FFCP PHASE1:Mm9::chr6:113145320..113145356,-: Difference between revisions
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{{FFCP|EntrezGene=269788|HGNC=|MCL_coexpression_id=13|UniProt=Q5U4E0|association_with_transcript=21bp_to_ENSMUST00000060787,ENSMUST00000162280,NM_177763,uc009dev.1_5end|description=CAGE_peak_1_at_Lhfpl4_5end|id=chr6:113145320..113145356,-|ontology_enrichment_celltype=CL:0000221!1.41e-17!44;CL:0000133!1.41e-17!44;CL:0002319!2.70e-17!43;CL:0000540!6.42e-17!33;CL:0000047!6.42e-17!33;CL:0000031!6.42e-17!33;CL:0000404!6.42e-17!33;CL:0000117!2.03e-16!23;CL:0000337!2.03e-16!23;CL:0000055!1.27e-14!50;CL:0000393!1.40e-14!39;CL:0000211!1.40e-14!39|ontology_enrichment_celltype_v019_2=CL:0000540,1.31e-20,33;CL:0000047,1.31e-20,33;CL:0000031,1.31e-20,33;CL:0000404,1.31e-20,33;CL:0000117,1.74e-20,23;CL:0000337,1.74e-20,23;CL:0000221,3.15e-20,44;CL:0000133,3.15e-20,44;CL:0002319,7.23e-20,43;CL:0000393,6.92e-18,39;CL:0000211,6.92e-18,39;CL:0002321,1.08e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.62e-35!75;UBERON:0001016!2.62e-35!75;UBERON:0001017!3.18e-35!73;UBERON:0005743!3.18e-35!73;UBERON:0004121!6.62e-33!102;UBERON:0000924!6.62e-33!102;UBERON:0006601!6.62e-33!102;UBERON:0002346!1.22e-31!71;UBERON:0003075!1.22e-31!71;UBERON:0007284!1.22e-31!71;UBERON:0000033!1.81e-27!63;UBERON:0001049!7.17e-27!52;UBERON:0005068!7.17e-27!52;UBERON:0006241!7.17e-27!52;UBERON:0007135!7.17e-27!52;UBERON:0000955!3.07e-25!50;UBERON:0006238!3.07e-25!50;UBERON:0002616!1.13e-24!49;UBERON:0003056!2.09e-24!49;UBERON:0003080!4.98e-21!40;UBERON:0002020!1.52e-20!34;UBERON:0002780!1.97e-20!39;UBERON:0001890!1.97e-20!39;UBERON:0006240!1.97e-20!39;UBERON:0002791!5.99e-17!29;UBERON:0003528!5.99e-17!29;UBERON:0001893!5.99e-17!29;UBERON:0007811!5.65e-12!86;UBERON:0000956!2.08e-11!21;UBERON:0001869!2.08e-11!21;UBERON:0000203!2.08e-11!21;UBERON:0000153!1.67e-10!94;UBERON:0002619!2.74e-09!17;UBERON:0002021!6.56e-07!10;UBERON:0000411!6.56e-07!10;UBERON:0001950!6.56e-07!10;UBERON:0002420!7.10e-07!8;UBERON:0007245!7.10e-07!8;UBERON:0010009!7.10e-07!8;UBERON:0010011!7.10e-07!8;UBERON:0000454!7.10e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-43,73;UBERON:0001016,1.47e-42,75;UBERON:0004121,6.73e-40,95;UBERON:0000924,6.73e-40,95;UBERON:0006601,6.73e-40,95;UBERON:0002346,1.07e-38,64;UBERON:0003075,1.07e-38,64;UBERON:0007284,1.07e-38,64;UBERON:0000073,2.26e-35,54;UBERON:0010371,2.53e-33,73;UBERON:0001049,2.72e-33,52;UBERON:0005068,2.72e-33,52;UBERON:0006241,2.72e-33,52;UBERON:0007135,2.72e-33,52;UBERON:0003056,9.12e-30,49;UBERON:0000955,1.61e-28,47;UBERON:0006238,1.61e-28,47;UBERON:0002616,8.18e-28,46;UBERON:0003080,1.89e-25,40;UBERON:0010314,3.19e-25,92;UBERON:0002020,8.94e-25,34;UBERON:0002780,1.08e-24,39;UBERON:0001890,1.08e-24,39;UBERON:0006240,1.08e-24,39;UBERON:0003528,3.20e-20,29;UBERON:0002791,3.20e-20,29;UBERON:0001893,3.20e-20,29;UBERON:0000956,3.16e-13,21;UBERON:0001869,3.16e-13,21;UBERON:0000203,3.16e-13,21;UBERON:0002619,1.50e-10,17;UBERON:0002021,2.23e-08,10;UBERON:0000411,2.23e-08,10;UBERON:0001950,2.23e-08,10;UBERON:0002420,2.46e-08,8;UBERON:0007245,2.46e-08,8;UBERON:0010009,2.46e-08,8;UBERON:0010011,2.46e-08,8;UBERON:0000454,2.46e-08,8;UBERON:0003076,4.43e-08,12;UBERON:0003057,4.43e-08,12|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,1.62203089951223,1.10128051297009,0,4.79655344036982,0.659058548203415,1.1665793944457,1.39986421625363,7.18762821824858,0.167782606057736,0,0,0.257259436035947,0,0,40.8679250936388,49.7251520515711,42.466704034914,0.338844532069132,0,0,0,0,3.89480143673926,8.06858441175265,20.3231640124616,22.0059679480656,19.7705463670299,38.2772319101097,28.9337788646614,20.8234358665422,27.3159592401974,24.8189072384706,25.3266526298594,31.6664598451266,30.5677001179925,42.7311572245828,51.4160557045542,34.9011958273029,32.6644108831616,35.4540444319958,39.5747461741938,37.1232017696821,33.3149733069901,33.9246991402047,0.832988126665025,1.51143120213571,0,0,0,0.539703191637817,0.649776417447669,0,1.40444420131752,3.40860645156115,1.29893002301434,1.7666978725517,3.52108549441701,0,0,0,0,0,0,0.91347103775248,0,2.22663208597237,1.90833859442749,2.74018930480927,1.61430848079241,0.904335843315735,2.3517741427141,0.251333182659351,0,0.578397427679647,0,0,0.220841518460394,0.484875253135222,0,22.5441213698891,25.3430515244281,0,0,0,0,22.1690146319138,26.992535566299,27.1413400563787,23.9877561865342,23.0143911597297,17.8697718321222,20.6046404096052,0.305518091550949,0,0,3.57751155007006,1.56144531555244,5.51765050640335,3.60124259610698,5.87748789559289,9.5251098811859,10.7615525039274,11.1505052226077,9.05461797586555,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0.324275238183423,0.292399974850665,0.219550115291051,0.268412837520744,18.5055154736432,18.8315440654091,0,0,0.4265765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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:269788 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5U4E0 | |||
|association_with_transcript=21bp_to_ENSMUST00000060787,ENSMUST00000162280,NM_177763,uc009dev.1_5end | |||
|cluster_id=chr6:113145320..113145356,- | |||
|description=CAGE_peak_1_at_Lhfpl4_5end | |||
|id=chr6:113145320..113145356,- | |||
|ontology_enrichment_celltype=CL:0000221!1.41e-17!44;CL:0000133!1.41e-17!44;CL:0002319!2.70e-17!43;CL:0000540!6.42e-17!33;CL:0000047!6.42e-17!33;CL:0000031!6.42e-17!33;CL:0000404!6.42e-17!33;CL:0000117!2.03e-16!23;CL:0000337!2.03e-16!23;CL:0000055!1.27e-14!50;CL:0000393!1.40e-14!39;CL:0000211!1.40e-14!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.31e-20,33;CL:0000047,1.31e-20,33;CL:0000031,1.31e-20,33;CL:0000404,1.31e-20,33;CL:0000117,1.74e-20,23;CL:0000337,1.74e-20,23;CL:0000221,3.15e-20,44;CL:0000133,3.15e-20,44;CL:0002319,7.23e-20,43;CL:0000393,6.92e-18,39;CL:0000211,6.92e-18,39;CL:0002321,1.08e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.62e-35!75;UBERON:0001016!2.62e-35!75;UBERON:0001017!3.18e-35!73;UBERON:0005743!3.18e-35!73;UBERON:0004121!6.62e-33!102;UBERON:0000924!6.62e-33!102;UBERON:0006601!6.62e-33!102;UBERON:0002346!1.22e-31!71;UBERON:0003075!1.22e-31!71;UBERON:0007284!1.22e-31!71;UBERON:0000033!1.81e-27!63;UBERON:0001049!7.17e-27!52;UBERON:0005068!7.17e-27!52;UBERON:0006241!7.17e-27!52;UBERON:0007135!7.17e-27!52;UBERON:0000955!3.07e-25!50;UBERON:0006238!3.07e-25!50;UBERON:0002616!1.13e-24!49;UBERON:0003056!2.09e-24!49;UBERON:0003080!4.98e-21!40;UBERON:0002020!1.52e-20!34;UBERON:0002780!1.97e-20!39;UBERON:0001890!1.97e-20!39;UBERON:0006240!1.97e-20!39;UBERON:0002791!5.99e-17!29;UBERON:0003528!5.99e-17!29;UBERON:0001893!5.99e-17!29;UBERON:0007811!5.65e-12!86;UBERON:0000956!2.08e-11!21;UBERON:0001869!2.08e-11!21;UBERON:0000203!2.08e-11!21;UBERON:0000153!1.67e-10!94;UBERON:0002619!2.74e-09!17;UBERON:0002021!6.56e-07!10;UBERON:0000411!6.56e-07!10;UBERON:0001950!6.56e-07!10;UBERON:0002420!7.10e-07!8;UBERON:0007245!7.10e-07!8;UBERON:0010009!7.10e-07!8;UBERON:0010011!7.10e-07!8;UBERON:0000454!7.10e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-43,73;UBERON:0001016,1.47e-42,75;UBERON:0004121,6.73e-40,95;UBERON:0000924,6.73e-40,95;UBERON:0006601,6.73e-40,95;UBERON:0002346,1.07e-38,64;UBERON:0003075,1.07e-38,64;UBERON:0007284,1.07e-38,64;UBERON:0000073,2.26e-35,54;UBERON:0010371,2.53e-33,73;UBERON:0001049,2.72e-33,52;UBERON:0005068,2.72e-33,52;UBERON:0006241,2.72e-33,52;UBERON:0007135,2.72e-33,52;UBERON:0003056,9.12e-30,49;UBERON:0000955,1.61e-28,47;UBERON:0006238,1.61e-28,47;UBERON:0002616,8.18e-28,46;UBERON:0003080,1.89e-25,40;UBERON:0010314,3.19e-25,92;UBERON:0002020,8.94e-25,34;UBERON:0002780,1.08e-24,39;UBERON:0001890,1.08e-24,39;UBERON:0006240,1.08e-24,39;UBERON:0003528,3.20e-20,29;UBERON:0002791,3.20e-20,29;UBERON:0001893,3.20e-20,29;UBERON:0000956,3.16e-13,21;UBERON:0001869,3.16e-13,21;UBERON:0000203,3.16e-13,21;UBERON:0002619,1.50e-10,17;UBERON:0002021,2.23e-08,10;UBERON:0000411,2.23e-08,10;UBERON:0001950,2.23e-08,10;UBERON:0002420,2.46e-08,8;UBERON:0007245,2.46e-08,8;UBERON:0010009,2.46e-08,8;UBERON:0010011,2.46e-08,8;UBERON:0000454,2.46e-08,8;UBERON:0003076,4.43e-08,12;UBERON:0003057,4.43e-08,12 | |||
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,1.25896817975577,1.62203089951223,1.10128051297009,0,4.79655344036982,0.659058548203415,1.1665793944457,1.39986421625363,7.18762821824858,0.167782606057736,0,0,0.257259436035947,0,0,40.8679250936388,49.7251520515711,42.466704034914,0.338844532069132,0,0,0,0,3.89480143673926,8.06858441175265,20.3231640124616,22.0059679480656,19.7705463670299,38.2772319101097,28.9337788646614,20.8234358665422,27.3159592401974,24.8189072384706,25.3266526298594,31.6664598451266,30.5677001179925,42.7311572245828,51.4160557045542,34.9011958273029,32.6644108831616,35.4540444319958,39.5747461741938,37.1232017696821,33.3149733069901,33.9246991402047,0.832988126665025,1.51143120213571,0,0,0,0.539703191637817,0.649776417447669,0,1.40444420131752,3.40860645156115,1.29893002301434,1.7666978725517,3.52108549441701,0,0,0,0,0,0,0.91347103775248,0,2.22663208597237,1.90833859442749,2.74018930480927,1.61430848079241,0.904335843315735,2.3517741427141,0.251333182659351,0,0.578397427679647,0,0,0.220841518460394,0.484875253135222,0,22.5441213698891,25.3430515244281,0,0,0,0,22.1690146319138,26.992535566299,27.1413400563787,23.9877561865342,23.0143911597297,17.8697718321222,20.6046404096052,0.305518091550949,0,0,3.57751155007006,1.56144531555244,5.51765050640335,3.60124259610698,5.87748789559289,9.5251098811859,10.7615525039274,11.1505052226077,9.05461797586555,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0.324275238183423,0.292399974850665,0.219550115291051,0.268412837520744,18.5055154736432,18.8315440654091,0,0,0.426576501070468,1.62565670302307,0.77320476793256,0.605050573870028,0.444756087689741,0.760902504450237,0,0.494096864172033,0.251335208800269,0.795825888164603,0.779856348476481,0,0,0.398282546508734,0.189667900953082,0.571242563048644,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.630540576424764,0.44292937929755,0.478364305972461,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,16.3761601787548,15.3547309435786,0,0.252470927204373,1.89304931649754,2.34263246577983,2.80050417052639,0.238968797952552,1.78238939265915,4.24614796183249,1.61924280669958,1.46127928955656,3.16230222357219,18.6366363524648,0.283880170416537,0.178065603667255,0.651547837414304,0.164970122972535,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,0,9.53230896110606,3.06103859853227,4.52755393239641,3.21505552547388,2.30542303734956,5.35106452806212,4.60737257685939,10.0473433207818,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0.119372344003136,0,0,17.2445530869774,0.170870880797853,0,0,0,0,0,0,0,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0.418176592028937,0.655087691238533,0.539457385539283,0.41326727862668,0.26175594198403,0.388844919875379,0,1.69107881605257,0.299033092087958,0,0,0.129159823477731,0,0.469428954583016,0,0.104859344425711,1.20792060413003,0.288030006257865,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,28.8023439734704,21.1749608793301,28.6447756719698,23.5438859810852,27.4033007908257,18.1294535373528,23.6257875081132,16.6618845192962,20.3914084042892,22.2636934053283,4.04770655578289,6.3843979744165,4.95127456686989,3.16038732188782,4.61148957781561,3.30918315210025,1.77797382241292,1.23621034343337,7.70206103020357,3.53776096469316,2.28131369901216,4.52703219326583,4.02658482120494,4.73786127796033,5.68611142660571,1.90517476513229,4.28772005995965,3.27945674788299,4.53294490883637,3.97437084362873,3.08582327146874,3.37204031702741,2.62279808942053,1.88950341622027,2.72917203204459,2.79228206042532,3.29270351170991,1.8414879800649,2.03706170768793,2.24456908663095,3.32178050747688,3.74317033027141,3.27384834535751,4.18329471202108,3.08650577569826,11.4912865851455,1.40358965067245,4.72716318906256,1.14772999241306,1.10295709559758,0.463735671240843 | |||
|short_description=p1@Lhfpl4 | |||
}} |
Revision as of 21:49, 4 August 2015
Short description: | p1@Lhfpl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lhfpl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 21bp_to_ENSMUST00000060787, ENSMUST00000162280, NM_177763, uc009dev.1_5end |
EntrezGene: | 269788 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.31e-20 | 33 |
neuronal stem cell | 1.31e-20 | 33 |
neuroblast | 1.31e-20 | 33 |
electrically signaling cell | 1.31e-20 | 33 |
CNS neuron (sensu Vertebrata) | 1.74e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.74e-20 | 23 |
ectodermal cell | 3.15e-20 | 44 |
neurectodermal cell | 3.15e-20 | 44 |
neural cell | 7.23e-20 | 43 |
electrically responsive cell | 6.92e-18 | 39 |
electrically active cell | 6.92e-18 | 39 |
embryonic cell | 1.08e-08 | 70 |