FFCP PHASE1:Mm9::chr4:119330166..119330181,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1198|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:119330166..119330181,-|id=chr4:119330166..119330181,-|ontology_enrichment_celltype=CL:0000239!2.01e-15!6;CL:0000677!2.01e-15!6;CL:0000212!2.01e-15!6;CL:0000584!2.01e-15!6;CL:0002563!3.47e-13!9;CL:0002251!3.47e-13!9;CL:0000075!4.10e-13!7;CL:0000473!8.71e-09!3;CL:0000627!8.71e-09!3;CL:0000682!8.71e-09!3;CL:0000066!1.47e-08!25;CL:0002076!1.74e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,2.78e-16,3;CL:0000239,2.62e-14,6;CL:0000677,2.62e-14,6;CL:0000584,2.62e-14,6;CL:0000075,2.69e-12,7;CL:0000066,1.20e-09,25;CL:0002563,1.31e-09,9;CL:0002251,1.31e-09,9;CL:0000473,2.81e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.06e-31!43;UBERON:0000344!1.66e-22!15;UBERON:0005409!7.18e-21!59;UBERON:0001242!6.85e-18!13;UBERON:0000060!6.85e-18!13;UBERON:0001262!6.85e-18!13;UBERON:0004786!6.85e-18!13;UBERON:0004923!2.70e-15!24;UBERON:0003350!3.47e-13!9;UBERON:0004808!3.47e-13!9;UBERON:0001277!3.47e-13!9;UBERON:0000485!1.35e-10!11;UBERON:0004119!5.33e-09!130;UBERON:0000925!5.33e-09!130;UBERON:0006595!5.33e-09!130;UBERON:0001007!2.30e-08!128;UBERON:0001555!2.30e-08!128;UBERON:0007026!2.30e-08!128;UBERON:0004921!8.75e-07!126;UBERON:0004185!8.75e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.12e-16,15;UBERON:0000160,1.53e-15,31;UBERON:0001962,1.48e-11,2;UBERON:0001961,1.48e-11,2;UBERON:0001744,1.48e-11,2;UBERON:0001155,1.88e-11,2;UBERON:0000059,1.88e-11,2;UBERON:0004923,3.54e-10,24;UBERON:0001242,4.00e-10,13;UBERON:0001262,4.00e-10,13;UBERON:0004786,4.00e-10,13;UBERON:0005409,8.55e-10,47;UBERON:0003350,1.31e-09,9;UBERON:0004808,1.31e-09,9;UBERON:0001277,1.31e-09,9;UBERON:0002465,5.43e-08,3;UBERON:0000485,6.88e-08,11;UBERON:0006834,5.73e-07,1;UBERON:0003199,8.36e-07,1|phase1_expression=0,1.39590163055744,2.27499619694768,1.51232105653415,4.50806156951712,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,3.89995777814189,5.16808767703518,1.29228598847722,1.72376986148711,0.570070258369122,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.32225283331772,0,0,0,0,0,0.190225626112559,1.42358718463353,0.164698954724011,0.754005626400808,0.795825888164603,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.387043379778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:119330166..119330181,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1198 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:119330166..119330181,- | |||
|description=CAGE_peak_at_chr4:119330166..119330181,- | |||
|id=chr4:119330166..119330181,- | |||
|ontology_enrichment_celltype=CL:0000239!2.01e-15!6;CL:0000677!2.01e-15!6;CL:0000212!2.01e-15!6;CL:0000584!2.01e-15!6;CL:0002563!3.47e-13!9;CL:0002251!3.47e-13!9;CL:0000075!4.10e-13!7;CL:0000473!8.71e-09!3;CL:0000627!8.71e-09!3;CL:0000682!8.71e-09!3;CL:0000066!1.47e-08!25;CL:0002076!1.74e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.78e-16,3;CL:0000239,2.62e-14,6;CL:0000677,2.62e-14,6;CL:0000584,2.62e-14,6;CL:0000075,2.69e-12,7;CL:0000066,1.20e-09,25;CL:0002563,1.31e-09,9;CL:0002251,1.31e-09,9;CL:0000473,2.81e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.06e-31!43;UBERON:0000344!1.66e-22!15;UBERON:0005409!7.18e-21!59;UBERON:0001242!6.85e-18!13;UBERON:0000060!6.85e-18!13;UBERON:0001262!6.85e-18!13;UBERON:0004786!6.85e-18!13;UBERON:0004923!2.70e-15!24;UBERON:0003350!3.47e-13!9;UBERON:0004808!3.47e-13!9;UBERON:0001277!3.47e-13!9;UBERON:0000485!1.35e-10!11;UBERON:0004119!5.33e-09!130;UBERON:0000925!5.33e-09!130;UBERON:0006595!5.33e-09!130;UBERON:0001007!2.30e-08!128;UBERON:0001555!2.30e-08!128;UBERON:0007026!2.30e-08!128;UBERON:0004921!8.75e-07!126;UBERON:0004185!8.75e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.12e-16,15;UBERON:0000160,1.53e-15,31;UBERON:0001962,1.48e-11,2;UBERON:0001961,1.48e-11,2;UBERON:0001744,1.48e-11,2;UBERON:0001155,1.88e-11,2;UBERON:0000059,1.88e-11,2;UBERON:0004923,3.54e-10,24;UBERON:0001242,4.00e-10,13;UBERON:0001262,4.00e-10,13;UBERON:0004786,4.00e-10,13;UBERON:0005409,8.55e-10,47;UBERON:0003350,1.31e-09,9;UBERON:0004808,1.31e-09,9;UBERON:0001277,1.31e-09,9;UBERON:0002465,5.43e-08,3;UBERON:0000485,6.88e-08,11;UBERON:0006834,5.73e-07,1;UBERON:0003199,8.36e-07,1 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,1.51232105653415,4.50806156951712,0.671517087647559,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,3.89995777814189,5.16808767703518,1.29228598847722,1.72376986148711,0.570070258369122,0,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0,2.64335026387038,1.32225283331772,0,0,0,0,0,0.190225626112559,1.42358718463353,0.164698954724011,0.754005626400808,0.795825888164603,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0.302323556964751,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.387043379778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:119330166..119330181,- | |||
}} |
Latest revision as of 16:14, 4 August 2015
Short description: | p@chr4:119330166..119330181, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119330166..119330181, - |
Coexpression cluster: | MCL_coexpression_mm9:1198 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.78e-16 | 3 |
brush border epithelial cell | 2.62e-14 | 6 |
gut absorptive cell | 2.62e-14 | 6 |
enterocyte | 2.62e-14 | 6 |
columnar/cuboidal epithelial cell | 2.69e-12 | 7 |
epithelial cell | 1.20e-09 | 25 |
intestinal epithelial cell | 1.31e-09 | 9 |
epithelial cell of alimentary canal | 1.31e-09 | 9 |
defensive cell | 2.81e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.12e-16 | 15 |
intestine | 1.53e-15 | 31 |
gut-associated lymphoid tissue | 1.48e-11 | 2 |
mucosa-associated lymphoid tissue | 1.48e-11 | 2 |
lymphoid tissue | 1.48e-11 | 2 |
colon | 1.88e-11 | 2 |
large intestine | 1.88e-11 | 2 |
organ component layer | 3.54e-10 | 24 |
intestinal mucosa | 4.00e-10 | 13 |
wall of intestine | 4.00e-10 | 13 |
gastrointestinal system mucosa | 4.00e-10 | 13 |
gastrointestinal system | 8.55e-10 | 47 |
epithelium of mucosa | 1.31e-09 | 9 |
gastrointestinal system epithelium | 1.31e-09 | 9 |
intestinal epithelium | 1.31e-09 | 9 |
lymphoid system | 5.43e-08 | 3 |
simple columnar epithelium | 6.88e-08 | 11 |
uterus or analog | 5.73e-07 | 1 |
egg chamber | 8.36e-07 | 1 |