FFCP PHASE1:Mm9::chr6:113433292..113433310,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=171508|HGNC=|MCL_coexpression_id=1995|UniProt=Q91XD7|association_with_transcript=1bp_to_ENSMUST00000032422_5end|description=CAGE_peak_6_at_Creld1_5end|id=chr6:113433292..113433310,+|ontology_enrichment_celltype=CL:0000540!3.94e-16!33;CL:0000047!3.94e-16!33;CL:0000031!3.94e-16!33;CL:0000404!3.94e-16!33;CL:0000221!4.60e-15!44;CL:0000133!4.60e-15!44;CL:0000117!7.75e-15!23;CL:0000337!7.75e-15!23;CL:0002319!1.01e-14!43;CL:0000393!3.39e-12!39;CL:0000211!3.39e-12!39;CL:0000055!6.74e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.60e-24,33;CL:0000047,6.60e-24,33;CL:0000031,6.60e-24,33;CL:0000404,6.60e-24,33;CL:0000117,1.31e-22,23;CL:0000337,1.31e-22,23;CL:0000393,1.55e-19,39;CL:0000211,1.55e-19,39;CL:0000221,7.37e-19,44;CL:0000133,7.37e-19,44;CL:0002319,2.47e-18,43;CL:0002321,8.09e-09,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.23e-30!75;UBERON:0001016!6.23e-30!75;UBERON:0001017!6.49e-30!73;UBERON:0005743!6.49e-30!73;UBERON:0004121!1.62e-28!102;UBERON:0000924!1.62e-28!102;UBERON:0006601!1.62e-28!102;UBERON:0002346!5.29e-26!71;UBERON:0003075!5.29e-26!71;UBERON:0007284!5.29e-26!71;UBERON:0000033!4.10e-25!63;UBERON:0001049!9.08e-23!52;UBERON:0005068!9.08e-23!52;UBERON:0006241!9.08e-23!52;UBERON:0007135!9.08e-23!52;UBERON:0003056!1.89e-21!49;UBERON:0000955!1.97e-21!50;UBERON:0006238!1.97e-21!50;UBERON:0002616!4.05e-21!49;UBERON:0003080!2.22e-18!40;UBERON:0002780!8.67e-18!39;UBERON:0001890!8.67e-18!39;UBERON:0006240!8.67e-18!39;UBERON:0007811!1.12e-17!86;UBERON:0002020!1.34e-16!34;UBERON:0000153!1.84e-14!94;UBERON:0002791!1.49e-13!29;UBERON:0003528!1.49e-13!29;UBERON:0001893!1.49e-13!29;UBERON:0000956!6.08e-09!21;UBERON:0001869!6.08e-09!21;UBERON:0000203!6.08e-09!21;UBERON:0002619!9.53e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-43,73;UBERON:0001016,1.77e-41,75;UBERON:0004121,2.79e-39,95;UBERON:0000924,2.79e-39,95;UBERON:0006601,2.79e-39,95;UBERON:0002346,8.43e-38,64;UBERON:0003075,8.43e-38,64;UBERON:0007284,8.43e-38,64;UBERON:0000073,3.70e-36,54;UBERON:0001049,1.37e-33,52;UBERON:0005068,1.37e-33,52;UBERON:0006241,1.37e-33,52;UBERON:0007135,1.37e-33,52;UBERON:0010371,3.71e-33,73;UBERON:0010314,7.36e-33,92;UBERON:0003056,2.16e-30,49;UBERON:0000955,1.25e-28,47;UBERON:0006238,1.25e-28,47;UBERON:0002616,3.85e-28,46;UBERON:0003080,7.55e-27,40;UBERON:0002780,6.45e-26,39;UBERON:0001890,6.45e-26,39;UBERON:0006240,6.45e-26,39;UBERON:0002020,4.21e-25,34;UBERON:0003528,2.85e-20,29;UBERON:0002791,2.85e-20,29;UBERON:0001893,2.85e-20,29;UBERON:0000956,5.47e-13,21;UBERON:0001869,5.47e-13,21;UBERON:0000203,5.47e-13,21;UBERON:0000025,7.89e-12,114;UBERON:0004111,4.05e-11,122;UBERON:0002619,1.53e-09,17;UBERON:0002420,1.09e-08,8;UBERON:0007245,1.09e-08,8;UBERON:0010009,1.09e-08,8;UBERON:0010011,1.09e-08,8;UBERON:0000454,1.09e-08,8;UBERON:0000483,1.72e-08,174;UBERON:0000119,3.55e-08,176;UBERON:0002021,1.84e-07,10;UBERON:0000411,1.84e-07,10;UBERON:0001950,1.84e-07,10;UBERON:0003076,4.18e-07,12;UBERON:0003057,4.18e-07,12|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.903863264091034,0,0,0,0,0.513602189793617,0.611942816932982,0.333109761815663,0.202475267389826,0,0.788655413395594,0.137114433605739,0,0.595303031057488,0.198581902401771,0,0.95995453676044,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0.101376931219515,0.183546752161682,0,0.872100625521786,0.659058548203415,0.388859798148567,0.279972843250725,2.87505128729943,0.503347818173209,0,1.00828139742739,0,0.286533439938757,1.03134418455488,3.23706337375356,5.28990979272033,3.1691570175309,0,0.889294796111139,0.449949858640699,0,0,1.49800055259202,0.768436610643109,4.25127410464758,4.18518408828241,2.94454945891935,5.14171771926846,4.19650227808066,2.9397791811589,1.43768206527355,10.1114066527102,8.8092704799511,2.68143409978894,2.30409799884365,4.74790635828698,2.65314166446988,4.16730696445408,3.62937898701795,4.50210088025344,2.75036845998258,2.06240009831567,3.13217697758026,4.47358669980721,0.832988126665025,0.755715601067855,1.15945795480671,0,0,0,0,0,0.702222100658759,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0.517875767294343,0.148442139064825,1.04091196059682,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.125666591329675,0.494389935468748,0,0,1.13236794963186,0.662524555381181,0.969750506270444,0,1.75668478206928,3.14170060220183,0.255457055208591,0.359445373517761,0,0.127070227073065,2.99581278809645,2.74500361691176,3.01570445070875,2.60736480288415,5.37002460393694,1.87009240103604,2.27137768294861,0.305518091550949,0.622034853050465,0.505445516867349,0.841767423545896,0.390361328888111,1.83921683546778,1.98068342785884,1.50704817835715,2.24520447199382,2.562274405697,3.18585863503078,2.84573707812917,0.215567992932842,0,0.351902248327898,0,0,0.696504333044333,0,0.199034266818493,0,0,0.568326998791185,2.27838349789052,0.469052119962192,0.540186184383045,0.946978942340841,1.77087808572663,0.771335564436891,0.930135779001631,0.536546802799238,1.16765342367169,0.987359099480883,0.492502392237286,1.29710095273369,1.02339991197733,1.3173006917463,1.07365135008297,3.15434922846191,2.57261530948211,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,0,0.329397909448022,0,0.397912944082302,0.779856348476481,0,0,0.199141273254367,1.32767530667157,0.456994050438915,0,1.01825663922657,0.969762435838129,0.49095073923223,0.379419222745544,0.442830443938806,0.156998727841375,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0,0.837531287209079,0,0.195133647857799,0,0.44292937929755,0.478364305972461,0.655453258862952,0.172684981865896,0,0,0,0,0,2.24770825982909,2.69586879162067,0,0.757412781613119,0.631016438832513,1.56175497718655,1.29254038639679,0.238968797952552,1.33679204449436,1.41538265394416,1.21443210502468,1.75353514746787,1.58115111178609,1.28528526568723,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0.242780636154981,0.906970670894253,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,2.38307724027652,0.900305470156551,1.29358683782755,1.50035924522115,3.72414490648775,1.60531935841864,2.46823530903181,4.56697423671899,0.23467170806371,0.847328283455281,0.441056796109924,0,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,1.11255181206306,0.512612642393558,0.412773735926445,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0.279902904647316,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.540026704109006,0,0.655087691238533,0.539457385539283,0.165306911450672,0,0,0.621339313086926,1.12738587736838,0.149516546043979,0.496375471371293,1.36115831840833,0.258319646955462,0.168956125490778,0.58678619322877,0.13020438484395,0.838874755405687,0.724752362478018,0.576060012515731,0.948033361884535,0.810900861160657,0.102710957164827,0.129920822977795,0.537080087002444,0.993406773906324,0.360586348559907,0.295379054349154,1.11063094942962,1.82896335972,0.907435666231565,0.292373642219257,0.481059208201647,1.16876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0,2.82375921308533,3.68260189205742,2.29158205375759,3.78077001156113,6.85082519770642,1.5107877947794,2.02506750069542,3.15224842256954,0,2.07104124700728,0.103787347584177,0.399024873401031,1.19513524027894,0.972426868273176,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,0.962757628775446,2.27427490587418,1.01391719956096,1.13175804831646,0.561849044819294,0.768301828858431,0.804096565378586,0.476293691283074,0.579421629724277,1.15745532278223,0.824171801606613,1.03039244094078,0.342869252385415,1.06485483695602,0.238436189947321,1.16277133305863,0.376437521661322,0.846146078916765,0.914639864363863,1.05227884575137,0.950628796921032,0,0.711810108745045,0.886540341380071,1.63692417267876,0.464810523557898,0.385813221962283,1.24905288968973,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,1.62307484934295|short_description=p6@Creld1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:171508 | |||
|HGNC= | |||
|MCL_coexpression_id=1995 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91XD7 | |||
|association_with_transcript=1bp_to_ENSMUST00000032422_5end | |||
|cluster_id=chr6:113433292..113433310,+ | |||
|description=CAGE_peak_6_at_Creld1_5end | |||
|id=chr6:113433292..113433310,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.94e-16!33;CL:0000047!3.94e-16!33;CL:0000031!3.94e-16!33;CL:0000404!3.94e-16!33;CL:0000221!4.60e-15!44;CL:0000133!4.60e-15!44;CL:0000117!7.75e-15!23;CL:0000337!7.75e-15!23;CL:0002319!1.01e-14!43;CL:0000393!3.39e-12!39;CL:0000211!3.39e-12!39;CL:0000055!6.74e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.60e-24,33;CL:0000047,6.60e-24,33;CL:0000031,6.60e-24,33;CL:0000404,6.60e-24,33;CL:0000117,1.31e-22,23;CL:0000337,1.31e-22,23;CL:0000393,1.55e-19,39;CL:0000211,1.55e-19,39;CL:0000221,7.37e-19,44;CL:0000133,7.37e-19,44;CL:0002319,2.47e-18,43;CL:0002321,8.09e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.23e-30!75;UBERON:0001016!6.23e-30!75;UBERON:0001017!6.49e-30!73;UBERON:0005743!6.49e-30!73;UBERON:0004121!1.62e-28!102;UBERON:0000924!1.62e-28!102;UBERON:0006601!1.62e-28!102;UBERON:0002346!5.29e-26!71;UBERON:0003075!5.29e-26!71;UBERON:0007284!5.29e-26!71;UBERON:0000033!4.10e-25!63;UBERON:0001049!9.08e-23!52;UBERON:0005068!9.08e-23!52;UBERON:0006241!9.08e-23!52;UBERON:0007135!9.08e-23!52;UBERON:0003056!1.89e-21!49;UBERON:0000955!1.97e-21!50;UBERON:0006238!1.97e-21!50;UBERON:0002616!4.05e-21!49;UBERON:0003080!2.22e-18!40;UBERON:0002780!8.67e-18!39;UBERON:0001890!8.67e-18!39;UBERON:0006240!8.67e-18!39;UBERON:0007811!1.12e-17!86;UBERON:0002020!1.34e-16!34;UBERON:0000153!1.84e-14!94;UBERON:0002791!1.49e-13!29;UBERON:0003528!1.49e-13!29;UBERON:0001893!1.49e-13!29;UBERON:0000956!6.08e-09!21;UBERON:0001869!6.08e-09!21;UBERON:0000203!6.08e-09!21;UBERON:0002619!9.53e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.10e-43,73;UBERON:0001016,1.77e-41,75;UBERON:0004121,2.79e-39,95;UBERON:0000924,2.79e-39,95;UBERON:0006601,2.79e-39,95;UBERON:0002346,8.43e-38,64;UBERON:0003075,8.43e-38,64;UBERON:0007284,8.43e-38,64;UBERON:0000073,3.70e-36,54;UBERON:0001049,1.37e-33,52;UBERON:0005068,1.37e-33,52;UBERON:0006241,1.37e-33,52;UBERON:0007135,1.37e-33,52;UBERON:0010371,3.71e-33,73;UBERON:0010314,7.36e-33,92;UBERON:0003056,2.16e-30,49;UBERON:0000955,1.25e-28,47;UBERON:0006238,1.25e-28,47;UBERON:0002616,3.85e-28,46;UBERON:0003080,7.55e-27,40;UBERON:0002780,6.45e-26,39;UBERON:0001890,6.45e-26,39;UBERON:0006240,6.45e-26,39;UBERON:0002020,4.21e-25,34;UBERON:0003528,2.85e-20,29;UBERON:0002791,2.85e-20,29;UBERON:0001893,2.85e-20,29;UBERON:0000956,5.47e-13,21;UBERON:0001869,5.47e-13,21;UBERON:0000203,5.47e-13,21;UBERON:0000025,7.89e-12,114;UBERON:0004111,4.05e-11,122;UBERON:0002619,1.53e-09,17;UBERON:0002420,1.09e-08,8;UBERON:0007245,1.09e-08,8;UBERON:0010009,1.09e-08,8;UBERON:0010011,1.09e-08,8;UBERON:0000454,1.09e-08,8;UBERON:0000483,1.72e-08,174;UBERON:0000119,3.55e-08,176;UBERON:0002021,1.84e-07,10;UBERON:0000411,1.84e-07,10;UBERON:0001950,1.84e-07,10;UBERON:0003076,4.18e-07,12;UBERON:0003057,4.18e-07,12 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.903863264091034,0,0,0,0,0.513602189793617,0.611942816932982,0.333109761815663,0.202475267389826,0,0.788655413395594,0.137114433605739,0,0.595303031057488,0.198581902401771,0,0.95995453676044,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0.101376931219515,0.183546752161682,0,0.872100625521786,0.659058548203415,0.388859798148567,0.279972843250725,2.87505128729943,0.503347818173209,0,1.00828139742739,0,0.286533439938757,1.03134418455488,3.23706337375356,5.28990979272033,3.1691570175309,0,0.889294796111139,0.449949858640699,0,0,1.49800055259202,0.768436610643109,4.25127410464758,4.18518408828241,2.94454945891935,5.14171771926846,4.19650227808066,2.9397791811589,1.43768206527355,10.1114066527102,8.8092704799511,2.68143409978894,2.30409799884365,4.74790635828698,2.65314166446988,4.16730696445408,3.62937898701795,4.50210088025344,2.75036845998258,2.06240009831567,3.13217697758026,4.47358669980721,0.832988126665025,0.755715601067855,1.15945795480671,0,0,0,0,0,0.702222100658759,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0.506719730950197,0,0.68510327831436,0.517875767294343,0.148442139064825,1.04091196059682,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.125666591329675,0.494389935468748,0,0,1.13236794963186,0.662524555381181,0.969750506270444,0,1.75668478206928,3.14170060220183,0.255457055208591,0.359445373517761,0,0.127070227073065,2.99581278809645,2.74500361691176,3.01570445070875,2.60736480288415,5.37002460393694,1.87009240103604,2.27137768294861,0.305518091550949,0.622034853050465,0.505445516867349,0.841767423545896,0.390361328888111,1.83921683546778,1.98068342785884,1.50704817835715,2.24520447199382,2.562274405697,3.18585863503078,2.84573707812917,0.215567992932842,0,0.351902248327898,0,0,0.696504333044333,0,0.199034266818493,0,0,0.568326998791185,2.27838349789052,0.469052119962192,0.540186184383045,0.946978942340841,1.77087808572663,0.771335564436891,0.930135779001631,0.536546802799238,1.16765342367169,0.987359099480883,0.492502392237286,1.29710095273369,1.02339991197733,1.3173006917463,1.07365135008297,3.15434922846191,2.57261530948211,0,0.264450566663544,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,0,0.329397909448022,0,0.397912944082302,0.779856348476481,0,0,0.199141273254367,1.32767530667157,0.456994050438915,0,1.01825663922657,0.969762435838129,0.49095073923223,0.379419222745544,0.442830443938806,0.156998727841375,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.554259570499814,0.189491411770485,0.325929952884052,0,0,0.837531287209079,0,0.195133647857799,0,0.44292937929755,0.478364305972461,0.655453258862952,0.172684981865896,0,0,0,0,0,2.24770825982909,2.69586879162067,0,0.757412781613119,0.631016438832513,1.56175497718655,1.29254038639679,0.238968797952552,1.33679204449436,1.41538265394416,1.21443210502468,1.75353514746787,1.58115111178609,1.28528526568723,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0.242780636154981,0.906970670894253,0.377210159511796,0.295301892880773,0.307435147943927,0.775284879504663,0,0,0.316036757935816,0,0,2.38307724027652,0.900305470156551,1.29358683782755,1.50035924522115,3.72414490648775,1.60531935841864,2.46823530903181,4.56697423671899,0.23467170806371,0.847328283455281,0.441056796109924,0,0.322928853391811,0.301564624640779,0.119372344003136,0.164140899745061,0,1.11255181206306,0.512612642393558,0.412773735926445,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0.279902904647316,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.540026704109006,0,0.655087691238533,0.539457385539283,0.165306911450672,0,0,0.621339313086926,1.12738587736838,0.149516546043979,0.496375471371293,1.36115831840833,0.258319646955462,0.168956125490778,0.58678619322877,0.13020438484395,0.838874755405687,0.724752362478018,0.576060012515731,0.948033361884535,0.810900861160657,0.102710957164827,0.129920822977795,0.537080087002444,0.993406773906324,0.360586348559907,0.295379054349154,1.11063094942962,1.82896335972,0.907435666231565,0.292373642219257,0.481059208201647,1.16876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0,2.82375921308533,3.68260189205742,2.29158205375759,3.78077001156113,6.85082519770642,1.5107877947794,2.02506750069542,3.15224842256954,0,2.07104124700728,0.103787347584177,0.399024873401031,1.19513524027894,0.972426868273176,1.04806581313991,0.919217542250071,0.888986911206461,1.03017528619447,0.962757628775446,2.27427490587418,1.01391719956096,1.13175804831646,0.561849044819294,0.768301828858431,0.804096565378586,0.476293691283074,0.579421629724277,1.15745532278223,0.824171801606613,1.03039244094078,0.342869252385415,1.06485483695602,0.238436189947321,1.16277133305863,0.376437521661322,0.846146078916765,0.914639864363863,1.05227884575137,0.950628796921032,0,0.711810108745045,0.886540341380071,1.63692417267876,0.464810523557898,0.385813221962283,1.24905288968973,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,1.62307484934295 | |||
|short_description=p6@Creld1 | |||
}} |
Revision as of 22:09, 4 August 2015
Short description: | p6@Creld1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Creld1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1995 |
Association with transcript: | 1bp_to_ENSMUST00000032422_5end |
EntrezGene: | 171508 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.60e-24 | 33 |
neuronal stem cell | 6.60e-24 | 33 |
neuroblast | 6.60e-24 | 33 |
electrically signaling cell | 6.60e-24 | 33 |
CNS neuron (sensu Vertebrata) | 1.31e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.31e-22 | 23 |
electrically responsive cell | 1.55e-19 | 39 |
electrically active cell | 1.55e-19 | 39 |
ectodermal cell | 7.37e-19 | 44 |
neurectodermal cell | 7.37e-19 | 44 |
neural cell | 2.47e-18 | 43 |
embryonic cell | 8.09e-09 | 70 |