FFCP PHASE1:Hg19::chr9:3898804..3898817,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr9:3898804..3898817,- | |||
|id=chr9:3898804..3898817,- | |||
|ontology_enrichment_celltype=CL:0002494!1.48e-18!16;CL:0002595!4.52e-14!5;CL:0000359!1.05e-13!32;CL:0002592!2.07e-13!3;CL:0000187!7.27e-12!54;CL:0000192!7.73e-12!42;CL:0000514!7.73e-12!42;CL:0000680!4.50e-11!57;CL:0000056!4.50e-11!57;CL:0000355!4.50e-11!57;CL:0000183!1.36e-10!59;CL:0002548!1.92e-10!6;CL:0000393!2.31e-10!60;CL:0000211!2.31e-10!60;CL:0002593!9.70e-10!2;CL:0000222!6.72e-08!119;CL:0000055!5.12e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002593;3.93e-37;2!CL:0002595;4.30e-33;5!CL:0002592;7.01e-25;3!CL:0000359;7.57e-21;32!CL:0002591;2.71e-19;1!CL:0000192;1.35e-11;43!CL:0002582;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,6.83e-37,2;CL:0002595,6.67e-33,5;CL:0002592,7.02e-25,3;CL:0000359,4.44e-20,32;CL:0002591,2.71e-19,1;CL:0000192,6.27e-15,43;CL:0000514,6.27e-15,43;CL:0000187,1.20e-11,55;CL:0000680,4.88e-11,58;CL:0000056,4.88e-11,58;CL:0000355,4.88e-11,58;CL:0000393,1.73e-10,61;CL:0000211,1.73e-10,61;CL:0002582,2.19e-07,3;CL:0000222,6.02e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.35e-11;43 | |||
|ontology_enrichment_disease=DOID:2394!8.58e-17!14;DOID:3493!4.85e-09!2;DOID:120!4.34e-08!27;DOID:193!1.91e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0000948!5.31e-25!24;UBERON:0005498!5.31e-25!24;UBERON:0004140!5.31e-25!24;UBERON:0009881!5.31e-25!24;UBERON:0004141!5.31e-25!24;UBERON:0003084!5.31e-25!24;UBERON:0007005!5.31e-25!24;UBERON:0004139!5.31e-25!24;UBERON:0004291!5.31e-25!24;UBERON:0007100!6.74e-22!27;UBERON:0003498!1.07e-20!5;UBERON:0005985!1.07e-20!5;UBERON:0004872!1.01e-17!84;UBERON:0001637!4.94e-16!42;UBERON:0003509!4.94e-16!42;UBERON:0004572!4.94e-16!42;UBERON:0004573!1.65e-15!33;UBERON:0004571!1.65e-15!33;UBERON:0003834!4.52e-14!5;UBERON:0001533!4.52e-14!5;UBERON:0004535!1.24e-13!110;UBERON:0001621!2.07e-13!3;UBERON:0001009!3.99e-13!113;UBERON:0003914!4.20e-11!118;UBERON:0003103!5.55e-11!69;UBERON:0001981!2.89e-10!60;UBERON:0007500!2.89e-10!60;UBERON:0004537!2.89e-10!60;UBERON:0006965!2.89e-10!60;UBERON:0001134!3.85e-10!61;UBERON:0002036!3.85e-10!61;UBERON:0003082!3.85e-10!61;UBERON:0002456!9.70e-10!2;UBERON:0002385!1.01e-09!63;UBERON:0001015!1.01e-09!63;UBERON:0000383!1.01e-09!63;UBERON:0007497!5.05e-09!2;UBERON:0003643!5.05e-09!2;UBERON:0003504!5.05e-09!2;UBERON:0003469!5.05e-09!2;UBERON:0003496!5.05e-09!2;UBERON:0004797!5.05e-09!2;UBERON:0002012!5.05e-09!2;UBERON:0008886!5.05e-09!2;UBERON:0007303!5.05e-09!2;UBERON:0002061!5.05e-09!2;UBERON:0005432!5.05e-09!2;UBERON:0004363!5.05e-09!2;UBERON:0003513!8.48e-09!8;UBERON:0000055!1.58e-08!69;UBERON:0004290!1.93e-08!70;UBERON:0002049!3.20e-08!79;UBERON:0007798!3.20e-08!79;UBERON:0000486!7.17e-08!82;UBERON:0002118!1.36e-07!5;UBERON:0004532!1.36e-07!5;UBERON:0000992!2.80e-07!13;UBERON:0001048!6.13e-07!168;UBERON:0000025!6.63e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;3.93e-37;2!UBERON:0003834;4.30e-33;5!UBERON:0001533;4.30e-33;5!UBERON:0003498;7.01e-25;3!UBERON:0005985;7.01e-25;3!UBERON:0001621;7.01e-25;3!UBERON:0003513;7.14e-24;7!UBERON:0001637;3.05e-11;42!UBERON:0003509;3.05e-11;42!UBERON:0004572;3.05e-11;42!UBERON:0004573;3.88e-11;33!UBERON:0004571;3.88e-11;33!UBERON:0000078;2.48e-10;2!UBERON:0002012;2.48e-10;2!UBERON:0008886;2.48e-10;2!UBERON:0002114;2.63e-07;2!UBERON:0007500;3.84e-07;56!UBERON:0001981;3.84e-07;56!UBERON:0004537;3.84e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,6.83e-37,2;UBERON:0003834,6.67e-33,5;UBERON:0001533,6.67e-33,5;UBERON:0003498,7.44e-33,5;UBERON:0005985,7.44e-33,5;UBERON:0001621,7.02e-25,3;UBERON:0003513,9.77e-24,7;UBERON:0001637,2.76e-15,42;UBERON:0003509,2.76e-15,42;UBERON:0004572,2.76e-15,42;UBERON:0004573,1.01e-13,33;UBERON:0004571,1.01e-13,33;UBERON:0007500,7.55e-11,59;UBERON:0001981,7.55e-11,59;UBERON:0004537,7.55e-11,59;UBERON:0006965,7.55e-11,59;UBERON:0000078,2.49e-10,2;UBERON:0007497,2.49e-10,2;UBERON:0003643,2.49e-10,2;UBERON:0003504,2.49e-10,2;UBERON:0003469,2.49e-10,2;UBERON:0003496,2.49e-10,2;UBERON:0002012,2.49e-10,2;UBERON:0008886,2.49e-10,2;UBERON:0007303,2.49e-10,2;UBERON:0002061,2.49e-10,2;UBERON:0005432,2.49e-10,2;UBERON:0004363,2.49e-10,2;UBERON:0001134,2.57e-10,62;UBERON:0002036,2.57e-10,62;UBERON:0003082,2.57e-10,62;UBERON:0002385,5.47e-10,64;UBERON:0001015,5.47e-10,64;UBERON:0000383,5.47e-10,64;UBERON:0000055,2.17e-09,68;UBERON:0002329,5.50e-09,71;UBERON:0003059,5.50e-09,71;UBERON:0007282,5.50e-09,71;UBERON:0004290,5.50e-09,71;UBERON:0009618,5.50e-09,71;UBERON:0003077,7.37e-09,72;UBERON:0007285,7.37e-09,72;UBERON:0007524,9.80e-09,73;UBERON:0002049,3.66e-08,78;UBERON:0007503,3.66e-08,78;UBERON:0007798,3.66e-08,78;UBERON:0000486,1.17e-07,83;UBERON:0004872,1.17e-07,83;UBERON:0000948,2.30e-07,24;UBERON:0005498,2.30e-07,24;UBERON:0004140,2.30e-07,24;UBERON:0009881,2.30e-07,24;UBERON:0004141,2.30e-07,24;UBERON:0003084,2.30e-07,24;UBERON:0007005,2.30e-07,24;UBERON:0004139,2.30e-07,24;UBERON:0004291,2.30e-07,24;UBERON:0004145,2.63e-07,3;UBERON:0002114,2.97e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01091240786658,1.58510321173008,0.421258456238981,0,2.19342140668156,1.05650146756755,0,0,1.13008116620243,1.10273068709225,0,0.876901770507525,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970817393606503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,0,0.155262956876259,0,0.265841714557995,0,0.751288044986092,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,9.26576229865248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:3898804..3898817,- | |||
}} |
Revision as of 00:38, 23 January 2014
Short description: | p@chr9:3898804..3898817, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:3898804..3898817, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 6.83e-37 | 2 |
smooth muscle cell of the subclavian artery | 6.67e-33 | 5 |
smooth muscle cell of the coronary artery | 7.02e-25 | 3 |
vascular associated smooth muscle cell | 4.44e-20 | 32 |
smooth muscle cell of the pulmonary artery | 2.71e-19 | 1 |
smooth muscle cell | 6.27e-15 | 43 |
smooth muscle myoblast | 6.27e-15 | 43 |
muscle cell | 1.20e-11 | 55 |
muscle precursor cell | 4.88e-11 | 58 |
myoblast | 4.88e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.88e-11 | 58 |
electrically responsive cell | 1.73e-10 | 61 |
electrically active cell | 1.73e-10 | 61 |
visceral preadipocyte | 2.19e-07 | 3 |
mesodermal cell | 6.02e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.43e-10 | 2 |