisphere | 5.26e-11 | 21 |
pallium | 5.26e-11 | 21 |
regional part of cerebral cortex | 1.02e-08 | 17 |
occipital lobe | 4.44e-07 | 10 |
visual cortex | 4.44e-07 | 10 |
neocortex | 4.44e-07 | 10 |