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FFCP PHASE1:Mm9::chr4:6917793..6917809,-: Difference between revisions

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{{FFCP|EntrezGene=252838|HGNC=|UniProt=B1AUN4,Q66JW3|association_with_transcript=60bp_to_NM_145711,uc008rxs.2_5end|description=CAGE_peak_5_at_Tox_5end|id=chr4:6917793..6917809,-|ontology_enrichment_celltype=CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0000540!2.36e-12!33;CL:0000047!2.36e-12!33;CL:0000031!2.36e-12!33;CL:0000404!2.36e-12!33;CL:0000393!1.08e-08!39;CL:0000211!1.08e-08!39;CL:0000221!8.17e-08!44;CL:0000133!8.17e-08!44;CL:0002319!2.51e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.44e-14,23;CL:0000337,3.44e-14,23;CL:0000540,4.92e-10,33;CL:0000047,4.92e-10,33;CL:0000031,4.92e-10,33;CL:0000404,4.92e-10,33;CL:0000393,7.15e-08,39;CL:0000211,7.15e-08,39;CL:0000221,1.34e-07,44;CL:0000133,1.34e-07,44;CL:0002609,1.72e-07,6;CL:0002613,6.04e-07,3;CL:0002319,8.83e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!7.58e-18!86;UBERON:0000153!3.30e-16!94;UBERON:0000033!8.16e-16!63;UBERON:0001017!2.39e-15!73;UBERON:0005743!2.39e-15!73;UBERON:0003056!7.94e-15!49;UBERON:0002020!3.20e-14!34;UBERON:0000073!3.48e-14!75;UBERON:0001016!3.48e-14!75;UBERON:0001049!1.80e-12!52;UBERON:0005068!1.80e-12!52;UBERON:0006241!1.80e-12!52;UBERON:0007135!1.80e-12!52;UBERON:0002346!1.84e-12!71;UBERON:0003075!1.84e-12!71;UBERON:0007284!1.84e-12!71;UBERON:0000955!3.42e-12!50;UBERON:0006238!3.42e-12!50;UBERON:0004121!4.34e-12!102;UBERON:0000924!4.34e-12!102;UBERON:0006601!4.34e-12!102;UBERON:0002791!4.40e-12!29;UBERON:0003528!4.40e-12!29;UBERON:0001893!4.40e-12!29;UBERON:0002780!6.39e-12!39;UBERON:0001890!6.39e-12!39;UBERON:0006240!6.39e-12!39;UBERON:0003080!7.40e-12!40;UBERON:0002616!1.14e-11!49;UBERON:0000956!8.12e-10!21;UBERON:0001869!8.12e-10!21;UBERON:0000203!8.12e-10!21;UBERON:0002619!1.79e-07!17;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.42e-20,34;UBERON:0003528,2.84e-20,29;UBERON:0002791,2.84e-20,29;UBERON:0001893,2.84e-20,29;UBERON:0003056,1.06e-18,49;UBERON:0000956,2.45e-18,21;UBERON:0001869,2.45e-18,21;UBERON:0000203,2.45e-18,21;UBERON:0002346,1.66e-16,64;UBERON:0003075,1.66e-16,64;UBERON:0007284,1.66e-16,64;UBERON:0000073,9.90e-16,54;UBERON:0004121,1.30e-15,95;UBERON:0000924,1.30e-15,95;UBERON:0006601,1.30e-15,95;UBERON:0002780,3.68e-15,39;UBERON:0001890,3.68e-15,39;UBERON:0006240,3.68e-15,39;UBERON:0010371,8.90e-15,73;UBERON:0003080,1.23e-14,40;UBERON:0001017,3.44e-14,73;UBERON:0001016,1.34e-13,75;UBERON:0002021,2.61e-13,10;UBERON:0000411,2.61e-13,10;UBERON:0001950,2.61e-13,10;UBERON:0000955,6.03e-13,47;UBERON:0006238,6.03e-13,47;UBERON:0002619,7.70e-13,17;UBERON:0001049,2.12e-12,52;UBERON:0005068,2.12e-12,52;UBERON:0006241,2.12e-12,52;UBERON:0007135,2.12e-12,52;UBERON:0002616,5.58e-12,46;UBERON:0010314,4.45e-10,92;UBERON:0000483,7.70e-08,174;UBERON:0000119,1.23e-07,176|phase1_expression=0.960893082628764,0,0,1.20985684522732,0,0.503637815735669,0.233612640595526,1.67860320474049,0.985521055061667,1.17032263160997,0.513653904676515,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0.340173160604279,0.695036658406197,0.522399578277871,0.319984845586813,0,0,0,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,2.02196133825892,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0.725362142011344,0.672187598284928,0,0.286533439938757,0,2.02316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,3.21437798156281,2.16009501330705,1.68259969081106,0.571301968807607,1.54607978666129,0.979926393719632,1.24599112323707,1.83843757322004,1.10115880999389,1.78762273319263,1.84327839907492,3.03338461779446,3.01909223887952,5.2091337055676,0.837548997004143,0.56276261003168,0.61119299110724,1.76777151284201,0.996601765593721,0.931997229126503,0,0,0.289864488701678,0,2.03991400112325,0,0,0.896053774194671,0.140444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.299581278809645,0,1.00523481690292,1.04294592115366,1.27857728665165,0.20778804455956,0.811206315338788,0.305518091550949,0.248813941220186,0,0,0.390361328888111,0.919608417733892,1.0803727788321,1.9591626318643,3.94611695077702,3.84341160854549,3.65436725782942,0.517406741478031,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.720248245844059,0,0,0,0,0.268273401399619,0.583826711835847,0,0.164167464079095,0,0,0,0,0.630869845692382,2.26390147234426,0,0.528901133327089,0.426576501070468,0,0.644337306610467,0.80673409849337,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0.648414149624083,0.597423819763102,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:252838
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:B1AUN4,uniprot:Q66JW3
|association_with_transcript=60bp_to_NM_145711,uc008rxs.2_5end
|cluster_id=chr4:6917793..6917809,-
|description=CAGE_peak_5_at_Tox_5end
|id=chr4:6917793..6917809,-
|ontology_enrichment_celltype=CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0000540!2.36e-12!33;CL:0000047!2.36e-12!33;CL:0000031!2.36e-12!33;CL:0000404!2.36e-12!33;CL:0000393!1.08e-08!39;CL:0000211!1.08e-08!39;CL:0000221!8.17e-08!44;CL:0000133!8.17e-08!44;CL:0002319!2.51e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.44e-14,23;CL:0000337,3.44e-14,23;CL:0000540,4.92e-10,33;CL:0000047,4.92e-10,33;CL:0000031,4.92e-10,33;CL:0000404,4.92e-10,33;CL:0000393,7.15e-08,39;CL:0000211,7.15e-08,39;CL:0000221,1.34e-07,44;CL:0000133,1.34e-07,44;CL:0002609,1.72e-07,6;CL:0002613,6.04e-07,3;CL:0002319,8.83e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!7.58e-18!86;UBERON:0000153!3.30e-16!94;UBERON:0000033!8.16e-16!63;UBERON:0001017!2.39e-15!73;UBERON:0005743!2.39e-15!73;UBERON:0003056!7.94e-15!49;UBERON:0002020!3.20e-14!34;UBERON:0000073!3.48e-14!75;UBERON:0001016!3.48e-14!75;UBERON:0001049!1.80e-12!52;UBERON:0005068!1.80e-12!52;UBERON:0006241!1.80e-12!52;UBERON:0007135!1.80e-12!52;UBERON:0002346!1.84e-12!71;UBERON:0003075!1.84e-12!71;UBERON:0007284!1.84e-12!71;UBERON:0000955!3.42e-12!50;UBERON:0006238!3.42e-12!50;UBERON:0004121!4.34e-12!102;UBERON:0000924!4.34e-12!102;UBERON:0006601!4.34e-12!102;UBERON:0002791!4.40e-12!29;UBERON:0003528!4.40e-12!29;UBERON:0001893!4.40e-12!29;UBERON:0002780!6.39e-12!39;UBERON:0001890!6.39e-12!39;UBERON:0006240!6.39e-12!39;UBERON:0003080!7.40e-12!40;UBERON:0002616!1.14e-11!49;UBERON:0000956!8.12e-10!21;UBERON:0001869!8.12e-10!21;UBERON:0000203!8.12e-10!21;UBERON:0002619!1.79e-07!17;UBERON:0002021!3.06e-07!10;UBERON:0000411!3.06e-07!10;UBERON:0001950!3.06e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.42e-20,34;UBERON:0003528,2.84e-20,29;UBERON:0002791,2.84e-20,29;UBERON:0001893,2.84e-20,29;UBERON:0003056,1.06e-18,49;UBERON:0000956,2.45e-18,21;UBERON:0001869,2.45e-18,21;UBERON:0000203,2.45e-18,21;UBERON:0002346,1.66e-16,64;UBERON:0003075,1.66e-16,64;UBERON:0007284,1.66e-16,64;UBERON:0000073,9.90e-16,54;UBERON:0004121,1.30e-15,95;UBERON:0000924,1.30e-15,95;UBERON:0006601,1.30e-15,95;UBERON:0002780,3.68e-15,39;UBERON:0001890,3.68e-15,39;UBERON:0006240,3.68e-15,39;UBERON:0010371,8.90e-15,73;UBERON:0003080,1.23e-14,40;UBERON:0001017,3.44e-14,73;UBERON:0001016,1.34e-13,75;UBERON:0002021,2.61e-13,10;UBERON:0000411,2.61e-13,10;UBERON:0001950,2.61e-13,10;UBERON:0000955,6.03e-13,47;UBERON:0006238,6.03e-13,47;UBERON:0002619,7.70e-13,17;UBERON:0001049,2.12e-12,52;UBERON:0005068,2.12e-12,52;UBERON:0006241,2.12e-12,52;UBERON:0007135,2.12e-12,52;UBERON:0002616,5.58e-12,46;UBERON:0010314,4.45e-10,92;UBERON:0000483,7.70e-08,174;UBERON:0000119,1.23e-07,176
|phase1_expression=0.960893082628764,0,0,1.20985684522732,0,0.503637815735669,0.233612640595526,1.67860320474049,0.985521055061667,1.17032263160997,0.513653904676515,0,0.342401459862411,0.174840804837995,0,0,0,0,0,0,0.340173160604279,0.695036658406197,0.522399578277871,0.319984845586813,0,0,0,0.861884930743556,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,2.02196133825892,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0.725362142011344,0.672187598284928,0,0.286533439938757,0,2.02316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,0,3.21437798156281,2.16009501330705,1.68259969081106,0.571301968807607,1.54607978666129,0.979926393719632,1.24599112323707,1.83843757322004,1.10115880999389,1.78762273319263,1.84327839907492,3.03338461779446,3.01909223887952,5.2091337055676,0.837548997004143,0.56276261003168,0.61119299110724,1.76777151284201,0.996601765593721,0.931997229126503,0,0,0.289864488701678,0,2.03991400112325,0,0,0.896053774194671,0.140444420131752,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0.299581278809645,0,1.00523481690292,1.04294592115366,1.27857728665165,0.20778804455956,0.811206315338788,0.305518091550949,0.248813941220186,0,0,0.390361328888111,0.919608417733892,1.0803727788321,1.9591626318643,3.94611695077702,3.84341160854549,3.65436725782942,0.517406741478031,0,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.720248245844059,0,0,0,0,0.268273401399619,0.583826711835847,0,0.164167464079095,0,0,0,0,0.630869845692382,2.26390147234426,0,0.528901133327089,0.426576501070468,0,0.644337306610467,0.80673409849337,0.444756087689741,0.190225626112559,0,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0.648414149624083,0.597423819763102,0,0.342745537829186,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0,0,0.162135226775035,0.274561413188081,0,1.11642284300551,0,0.757736633841335,0,0,0.184753190166605,0,0,0.169745085775188,0,0.335012514883631,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,0,0,0,1.29254038639679,0.955875191810208,0.222798674082394,0.566153061577665,0.809621403349789,0.584511715822624,0.395287777946524,1.60660658210904,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0.295301892880773,0.307435147943927,1.03371317267288,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0.177340233642274,0.356737635204141,0.658196082408484,1.2178597964584,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0.582961673259701,0.741701208042039,0,0.206386867963223,0.555583582109135,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0,0.134864346384821,0.495920734352016,0,0.518459893167171,0.621339313086926,0.56369293868419,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0.911430693907651,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.410843828659309,0.389762468933385,0.179026695667481,0.79472541912506,1.56254084375959,1.03382669022204,2.1202954489111,1.06689529317,1.61321896218945,1.16949456887703,0.769694733122636,0.701261413089414,0,0,0,0,0,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,1.20297227640581,2.74033007908257,0.755393897389701,2.02506750069542,2.2516060161211,1.81256963593682,1.03552062350364,0.830298780673413,0.399024873401031,1.02440163452481,0.486213434136588,0.209613162627982,0.183843508450014,0.666740183404846,0.412070114477788,0,1.01078884705519,0.25347929989024,0.188626341386076,0.561849044819294,0.512201219238954,0.631790158511746,0,0.463537303779422,0.964546102318525,0,0.588795680537589,0.342869252385415,0.177475806159338,0.238436189947321,0,0.470546902076653,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0.355905054372522,0.492522411877817,1.22769312950907,0.929621047115796,0.964533054905707,0.999242311751784,0,0.214871054048298,0,0,0.463735671240843
|short_description=p5@Tox
}}

Revision as of 17:10, 5 August 2015

Short description:p5@Tox
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tox_5end
Coexpression cluster:NA
Association with transcript: 60bp_to_NM_145711, uc008rxs.2_5end
EntrezGene:252838
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tox

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C63.95
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.07
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.42e-2034
brain grey matter2.84e-2029
regional part of telencephalon2.84e-2029
telencephalon2.84e-2029
pre-chordal neural plate1.06e-1849
cerebral cortex2.45e-1821
cerebral hemisphere2.45e-1821
pallium2.45e-1821
neurectoderm1.66e-1664
neural plate1.66e-1664
presumptive neural plate1.66e-1664
regional part of nervous system9.90e-1654
ectoderm-derived structure1.30e-1595
ectoderm1.30e-1595
presumptive ectoderm1.30e-1595
regional part of forebrain3.68e-1539
forebrain3.68e-1539
future forebrain3.68e-1539
ecto-epithelium8.90e-1573
anterior neural tube1.23e-1440
central nervous system3.44e-1473
nervous system1.34e-1375
occipital lobe2.61e-1310
visual cortex2.61e-1310
neocortex2.61e-1310
brain6.03e-1347
future brain6.03e-1347
regional part of cerebral cortex7.70e-1317
neural tube2.12e-1252
neural rod2.12e-1252
future spinal cord2.12e-1252
neural keel2.12e-1252
regional part of brain5.58e-1246
structure with developmental contribution from neural crest4.45e-1092
epithelium7.70e-08174
cell layer1.23e-07176
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