FFCP PHASE1:Hg19::chrX:153991175..153991226,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1736 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2890 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000473552_5end | |||
|coexpression_cluster_id=C2971 | |||
|description=CAGE_peak_2_at_DKC1_5end | |||
|id=chrX:153991175..153991226,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.56e-25!679;CL:0000004!1.56e-25!679;CL:0000255!1.56e-25!679;CL:0000012!1.59e-25!682;CL:0000066!3.75e-21!254;CL:0000063!1.62e-16!578;CL:0000003!1.23e-14!722;CL:0002321!2.02e-10!248;CL:0000220!4.84e-10!246;CL:0000076!3.79e-09!62;CL:0000144!9.74e-09!625;CL:0000223!6.80e-08!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-21,253;CL:0002321,3.77e-10,250;CL:0000076,1.33e-08,63;CL:0000223,1.98e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.95e-07;29 | |||
|ontology_enrichment_disease=DOID:162!4.33e-64!235;DOID:14566!6.40e-64!239;DOID:0050686!1.35e-31!137;DOID:0050687!2.04e-31!143;DOID:305!1.01e-27!106;DOID:2531!7.48e-25!51;DOID:0060083!7.48e-25!51;DOID:1240!1.68e-21!39;DOID:8692!2.93e-18!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.07e-18;31!DOID:1240;4.60e-17;39!DOID:2531;1.67e-15;51!DOID:0060083;1.67e-15;51!DOID:305;9.01e-09;106!DOID:0050686;6.19e-08;137!DOID:162;2.89e-07;235!DOID:0050687;3.74e-07;143!DOID:14566;5.11e-07;239 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.32e-64,235;DOID:14566,6.38e-64,239;DOID:0050686,1.35e-31,137;DOID:0050687,2.03e-31,143;DOID:305,1.00e-27,106;DOID:2531,7.47e-25,51;DOID:0060083,7.47e-25,51;DOID:1240,1.68e-21,39;DOID:8692,2.93e-18,31 | |||
|ontology_enrichment_uberon=UBERON:0000072!2.63e-07!46;UBERON:0001737!3.06e-07!9;UBERON:0008947!7.37e-07!38;UBERON:0003258!7.37e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-07;9!UBERON:0001557;2.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.06e-07,9;UBERON:0000072,7.33e-07,47;UBERON:0008947,7.37e-07,38;UBERON:0003258,7.37e-07,38 | |||
|phase1_expression=6.17706489519893,5.99481466894753,4.22863212287913,2.00146596706261,3.5756887554183,4.36169262050184,7.59899634504932,16.4247167090976,5.22371256399677,5.6518805395347,7.6758128476967,4.15038607047327,1.31883489114227,2.10402800032079,1.98838425436749,7.39557661096953,4.82155622419182,10.9546513558106,9.27072317701963,3.57051068422685,3.4680117511523,1.25381888591235,5.43848375549008,8.34933992944594,9.29015533001541,22.5419546956456,31.5266263487792,25.5810039269458,1.18009283054671,2.68680578668049,3.71558695958582,17.4690032650996,18.6747669642515,21.4457325896737,42.1421571156841,43.6459543736384,20.8456311927742,2.76997704265939,2.4065333696417,2.82114131930607,5.15005590751826,4.21061765824673,2.57575567634187,5.81592955118259,7.935394817465,5.57943340731977,3.25400651667958,6.57868620834921,11.7688420940139,5.17846306179871,6.14785695669842,4.02019790810595,4.48169384957604,11.6187243045089,10.8341189275473,6.96496656307637,10.0975275521403,10.7867272533641,6.73384563215986,6.09765151444578,7.03270838378945,5.93732340336089,7.38015533200038,5.11469700639233,6.38460324982885,5.6738522469114,4.35975574296902,4.52247597462138,6.25779502104242,3.47502151528187,9.6863920421339,5.52416453981347,6.64571013625857,8.45021145247767,4.03948169933583,7.96702852931828,5.72876018847125,5.70672192797724,5.78612112109488,2.56511469367124,5.17183360717634,4.74926799788048,1.75996244461323,2.18455444504853,0.889509253863555,3.84057200309856,3.60356388332411,1.72425731986345,1.98313461835459,0.954053754535364,2.27685187643779,2.34894875748376,1.91136614062614,5.28685314316103,0.560508562981536,42.4048376487874,0.983548850569165,0.786021525498329,0.822405995998037,8.69369776031526,0.651844533267181,0.473447805734733,1.94826728407911,5.34770193048833,2.06224135232386,1.99380505125259,0.812411591295047,5.12365278902701,4.94225520727537,3.78207180588455,4.42160028457357,7.53488022911136,1.18629250529648,1.33770414044857,1.04535523804977,8.27158201692233,1.53288197440768,2.06176467289578,1.26509846009751,2.22995790026868,3.25541726928209,1.90090408889675,3.01150238155546,2.30375900077953,1.24930726552346,1.18388626022008,0.821127996921047,2.01606743224732,0.534880391567015,1.01377082717959,9.75227465255847,7.37770945674,9.46182957642124,10.843174571537,4.01070328508712,6.66293987219789,17.4962908351242,5.83961844363163,7.09011128730509,8.42571710357743,8.60780899792635,5.10818394441079,4.37154345951051,8.15725774125745,2.92092654289215,5.57215159357655,7.57860374957531,5.00830311041218,3.43196946468077,4.08603251462521,12.5220316641024,6.02164216574287,12.1499175562658,9.61023501270816,7.55098985177831,19.2582629358047,19.6455268544602,3.87625138753993,6.04802646567407,8.70273593188143,4.43112248820062,12.9246257972147,2.92874469057803,33.457340311474,8.1014194788176,16.1632508194184,7.4094692966636,12.1620398921988,12.2653309972707,14.2389848935219,13.0073238190589,0,0,2.61656431285521,5.96366342034382,14.5625088414267,14.4326007086408,8.89193524321323,13.4773985235376,14.5776176037,7.47242970107935,6.66002380726332,9.64754209739275,14.5487525835263,14.2211855708709,3.78393569112329,4.60940739583999,9.13853584151807,11.8620829195522,14.8322673601557,11.8064457635923,19.494126774865,23.9571957664835,25.421596013107,10.6160169052544,11.0550885580591,4.64966015290945,4.75201142912821,2.96720315134268,7.28129089550421,1.43723628363248,12.9618807744631,10.2597186295011,16.0697186980826,8.77955241761676,7.35570709917647,4.05642759047811,21.665546983564,8.43131287737651,5.76604949810132,8.05341224406335,9.90300617078528,9.99609533612857,6.95629458123199,5.3973888336161,10.6329089311998,8.28214543870188,9.34004964703224,5.98324341174946,6.46584227275248,6.03516307278244,9.77295352808111,12.5474838309761,10.0495643644914,15.5465288736776,17.2082757233402,17.8081610949209,24.9155964444392,20.2177460592962,9.43315600639871,20.6903097718015,29.1981887260664,7.8224766164908,7.71889125831462,6.90674606762403,2.78620756819187,2.16563844500876,62.4659904210376,61.1962424983509,73.7493751443455,57.1322778753801,65.3638332277218,72.8420800671067,56.2246555027886,57.4928892817264,53.4798548155483,6.64339909162183,1.40241773803446,1.6462960453256,2.94017422771084,5.07020139287323,14.7424082501644,8.86184860022106,25.1633966666351,18.2022889043808,14.7548316856732,21.401305654682,19.1082980537953,19.603149620268,14.9067396705233,7.81939932744779,6.23960871167747,11.5465073620219,3.014190529352,7.39674773685676,10.9718500298416,11.1116523018387,10.8444866773721,7.90204397959275,5.15091697256924,5.66299114001014,7.48813648445561,6.8370334652815,17.8094284574876,10.9188383329259,25.0941922119024,43.2567664654757,30.516563543966,14.568541808278,35.9644163664039,6.77972941901841,1.86595303986695,2.73827911492227,1.38866676769018,12.1280978098043,6.11181480893244,3.51652341630141,6.84289784090821,21.285290989588,13.2150945451324,11.7188837378537,6.95212722941236,10.4630416519987,22.2215006037479,10.47100897638,0,15.215449546008,5.31876233169741,8.32059495290929,4.8869401109807,4.25547396069835,3.72991050622539,7.29187767656553,3.25572963234866,4.93944202068461,30.6192013236111,5.68627117988073,18.2148930774689,6.02878754119172,1.74306691720059,5.29856853264902,3.64871341923571,7.03159928004977,12.6500363689819,11.9812427745791,3.44585807502342,1.42636905040718,15.2020372000958,11.0957214177207,9.49023105171447,39.9023112616957,1.18218456121156,1.94064817373566,0.898401253958239,10.6719742173435,6.50699269288109,7.73288812777695,4.85797169469611,5.10351001322531,1.49801404789436,5.9832291840805,0.828831026872071,3.31267027641678,2.00068208423871,3.7977103317963,7.27898015357825,6.42344359669782,6.62350143142526,5.62278791965023,3.91229929646035,2.27407504055985,3.10419213877515,25.904798342882,7.74350507875153,8.68836144680829,0.391602314925481,2.05886054286514,3.3082884179662,3.01999881146064,2.66818894508611,6.97193414326397,6.65741758041988,5.44302527993425,6.20269519546942,4.45039722535381,4.77122160536225,6.15067916427365,5.11707249066703,7.56013429374955,1.48418066444991,22.3604056013851,11.7190738706664,19.9568989113556,12.4621063004069,16.6180841197742,29.8522840491307,6.6167135200084,13.6279863625127,21.011044014123,18.5732991366851,3.93373244878272,2.70719767744447,5.46808893441345,1.56869953835371,0,6.22754610467967,2.27466768141793,6.80374821106063,15.9777777915583,1.54227252690289,2.70946437543853,3.51182841698397,6.37190682612596,4.98645605357235,3.1342465661105,48.8949524920434,44.1825912232082,8.97575437907362,3.60816110269676,12.3643789972435,3.81251743096572,32.7818684049669,43.647525457991,35.0301978177665,24.0522291033513,8.03419649220798,16.3373513913686,22.1830008645088,16.7319005451481,21.6403418800713,7.62683738564743,7.25083469571143,15.4260195623143,13.5328694183041,18.1813406897076,17.8736762649549,18.3762305992201,7.78914912587734,6.04299214086472,8.18512101759664,5.5762981612848,9.85707456563484,10.1138145760234,7.82939692867565,10.0075078316117,11.3068660526173,4.46590043231601,5.37845022021834,5.71890581771475,3.07077349573601,2.99557291623744,7.63687795022248,5.49464048139461,7.55464321849922,4.66712950551293,10.131866601729,14.3549561917054,6.34041284692033,12.2164952309305,6.82687234725426,8.52997213709495,4.22600587027022,6.6884956589913,9.19135307699133,6.78048699721457,9.37321084028411,3.3171948762061,7.0152141640602,2.31510213706675,2.62357900818653,10.3484292250979,8.675057946793,9.85934608862845,13.910901163793,8.74416465016778,6.77674997814376,4.96665489698837,4.01104507065562,2.96365403663912,4.55367808518858,4.54915136318478,24.7290829704566,10.0545341330368,26.1338363667174,3.85989583184795,2.15252686335615,1.68471475667626,1.7737206141467,7.3511488066227,3.04468565539302,2.29391162142713,2.84823593587081,4.76463550915578,2.87953591160336,1.94541993357815,4.32025149790492,3.17250070517708,24.3558882170639,9.62479855263359,20.5833781424067,49.0520382331897,66.5081071821411,49.0167300670573,45.2770614549855,70.2519387443514,24.7041927470753,26.4591978404854,48.0440471606342,39.8731992921111,52.265741498601,82.4136251766102,52.6332401889141,59.5907057861644,82.5422706033016,60.7417118645053,22.5698505975873,30.5719756832631,39.3268178314826,35.5645011548941,39.7100957274342,47.4793071826958,47.8858619099817,33.2335977158823,74.3753115808954,57.9545224316207,32.4270111702054,22.6440053893946,2.78365540616599,10.0729233052096,13.038875960465,40.3473328465107,5.49112314896687,3.26661148915902,2.45728561679386,1.9882952955326,2.53204949538923,2.44879151050393,43.178615047411,10.9785212226557,3.18796781201712,6.3545300572164,18.6430233412164,12.579047947765,16.8626183481665,5.28767299025073,92.2049282771574,28.8224091227731,20.4628948090749,2.46608514092334,0,3.33410970433911,3.87733098438087,2.13366625772258,0,6.2502662660456,31.5730599986267,2.89999830173917,40.0552937964959,27.4593942316188,26.002644994473,17.9266554085562,17.4962768029953,9.20212473146449,5.31444831488303,1.20596438625408,0,1.54810963903714,1.77328571372128,2.19385397153973,19.9357388239752,17.8462392676612,3.23191085715948,16.0658298744272,19.8284957773732,20.2852276366085,14.4501004656271,1.91400695839152,6.04544116452291,5.33034776018635,36.7895873504651,44.7393730725821,55.0160667089518,63.617976294045,64.8966988591718,72.4989255735641,81.973612536848,67.3891094876806,14.3478683879058,20.7305666362118,32.9352656441082,53.6643826560386,1.99052386215701,5.04208117669033,1.22206028986725,36.1755776990359,50.0433952733337,50.5402235606404,2.3590396543237,3.21031058919516,2.10838001152805,54.0066176078371,32.2846621237948,48.5560759068185,3.94584402849391,9.67925728389311,2.75465485467441,2.71702292402498,36.5285909177217,43.4453521954466,9.30515421790059,8.93678280863847,9.41798755221676,10.7525186795663,19.0688395839961,9.29120309188029,8.85154665509168,29.3977192243133,30.8189591294625,1.39781334593624,5.50355303909173,60.7629760495455,52.9897548874845,54.0319707410117,5.91633000579358,17.2099447048425,2.93774963014692,21.6526240941866,25.2367556862797,1.32952671507345,22.0973062490327,7.29445264288957,2.98834192635094,21.9790570540343,20.460839235883,25.9998073296629,13.2128148353713,60.5030151550229,6.83388945609879,12.9631719039237,14.6776542559503,12.6569444037923,13.2597682927218,13.2917271354699,2.40168115483916,3.55953985119182,8.94226116468806,6.87624706271931,13.6701424225244,3.35138881526705,2.7499250881402,10.0502223440754,4.79229601197579,3.004582336956,2.23171457441873,2.28423806454869,1.80149941771202,23.2991899054908,45.1427634620391,46.4825441269779,45.564795645429,29.6266719359394,50.9733459036023,2.38568906942791,2.45166131000836,15.1107959557118,15.5419563354874,16.2021731831382,5.39937339723601,3.0952078182318,1.51873891645062,20.126081255956,3.62506253576312,2.8850023474249,30.7296979271473,29.0445489719209,17.8481133507084,5.71756261098694,1.32418394073086,22.6298998512727,2.17199840701485,6.91377192961014,8.49127136284464,5.98650957812437,81.5999656248429,11.7567735031941,19.2630555584214,7.91382061861645,5.30027555648885,2.97350799631566,2.6446520348538,20.5304205461195,5.63852017853338,1.70859860108311,3.77290332239198,2.48543433208317,3.96932817449561,12.0543095457746,64.5500771418748,45.9605705594531,0.544017803369474,0.5013797880454,2.14441903734423,1.96723578425883,29.2120619025436,3.54427271986794,2.56255156294123,3.004582336956,4.0138643698305,2.99508439149501,1.92498849118289,40.2594527664432,25.9959248561182,17.5912976348311,27.9756026874068,11.9985568046068,23.4167452903441,20.8686281199588,20.2986531926149,11.451952182514,13.8701465375653,5.11388114242741,6.28919754381438,2.66943366478961,8.6959225990831,8.31770080697815,11.346915642543,13.8983840990256,12.1065543044414,8.99606224327209,6.52104418880289,9.12353657249882,2.92425886013794,3.65221543268214,3.45592500693602,5.33127297036314,21.1572781266424,6.36470307208958,6.12240175142184,2.32016879939247,3.98095888698616,12.0008329398946,4.46414416737631,7.40848875285022,2.52369796457302,7.89741304669944,12.8664954824955,40.715109546573,29.4717703165954,14.8174383567254,39.8920828345542,20.953394406534,16.9840795938535,13.5956110738798,33.0408702918798,42.8269164961431,14.1911650148581,26.1366348959706,45.9422354502494,45.8828533827847,2.21213497842769,2.92290463259083,2.92302648689399,2.9441770966052,6.55219697692825,9.09359762388761,46.6999792622566,10.9993067720211,53.8793234955411,17.5659279254032,15.3229307463046,15.6490057714065,13.0087942179083,18.6623178009892,32.3572759398239,13.8015758587753,24.0616891039521,25.7734746133153,37.5108891198396,10.6287460050841,10.2866684334972,15.6420577032508,12.0841653248299,32.3333154505139,20.0142687071367,2.46873160583479,4.8999276376512,1.60573062741149,5.6678630530234,3.19267718114303,1.43581454968528,1.26035848110859,1.1756732918917,1.77623210195036,1.42769420259154,36.9035421563856,20.5267318625068,35.5851481132057,28.3037882068329,2.66967466827017,13.807198521202,25.4612764308832,2.70757182057326,20.3722119390555,7.03362610109783,28.0240163095122,26.3672787191256,17.2991620873943,1.2832141077495,5.46754669029693,1.86018116851066,2.91712726891971,2.18789923607288,2.19303106742873,3.96968942711435,2.98981115411355,18.7810768630205,4.28561468702629,4.70797211106354,1.82089681270989,2.95960848756687,3.63679717666819,19.3593099093709,4.11571222649804,2.92269851800376,1.57854656550838,20.9203098364624,24.8046026219314,1.56986185701028,0.942693539496011,33.6326595976547,1.82631744101899,11.6600899258056,5.7330202546446,1.71543706023975,57.3589410589798,14.6464195963838,32.1637803759772,2.40513409419076,16.991725461369,12.1210118736704,4.14755797088455,3.44181887056222,25.7963761592632,25.8196616420248,2.54032230114557,16.9539082722597,4.96330217062912,12.4220062067066,12.1922420659594,26.3042626088851,85.9521371124999,1.94228651156368,2.66923297826242,2.3196288626764,5.82853191670967,13.5684888808021,19.4971759658141,4.75680363110274,43.3712955029606,19.0197093969592,24.7579063449345,5.55653938377201,5.24542945209498,20.693961039907,1.71603825227734,18.6184472210285,3.53355240806901,2.97046400327086,2.5359343655004,9.17606419314211,9.96229530586448,7.86386233277642,31.0816994926529,19.1052714308054,21.5265871746572,37.7134423439091,2.92134555298607,4.12856355064087,2.15009374727177,38.4962611751371,1.49581278420012,4.36350690340377,5.290268405154,6.69591032700152,5.0839319149456,11.2482906152185,14.0044731566938,42.2857763499502,26.099891208356,38.5517776424691,22.1790446370415,28.3036290567322,19.0537729862205,7.19897633073274,16.6137760696831,4.1458471972939,2.1720929130998,4.90438158372256,2.14257988317366,6.07135752458457,4.59352885789349,16.2591200741889,2.48223917284843,2.42540626749863,10.4504038990541,6.84466602170562,7.5434299376338,7.45910936083834,6.65320713092027,32.5613074443898,30.4172935751489,5.7921684686082,18.4141664318503,4.69281884806909,2.93379466038879,3.66206560484165,0.665756774185513,3.62292828463847,10.5787602460067 | |||
|short_description=p2@DKC1 | |||
}} |
Revision as of 07:36, 23 January 2014
Short description: | p2@DKC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DKC1_5end |
Coexpression cluster: | C2971_Mast_rhabdomyosarcoma_osteosarcoma_hepatoblastoma_malignant_acute_hepatocellular |
Association with transcript: | 0bp_to_ENST00000473552_5end |
EntrezGene: | DKC1 |
HGNC: | 2890 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.62e-21 | 253 |
embryonic cell | 3.77e-10 | 250 |
squamous epithelial cell | 1.33e-08 | 63 |
endodermal cell | 1.98e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.06e-07 | 9 |
segment of respiratory tract | 7.33e-07 | 47 |
respiratory primordium | 7.37e-07 | 38 |
endoderm of foregut | 7.37e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.32e-64 | 235 |
disease of cellular proliferation | 6.38e-64 | 239 |
organ system cancer | 1.35e-31 | 137 |
cell type cancer | 2.03e-31 | 143 |
carcinoma | 1.00e-27 | 106 |
hematologic cancer | 7.47e-25 | 51 |
immune system cancer | 7.47e-25 | 51 |
leukemia | 1.68e-21 | 39 |
myeloid leukemia | 2.93e-18 | 31 |