FFCP PHASE1:Mm9::chr4:134073503..134073512,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=751|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:134073503..134073512,-|id=chr4:134073503..134073512,-|ontology_enrichment_celltype=CL:0002610!7.07e-16!3;CL:0002614!2.39e-15!3;CL:0002494!4.13e-15!3;CL:0000737!4.13e-15!3;CL:0000746!4.13e-15!3;CL:0000513!4.13e-15!3;CL:0000393!5.13e-09!39;CL:0000211!5.13e-09!39;CL:0000680!8.39e-08!6;CL:0000183!8.39e-08!6;CL:0000187!8.39e-08!6;CL:0000056!8.39e-08!6;CL:0000117!2.30e-07!23;CL:0000337!2.30e-07!23;CL:0000222!9.50e-07!7;CL:0000055!9.59e-07!50|ontology_enrichment_celltype_v019_2=CL:0002610,1.18e-44,3;CL:0002614,4.86e-20,3;CL:0000117,2.72e-16,23;CL:0000337,2.72e-16,23;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0000540,1.68e-11,33;CL:0000047,1.68e-11,33;CL:0000031,1.68e-11,33;CL:0000404,1.68e-11,33;CL:0002319,6.37e-09,43;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44;CL:0002321,7.20e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004684!7.07e-16!3;UBERON:0002275!7.07e-16!3;UBERON:0002038!2.39e-15!3;UBERON:0002308!2.39e-15!3;UBERON:0009663!2.39e-15!3;UBERON:0009661!2.39e-15!3;UBERON:0006331!2.39e-15!3;UBERON:0000125!2.39e-15!3;UBERON:0002950!1.21e-11!4;UBERON:0001891!1.21e-11!4;UBERON:0009616!1.21e-11!4;UBERON:0002298!6.43e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.18e-44,3;UBERON:0002275,1.18e-44,3;UBERON:0002038,4.86e-20,3;UBERON:0009663,4.86e-20,3;UBERON:0009661,4.86e-20,3;UBERON:0000125,4.86e-20,3;UBERON:0002308,4.86e-20,3;UBERON:0002950,2.61e-15,4;UBERON:0001891,2.61e-15,4;UBERON:0009616,2.61e-15,4;UBERON:0010286,2.61e-15,4;UBERON:0002420,3.71e-08,8;UBERON:0007245,3.71e-08,8;UBERON:0010009,3.71e-08,8;UBERON:0010011,3.71e-08,8;UBERON:0000454,3.71e-08,8;UBERON:0000073,3.56e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,1.43266719969378,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,3.06449611404451,2.61131106535614,0,0,0,0.558365998002762,1.68828783009504,1.22238598221448,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:134073503..134073512,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=751 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:134073503..134073512,- | |||
|description=CAGE_peak_at_chr4:134073503..134073512,- | |||
|id=chr4:134073503..134073512,- | |||
|ontology_enrichment_celltype=CL:0002610!7.07e-16!3;CL:0002614!2.39e-15!3;CL:0002494!4.13e-15!3;CL:0000737!4.13e-15!3;CL:0000746!4.13e-15!3;CL:0000513!4.13e-15!3;CL:0000393!5.13e-09!39;CL:0000211!5.13e-09!39;CL:0000680!8.39e-08!6;CL:0000183!8.39e-08!6;CL:0000187!8.39e-08!6;CL:0000056!8.39e-08!6;CL:0000117!2.30e-07!23;CL:0000337!2.30e-07!23;CL:0000222!9.50e-07!7;CL:0000055!9.59e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.18e-44,3;CL:0002614,4.86e-20,3;CL:0000117,2.72e-16,23;CL:0000337,2.72e-16,23;CL:0000393,7.80e-14,39;CL:0000211,7.80e-14,39;CL:0000540,1.68e-11,33;CL:0000047,1.68e-11,33;CL:0000031,1.68e-11,33;CL:0000404,1.68e-11,33;CL:0002319,6.37e-09,43;CL:0000221,9.96e-09,44;CL:0000133,9.96e-09,44;CL:0002321,7.20e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!7.07e-16!3;UBERON:0002275!7.07e-16!3;UBERON:0002038!2.39e-15!3;UBERON:0002308!2.39e-15!3;UBERON:0009663!2.39e-15!3;UBERON:0009661!2.39e-15!3;UBERON:0006331!2.39e-15!3;UBERON:0000125!2.39e-15!3;UBERON:0002950!1.21e-11!4;UBERON:0001891!1.21e-11!4;UBERON:0009616!1.21e-11!4;UBERON:0002298!6.43e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.18e-44,3;UBERON:0002275,1.18e-44,3;UBERON:0002038,4.86e-20,3;UBERON:0009663,4.86e-20,3;UBERON:0009661,4.86e-20,3;UBERON:0000125,4.86e-20,3;UBERON:0002308,4.86e-20,3;UBERON:0002950,2.61e-15,4;UBERON:0001891,2.61e-15,4;UBERON:0009616,2.61e-15,4;UBERON:0010286,2.61e-15,4;UBERON:0002420,3.71e-08,8;UBERON:0007245,3.71e-08,8;UBERON:0010009,3.71e-08,8;UBERON:0010011,3.71e-08,8;UBERON:0000454,3.71e-08,8;UBERON:0000073,3.56e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,1.43266719969378,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20231761998777,3.06449611404451,2.61131106535614,0,0,0,0.558365998002762,1.68828783009504,1.22238598221448,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:134073503..134073512,- | |||
}} |
Latest revision as of 22:40, 4 August 2015
Short description: | p@chr4:134073503..134073512, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:134073503..134073512, - |
Coexpression cluster: | MCL_coexpression_mm9:751 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.18e-44 | 3 |
neuron of the substantia nigra | 4.86e-20 | 3 |
CNS neuron (sensu Vertebrata) | 2.72e-16 | 23 |
neuroblast (sensu Vertebrata) | 2.72e-16 | 23 |
electrically responsive cell | 7.80e-14 | 39 |
electrically active cell | 7.80e-14 | 39 |
neuron | 1.68e-11 | 33 |
neuronal stem cell | 1.68e-11 | 33 |
neuroblast | 1.68e-11 | 33 |
electrically signaling cell | 1.68e-11 | 33 |
neural cell | 6.37e-09 | 43 |
ectodermal cell | 9.96e-09 | 44 |
neurectodermal cell | 9.96e-09 | 44 |
embryonic cell | 7.20e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.18e-44 | 3 |
reticular formation | 1.18e-44 | 3 |
substantia nigra | 4.86e-20 | 3 |
telencephalic nucleus | 4.86e-20 | 3 |
midbrain nucleus | 4.86e-20 | 3 |
neural nucleus | 4.86e-20 | 3 |
nucleus of brain | 4.86e-20 | 3 |
regional part of midbrain | 2.61e-15 | 4 |
midbrain | 2.61e-15 | 4 |
presumptive midbrain | 2.61e-15 | 4 |
midbrain neural tube | 2.61e-15 | 4 |
basal ganglion | 3.71e-08 | 8 |
nuclear complex of neuraxis | 3.71e-08 | 8 |
aggregate regional part of brain | 3.71e-08 | 8 |
collection of basal ganglia | 3.71e-08 | 8 |
cerebral subcortex | 3.71e-08 | 8 |
regional part of nervous system | 3.56e-07 | 54 |