FFCP PHASE1:Mm9::chr4:148960541..148960620,+: Difference between revisions
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{{FFCP|EntrezGene=65945|HGNC=|MCL_coexpression_id=1|UniProt=Q9EPL2|association_with_transcript=0bp_to_ENSMUST00000105691_5end|description=CAGE_peak_1_at_Clstn1_5end|id=chr4:148960541..148960620,+|ontology_enrichment_celltype=CL:0000117!7.68e-11!23;CL:0000337!7.68e-11!23;CL:0000221!9.69e-11!44;CL:0000133!9.69e-11!44;CL:0002319!2.14e-10!43;CL:0000055!1.93e-09!50;CL:0002321!4.34e-09!70;CL:0000220!4.34e-09!70;CL:0000540!4.65e-07!33;CL:0000047!4.65e-07!33;CL:0000031!4.65e-07!33;CL:0000404!4.65e-07!33;CL:0000393!7.85e-07!39;CL:0000211!7.85e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,7.67e-11,23;CL:0000337,7.67e-11,23;CL:0000221,9.69e-11,44;CL:0000133,9.69e-11,44;CL:0002319,2.14e-10,43;CL:0002321,4.43e-09,70;CL:0000540,4.64e-07,33;CL:0000047,4.64e-07,33;CL:0000031,4.64e-07,33;CL:0000404,4.64e-07,33;CL:0000393,7.84e-07,39;CL:0000211,7.84e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!5.59e-26!63;UBERON:0000073!1.11e-25!75;UBERON:0001016!1.11e-25!75;UBERON:0001017!1.16e-25!73;UBERON:0005743!1.16e-25!73;UBERON:0004121!6.67e-25!102;UBERON:0000924!6.67e-25!102;UBERON:0006601!6.67e-25!102;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!2.21e-23!50;UBERON:0006238!2.21e-23!50;UBERON:0002616!6.58e-23!49;UBERON:0002346!1.34e-20!71;UBERON:0003075!1.34e-20!71;UBERON:0007284!1.34e-20!71;UBERON:0003056!8.59e-19!49;UBERON:0002020!3.23e-18!34;UBERON:0003080!1.37e-17!40;UBERON:0002780!5.74e-17!39;UBERON:0001890!5.74e-17!39;UBERON:0006240!5.74e-17!39;UBERON:0002791!1.87e-15!29;UBERON:0003528!1.87e-15!29;UBERON:0001893!1.87e-15!29;UBERON:0007811!6.45e-14!86;UBERON:0000153!5.99e-13!94;UBERON:0000956!1.00e-11!21;UBERON:0001869!1.00e-11!21;UBERON:0000203!1.00e-11!21;UBERON:0002619!1.64e-10!17;UBERON:0002021!3.37e-08!10;UBERON:0000411!3.37e-08!10;UBERON:0001950!3.37e-08!10;UBERON:0003076!1.95e-07!12;UBERON:0003057!1.95e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.79e-28,95;UBERON:0000924,6.79e-28,95;UBERON:0006601,6.79e-28,95;UBERON:0000073,6.57e-26,54;UBERON:0001016,1.11e-25,75;UBERON:0001017,1.16e-25,73;UBERON:0010371,2.00e-24,73;UBERON:0001049,2.10e-24,52;UBERON:0005068,2.10e-24,52;UBERON:0006241,2.10e-24,52;UBERON:0007135,2.10e-24,52;UBERON:0002346,3.23e-24,64;UBERON:0003075,3.23e-24,64;UBERON:0007284,3.23e-24,64;UBERON:0000955,2.50e-21,47;UBERON:0006238,2.50e-21,47;UBERON:0002616,7.31e-21,46;UBERON:0003056,8.58e-19,49;UBERON:0002020,3.22e-18,34;UBERON:0003080,1.37e-17,40;UBERON:0002780,5.73e-17,39;UBERON:0001890,5.73e-17,39;UBERON:0006240,5.73e-17,39;UBERON:0003528,1.86e-15,29;UBERON:0002791,1.86e-15,29;UBERON:0001893,1.86e-15,29;UBERON:0010314,9.20e-14,92;UBERON:0000956,1.00e-11,21;UBERON:0001869,1.00e-11,21;UBERON:0000203,1.00e-11,21;UBERON:0002619,1.63e-10,17;UBERON:0011216,4.78e-09,194;UBERON:0002021,3.37e-08,10;UBERON:0000411,3.37e-08,10;UBERON:0001950,3.37e-08,10;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12|phase1_expression=102.495262147068,101.551843623054,98.7348349475293,320.007135562626,337.603721983838,90.8226861043324,96.2484079253566,9.42600261123507,3.09735188733667,2.34064526321993,5.99262888789267,7.17949430958028,3.59521532855532,4.54586092578786,2.99798785634096,3.03712901084739,2.09868563438444,2.20823515750766,4.11343300817216,2.12194825899015,121.186688465274,8.73760370567791,9.66439219814061,63.5169918489824,62.1699151692031,84.412098724908,79.2602072932698,56.0225204983311,149.35840769271,141.640932925081,58.980315834311,0.635030673459631,0.61506478758457,0,45.0608526811988,40.7274881128306,47.7756293653944,0,0,0.523523743973798,0,0,0,96.0592721153655,101.275554288295,61.671708726325,255.059578257461,291.281608924277,402.904459135021,407.136208661549,133.827019073847,251.5669876387,1.51004345451963,11.6057942721815,9.41062637598899,67.1447128053822,73.066027184383,62.911995257848,233.068562910257,234.343003817511,292.196277016349,96.5706916397026,127.169155843893,36.8958884085374,44.4989863155138,49.0231279312809,176.46446509534,237.831130994042,110.014678659295,136.220991776676,127.87757650164,368.489769880907,331.081942886469,113.793952470692,99.4875989169293,134.205942845063,408.529918507732,447.033370636242,418.424196590007,200.071498486704,201.730254143313,175.026892507071,408.165544540019,253.805937124288,319.348337853533,330.278644315981,298.126299593322,262.264020276198,96.1722655331437,71.9441252216598,52.7553369437054,11.185510400758,0,4.85732872474035,2.59910566979068,0.896053774194671,64.4639888404741,77.2049361278602,57.412707017234,63.2477838373509,149.998242062165,111.644035350457,163.075353412253,191.988009851399,100.018860947181,95.5166692841122,106.665657898119,58.0054108972825,18.9024655062435,82.0885029028481,44.0652729985985,45.0608907901969,43.1250979868829,38.2835507003661,49.387256996996,55.6702999590462,12.8541383221874,61.0209286202027,21.230653246797,47.3976870345909,21.2007857721978,24.2437626567611,143.521656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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:65945 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9EPL2 | |||
|association_with_transcript=0bp_to_ENSMUST00000105691_5end | |||
|cluster_id=chr4:148960541..148960620,+ | |||
|description=CAGE_peak_1_at_Clstn1_5end | |||
|id=chr4:148960541..148960620,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.68e-11!23;CL:0000337!7.68e-11!23;CL:0000221!9.69e-11!44;CL:0000133!9.69e-11!44;CL:0002319!2.14e-10!43;CL:0000055!1.93e-09!50;CL:0002321!4.34e-09!70;CL:0000220!4.34e-09!70;CL:0000540!4.65e-07!33;CL:0000047!4.65e-07!33;CL:0000031!4.65e-07!33;CL:0000404!4.65e-07!33;CL:0000393!7.85e-07!39;CL:0000211!7.85e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.67e-11,23;CL:0000337,7.67e-11,23;CL:0000221,9.69e-11,44;CL:0000133,9.69e-11,44;CL:0002319,2.14e-10,43;CL:0002321,4.43e-09,70;CL:0000540,4.64e-07,33;CL:0000047,4.64e-07,33;CL:0000031,4.64e-07,33;CL:0000404,4.64e-07,33;CL:0000393,7.84e-07,39;CL:0000211,7.84e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.59e-26!63;UBERON:0000073!1.11e-25!75;UBERON:0001016!1.11e-25!75;UBERON:0001017!1.16e-25!73;UBERON:0005743!1.16e-25!73;UBERON:0004121!6.67e-25!102;UBERON:0000924!6.67e-25!102;UBERON:0006601!6.67e-25!102;UBERON:0001049!2.10e-24!52;UBERON:0005068!2.10e-24!52;UBERON:0006241!2.10e-24!52;UBERON:0007135!2.10e-24!52;UBERON:0000955!2.21e-23!50;UBERON:0006238!2.21e-23!50;UBERON:0002616!6.58e-23!49;UBERON:0002346!1.34e-20!71;UBERON:0003075!1.34e-20!71;UBERON:0007284!1.34e-20!71;UBERON:0003056!8.59e-19!49;UBERON:0002020!3.23e-18!34;UBERON:0003080!1.37e-17!40;UBERON:0002780!5.74e-17!39;UBERON:0001890!5.74e-17!39;UBERON:0006240!5.74e-17!39;UBERON:0002791!1.87e-15!29;UBERON:0003528!1.87e-15!29;UBERON:0001893!1.87e-15!29;UBERON:0007811!6.45e-14!86;UBERON:0000153!5.99e-13!94;UBERON:0000956!1.00e-11!21;UBERON:0001869!1.00e-11!21;UBERON:0000203!1.00e-11!21;UBERON:0002619!1.64e-10!17;UBERON:0002021!3.37e-08!10;UBERON:0000411!3.37e-08!10;UBERON:0001950!3.37e-08!10;UBERON:0003076!1.95e-07!12;UBERON:0003057!1.95e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.79e-28,95;UBERON:0000924,6.79e-28,95;UBERON:0006601,6.79e-28,95;UBERON:0000073,6.57e-26,54;UBERON:0001016,1.11e-25,75;UBERON:0001017,1.16e-25,73;UBERON:0010371,2.00e-24,73;UBERON:0001049,2.10e-24,52;UBERON:0005068,2.10e-24,52;UBERON:0006241,2.10e-24,52;UBERON:0007135,2.10e-24,52;UBERON:0002346,3.23e-24,64;UBERON:0003075,3.23e-24,64;UBERON:0007284,3.23e-24,64;UBERON:0000955,2.50e-21,47;UBERON:0006238,2.50e-21,47;UBERON:0002616,7.31e-21,46;UBERON:0003056,8.58e-19,49;UBERON:0002020,3.22e-18,34;UBERON:0003080,1.37e-17,40;UBERON:0002780,5.73e-17,39;UBERON:0001890,5.73e-17,39;UBERON:0006240,5.73e-17,39;UBERON:0003528,1.86e-15,29;UBERON:0002791,1.86e-15,29;UBERON:0001893,1.86e-15,29;UBERON:0010314,9.20e-14,92;UBERON:0000956,1.00e-11,21;UBERON:0001869,1.00e-11,21;UBERON:0000203,1.00e-11,21;UBERON:0002619,1.63e-10,17;UBERON:0011216,4.78e-09,194;UBERON:0002021,3.37e-08,10;UBERON:0000411,3.37e-08,10;UBERON:0001950,3.37e-08,10;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12 | |||
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| |||
|short_description=p1@Clstn1 | |||
}} |
Revision as of 04:50, 5 August 2015
Short description: | p1@Clstn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clstn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000105691_5end |
EntrezGene: | 65945 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.67e-11 | 23 |
neuroblast (sensu Vertebrata) | 7.67e-11 | 23 |
ectodermal cell | 9.69e-11 | 44 |
neurectodermal cell | 9.69e-11 | 44 |
neural cell | 2.14e-10 | 43 |
embryonic cell | 4.43e-09 | 70 |
neuron | 4.64e-07 | 33 |
neuronal stem cell | 4.64e-07 | 33 |
neuroblast | 4.64e-07 | 33 |
electrically signaling cell | 4.64e-07 | 33 |
electrically responsive cell | 7.84e-07 | 39 |
electrically active cell | 7.84e-07 | 39 |