FFCP PHASE1:Mm9::chr6:54516320..54516407,-: Difference between revisions
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{{FFCP|EntrezGene=69938|HGNC=|MCL_coexpression_id=13|UniProt=Q9CZC8|association_with_transcript=0bp_to_NM_027268,uc009bzw.1_5end|description=CAGE_peak_1_at_Scrn1_5end|id=chr6:54516320..54516407,-|ontology_enrichment_celltype=CL:0000221!3.39e-20!44;CL:0000133!3.39e-20!44;CL:0002319!1.32e-19!43;CL:0000055!7.01e-19!50;CL:0000393!6.20e-16!39;CL:0000211!6.20e-16!39;CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002321!2.00e-07!70;CL:0000220!2.00e-07!70|ontology_enrichment_celltype_v019_2=CL:0000221,1.27e-20,44;CL:0000133,1.27e-20,44;CL:0002319,5.12e-20,43;CL:0000393,2.91e-16,39;CL:0000211,2.91e-16,39;CL:0000540,6.41e-16,33;CL:0000047,6.41e-16,33;CL:0000031,6.41e-16,33;CL:0000404,6.41e-16,33;CL:0000117,1.14e-13,23;CL:0000337,1.14e-13,23;CL:0002321,2.89e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.61e-37!75;UBERON:0001016!1.61e-37!75;UBERON:0004121!2.70e-37!102;UBERON:0000924!2.70e-37!102;UBERON:0006601!2.70e-37!102;UBERON:0001017!1.96e-36!73;UBERON:0005743!1.96e-36!73;UBERON:0002346!6.29e-32!71;UBERON:0003075!6.29e-32!71;UBERON:0007284!6.29e-32!71;UBERON:0000033!8.36e-29!63;UBERON:0001049!1.05e-26!52;UBERON:0005068!1.05e-26!52;UBERON:0006241!1.05e-26!52;UBERON:0007135!1.05e-26!52;UBERON:0000955!9.31e-26!50;UBERON:0006238!9.31e-26!50;UBERON:0002616!3.69e-25!49;UBERON:0003056!3.29e-24!49;UBERON:0003080!7.85e-21!40;UBERON:0002020!1.88e-20!34;UBERON:0002780!2.46e-20!39;UBERON:0001890!2.46e-20!39;UBERON:0006240!2.46e-20!39;UBERON:0002791!9.69e-18!29;UBERON:0003528!9.69e-18!29;UBERON:0001893!9.69e-18!29;UBERON:0007811!5.78e-13!86;UBERON:0000956!6.17e-13!21;UBERON:0001869!6.17e-13!21;UBERON:0000203!6.17e-13!21;UBERON:0000153!3.50e-11!94;UBERON:0002619!1.20e-10!17;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000025!3.29e-07!114;UBERON:0004111!3.49e-07!122;UBERON:0000468!7.66e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.41e-38,75;UBERON:0001017,3.11e-37,73;UBERON:0004121,6.41e-36,95;UBERON:0000924,6.41e-36,95;UBERON:0006601,6.41e-36,95;UBERON:0002346,5.67e-32,64;UBERON:0003075,5.67e-32,64;UBERON:0007284,5.67e-32,64;UBERON:0010314,5.84e-31,92;UBERON:0000073,9.62e-29,54;UBERON:0010371,2.71e-28,73;UBERON:0001049,2.80e-27,52;UBERON:0005068,2.80e-27,52;UBERON:0006241,2.80e-27,52;UBERON:0007135,2.80e-27,52;UBERON:0003056,9.99e-25,49;UBERON:0000955,2.04e-24,47;UBERON:0006238,2.04e-24,47;UBERON:0002616,8.16e-24,46;UBERON:0003080,2.85e-21,40;UBERON:0002020,6.96e-21,34;UBERON:0002780,9.18e-21,39;UBERON:0001890,9.18e-21,39;UBERON:0006240,9.18e-21,39;UBERON:0003528,4.14e-18,29;UBERON:0002791,4.14e-18,29;UBERON:0001893,4.14e-18,29;UBERON:0000956,3.40e-13,21;UBERON:0001869,3.40e-13,21;UBERON:0000203,3.40e-13,21;UBERON:0002619,7.46e-11,17;UBERON:0002021,4.67e-08,10;UBERON:0000411,4.67e-08,10;UBERON:0001950,4.67e-08,10;UBERON:0000025,2.58e-07,114;UBERON:0004111,3.40e-07,122|phase1_expression=37.314681375417,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,18.1142208021779,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,10.7012295279241,8.00877756634165,2.75320128242522,6.25913075478431,86.3379619266568,57.3380936936971,75.6332307398962,39.4761708983522,73.3138078261355,0.167782606057736,0,0,32.6719483765653,54.7278870283025,31.9716697212014,73.6431917528936,98.9213131238701,76.0597684207415,13.2149367506962,10.6715375533337,0,0,0.7104801149461,45.5392167987975,61.0907105461272,70.3015571451479,80.0585214306926,88.9674586516346,66.5566793660862,71.7822758092744,51.3236448710657,47.443508154027,61.5876587028714,62.7660521696516,89.3811366596314,78.3393319606842,82.6927024068315,84.5345826886265,69.2814782840491,80.1255207133963,81.0378158445619,94.2765188782918,79.5497180778903,80.8671146938905,68.22219717206,49.8278352132351,61.8931077274573,0,0,0.679971333707751,0,0,0,4.35377702408431,8.862376774059,5.45550609666024,6.00677276667578,76.6188203585142,8.98285341900225,2.54805239706646,7.11066703153331,0,0,0,3.19714863213368,0,22.5632051378534,8.84775166507293,11.2652226975492,9.22461989024234,14.9215414147096,13.2875239063346,9.80199412371469,0.741584903203122,3.18118585223806,0.884610551949874,5.82360659810673,3.75430581382669,1.93950101254089,0,69.6818296887482,83.5692360185686,0.766371165625774,0.11981512450592,0,0,63.36144046824,120.322658541299,72.5025611691228,85.5215655346,101.774752017472,75.2192721305608,83.2297679537597,5.09196819251581,3.23458123586242,0.758168275301024,11.995185785529,43.9807097213939,51.4980713930979,55.8192602396583,44.6086260793717,58.6474622684446,53.2953076384975,43.1027932974753,46.8253101037618,3.23351989399263,5.48407632486676,5.63043597324636,2.6303487891309,2.22437799380478,3.83077383174383,1.64625709126355,5.7719937377363,0,0,0,7.24940203874257,7.73935997937617,8.10279276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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69938 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CZC8 | |||
|association_with_transcript=0bp_to_NM_027268,uc009bzw.1_5end | |||
|cluster_id=chr6:54516320..54516407,- | |||
|description=CAGE_peak_1_at_Scrn1_5end | |||
|id=chr6:54516320..54516407,- | |||
|ontology_enrichment_celltype=CL:0000221!3.39e-20!44;CL:0000133!3.39e-20!44;CL:0002319!1.32e-19!43;CL:0000055!7.01e-19!50;CL:0000393!6.20e-16!39;CL:0000211!6.20e-16!39;CL:0000540!1.34e-15!33;CL:0000047!1.34e-15!33;CL:0000031!1.34e-15!33;CL:0000404!1.34e-15!33;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002321!2.00e-07!70;CL:0000220!2.00e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.27e-20,44;CL:0000133,1.27e-20,44;CL:0002319,5.12e-20,43;CL:0000393,2.91e-16,39;CL:0000211,2.91e-16,39;CL:0000540,6.41e-16,33;CL:0000047,6.41e-16,33;CL:0000031,6.41e-16,33;CL:0000404,6.41e-16,33;CL:0000117,1.14e-13,23;CL:0000337,1.14e-13,23;CL:0002321,2.89e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.61e-37!75;UBERON:0001016!1.61e-37!75;UBERON:0004121!2.70e-37!102;UBERON:0000924!2.70e-37!102;UBERON:0006601!2.70e-37!102;UBERON:0001017!1.96e-36!73;UBERON:0005743!1.96e-36!73;UBERON:0002346!6.29e-32!71;UBERON:0003075!6.29e-32!71;UBERON:0007284!6.29e-32!71;UBERON:0000033!8.36e-29!63;UBERON:0001049!1.05e-26!52;UBERON:0005068!1.05e-26!52;UBERON:0006241!1.05e-26!52;UBERON:0007135!1.05e-26!52;UBERON:0000955!9.31e-26!50;UBERON:0006238!9.31e-26!50;UBERON:0002616!3.69e-25!49;UBERON:0003056!3.29e-24!49;UBERON:0003080!7.85e-21!40;UBERON:0002020!1.88e-20!34;UBERON:0002780!2.46e-20!39;UBERON:0001890!2.46e-20!39;UBERON:0006240!2.46e-20!39;UBERON:0002791!9.69e-18!29;UBERON:0003528!9.69e-18!29;UBERON:0001893!9.69e-18!29;UBERON:0007811!5.78e-13!86;UBERON:0000956!6.17e-13!21;UBERON:0001869!6.17e-13!21;UBERON:0000203!6.17e-13!21;UBERON:0000153!3.50e-11!94;UBERON:0002619!1.20e-10!17;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000025!3.29e-07!114;UBERON:0004111!3.49e-07!122;UBERON:0000468!7.66e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.41e-38,75;UBERON:0001017,3.11e-37,73;UBERON:0004121,6.41e-36,95;UBERON:0000924,6.41e-36,95;UBERON:0006601,6.41e-36,95;UBERON:0002346,5.67e-32,64;UBERON:0003075,5.67e-32,64;UBERON:0007284,5.67e-32,64;UBERON:0010314,5.84e-31,92;UBERON:0000073,9.62e-29,54;UBERON:0010371,2.71e-28,73;UBERON:0001049,2.80e-27,52;UBERON:0005068,2.80e-27,52;UBERON:0006241,2.80e-27,52;UBERON:0007135,2.80e-27,52;UBERON:0003056,9.99e-25,49;UBERON:0000955,2.04e-24,47;UBERON:0006238,2.04e-24,47;UBERON:0002616,8.16e-24,46;UBERON:0003080,2.85e-21,40;UBERON:0002020,6.96e-21,34;UBERON:0002780,9.18e-21,39;UBERON:0001890,9.18e-21,39;UBERON:0006240,9.18e-21,39;UBERON:0003528,4.14e-18,29;UBERON:0002791,4.14e-18,29;UBERON:0001893,4.14e-18,29;UBERON:0000956,3.40e-13,21;UBERON:0001869,3.40e-13,21;UBERON:0000203,3.40e-13,21;UBERON:0002619,7.46e-11,17;UBERON:0002021,4.67e-08,10;UBERON:0000411,4.67e-08,10;UBERON:0001950,4.67e-08,10;UBERON:0000025,2.58e-07,114;UBERON:0004111,3.40e-07,122 | |||
|phase1_expression=37.314681375417,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,18.1142208021779,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,10.7012295279241,8.00877756634165,2.75320128242522,6.25913075478431,86.3379619266568,57.3380936936971,75.6332307398962,39.4761708983522,73.3138078261355,0.167782606057736,0,0,32.6719483765653,54.7278870283025,31.9716697212014,73.6431917528936,98.9213131238701,76.0597684207415,13.2149367506962,10.6715375533337,0,0,0.7104801149461,45.5392167987975,61.0907105461272,70.3015571451479,80.0585214306926,88.9674586516346,66.5566793660862,71.7822758092744,51.3236448710657,47.443508154027,61.5876587028714,62.7660521696516,89.3811366596314,78.3393319606842,82.6927024068315,84.5345826886265,69.2814782840491,80.1255207133963,81.0378158445619,94.2765188782918,79.5497180778903,80.8671146938905,68.22219717206,49.8278352132351,61.8931077274573,0,0,0.679971333707751,0,0,0,4.35377702408431,8.862376774059,5.45550609666024,6.00677276667578,76.6188203585142,8.98285341900225,2.54805239706646,7.11066703153331,0,0,0,3.19714863213368,0,22.5632051378534,8.84775166507293,11.2652226975492,9.22461989024234,14.9215414147096,13.2875239063346,9.80199412371469,0.741584903203122,3.18118585223806,0.884610551949874,5.82360659810673,3.75430581382669,1.93950101254089,0,69.6818296887482,83.5692360185686,0.766371165625774,0.11981512450592,0,0,63.36144046824,120.322658541299,72.5025611691228,85.5215655346,101.774752017472,75.2192721305608,83.2297679537597,5.09196819251581,3.23458123586242,0.758168275301024,11.995185785529,43.9807097213939,51.4980713930979,55.8192602396583,44.6086260793717,58.6474622684446,53.2953076384975,43.1027932974753,46.8253101037618,3.23351989399263,5.48407632486676,5.63043597324636,2.6303487891309,2.22437799380478,3.83077383174383,1.64625709126355,5.7719937377363,0,0,0,7.24940203874257,7.73935997937617,8.10279276574567,5.44512891845984,3.93528463494808,3.85667782218446,1.16266972375204,3.21928081679543,5.7215017759913,4.11399624783701,5.74586124276833,6.72871119230603,7.30999937126662,5.48875288227627,6.97873377553933,50.4695876553905,64.9328104113285,0,0.528901133327089,10.8777007772969,7.89604684325491,4.76809606891745,3.02525286935014,2.89091456998331,1.90225626112559,2.37264530772256,1.97638745668813,3.2673577144035,5.17286827306992,2.72949721966768,1.79763881730844,2.59365659849633,0.995706366271836,2.46568271239006,3.77020091612105,1.1270773567308,2.03651327845314,2.71533482034676,3.57692681440625,3.03535378196435,1.91893192373483,2.82597710114475,2.59134044235781,0,1.16791574001266,0.982794975566015,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,7.39012760666419,3.60033682363921,0.651859905768103,1.01847051465113,1.40814148973101,1.00503754465089,0.476087281772027,1.56106918286239,3.94087860265477,3.76489972402917,3.98636921643718,5.73521601505083,8.63424909329478,7.37710198765709,0,0,0.491764273019036,0.275936746304732,54.9083017758249,58.1369965497328,0.655739781506702,3.7870639080656,16.0909191902291,18.350620981942,23.2657269551423,16.7278158566786,14.2591151412732,13.8707500086528,22.6693992937941,19.2888866221466,20.5549644532192,73.9039027770156,8.51640511249612,5.34196811001766,7.16702621155735,15.3422214364458,1.32745138339963,3.64170954232472,5.13950046840077,2.64047111658257,3.83892460745005,2.45948118355142,6.97756391554197,6.90714086007261,8.91243445961803,3.79244109522979,1.05418608574999,4.12542172992747,27.9160476718106,22.8677589419764,19.6625199349787,17.1469628025274,10.4630737848941,12.1290795969408,18.2649412868354,20.7036165397928,1.17335854031855,6.35496212591461,3.52845436887939,3.13283880588812,2.58343082713449,3.1362720962641,3.46179797609096,4.26766339337159,1.45740418314925,54.5150387910898,0.170870880797853,2.88941615148511,0.555583582109135,0.753473828018764,0.546776910884101,0,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,9.64824780422463,4.87966721104437,5.40026704109006,4.59994251231831,4.14888871117737,5.79916689454729,7.3561575595549,3.92633912976044,1.42576470620972,0.621339313086926,9.01908701894705,5.23307911153926,7.1147150896552,12.444876054019,14.2075805825504,12.6717094118084,24.7623773542541,20.3118840356562,18.7698226522022,9.90494895386625,6.04863013141517,0,2.43270258348197,1.64337531463724,0.909445760844565,0.895133478337407,0.198681354781265,0.360586348559907,0.147689527174577,0.504832249740738,0.0762068066549998,0,0.194915761479505,0,0.116876902181569,2.0405734525369,0.443971906748129,0.807424709485281,0.671538465456314,9.07991091951295,9.00875882165674,8.97442958909599,4.28736758158132,1.00314420807073,111.256112995562,116.462284836316,117.443580255076,101.737083947463,106.87287308422,71.7624202520215,97.8782625336118,99.9713071157769,86.5502001159831,94.750137050583,18.8892972603202,19.9512436700516,17.9270286041841,12.641549287551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| |||
|short_description=p1@Scrn1 | |||
}} |
Revision as of 23:28, 5 August 2015
Short description: | p1@Scrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scrn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_NM_027268, uc009bzw.1_5end |
EntrezGene: | 69938 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.27e-20 | 44 |
neurectodermal cell | 1.27e-20 | 44 |
neural cell | 5.12e-20 | 43 |
electrically responsive cell | 2.91e-16 | 39 |
electrically active cell | 2.91e-16 | 39 |
neuron | 6.41e-16 | 33 |
neuronal stem cell | 6.41e-16 | 33 |
neuroblast | 6.41e-16 | 33 |
electrically signaling cell | 6.41e-16 | 33 |
CNS neuron (sensu Vertebrata) | 1.14e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-13 | 23 |
embryonic cell | 2.89e-08 | 70 |