FFCP PHASE1:Mm9::chr7:147282619..147282630,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1198|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:147282619..147282630,+|id=chr7:147282619..147282630,+|ontology_enrichment_celltype=CL:0002563!2.77e-20!9;CL:0002251!2.77e-20!9;CL:0000239!9.78e-15!6;CL:0000677!9.78e-15!6;CL:0000212!9.78e-15!6;CL:0000584!9.78e-15!6;CL:0000075!1.63e-12!7;CL:0000066!1.64e-11!25;CL:0002076!1.88e-11!15;CL:0000473!3.28e-08!3;CL:0000627!3.28e-08!3;CL:0000682!3.28e-08!3;CL:0000223!3.75e-08!20;CL:0002250!3.84e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,6.31e-17,3;CL:0000239,2.02e-15,6;CL:0000677,2.02e-15,6;CL:0000584,2.02e-15,6;CL:0000075,2.97e-13,7;CL:0002563,2.35e-10,9;CL:0002251,2.35e-10,9;CL:0000066,2.52e-10,25;CL:0000473,1.44e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.18e-34!15;UBERON:0000160!3.81e-31!43;UBERON:0001242!3.22e-29!13;UBERON:0000060!3.22e-29!13;UBERON:0001262!3.22e-29!13;UBERON:0004786!3.22e-29!13;UBERON:0005409!8.54e-23!59;UBERON:0004923!1.97e-22!24;UBERON:0003350!2.77e-20!9;UBERON:0004808!2.77e-20!9;UBERON:0001277!2.77e-20!9;UBERON:0000485!2.87e-16!11;UBERON:0004119!1.55e-09!130;UBERON:0000925!1.55e-09!130;UBERON:0006595!1.55e-09!130;UBERON:0001007!6.20e-09!128;UBERON:0001555!6.20e-09!128;UBERON:0007026!6.20e-09!128;UBERON:0000331!5.63e-08!3;UBERON:0002116!5.63e-08!3;UBERON:0001204!5.63e-08!3;UBERON:0001168!5.63e-08!3;UBERON:0004921!2.45e-07!126;UBERON:0004185!2.45e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.62e-29,15;UBERON:0001242,8.56e-21,13;UBERON:0001262,8.56e-21,13;UBERON:0004786,8.56e-21,13;UBERON:0004923,4.46e-18,24;UBERON:0000160,1.30e-16,31;UBERON:0001962,2.97e-12,2;UBERON:0001961,2.97e-12,2;UBERON:0001744,2.97e-12,2;UBERON:0005409,1.58e-10,47;UBERON:0003350,2.35e-10,9;UBERON:0004808,2.35e-10,9;UBERON:0001277,2.35e-10,9;UBERON:0000485,1.67e-08,11;UBERON:0002465,1.84e-08,3;UBERON:0000331,2.37e-08,3;UBERON:0002116,2.37e-08,3;UBERON:0001204,2.37e-08,3;UBERON:0001168,2.37e-08,3;UBERON:0006834,2.75e-07,1;UBERON:0003199,6.93e-07,1|phase1_expression=0,3.83872948403297,2.27499619694768,7.86406949397758,6.01074875935617,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.15980299262857,3.44113921600755,1.72269589234506,3.01533397311352,2.80112602491656,4.94060890586572,2.01624103807945,0.665191531965914,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,0.793351699990633,0,0,0,0.80673409849337,0.22237804384487,0.190225626112559,0,0.988193728344065,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,1.08069024937347,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5102186252662,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:147282619..147282630,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1198 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:147282619..147282630,+ | |||
|description=CAGE_peak_at_chr7:147282619..147282630,+ | |||
|id=chr7:147282619..147282630,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.77e-20!9;CL:0002251!2.77e-20!9;CL:0000239!9.78e-15!6;CL:0000677!9.78e-15!6;CL:0000212!9.78e-15!6;CL:0000584!9.78e-15!6;CL:0000075!1.63e-12!7;CL:0000066!1.64e-11!25;CL:0002076!1.88e-11!15;CL:0000473!3.28e-08!3;CL:0000627!3.28e-08!3;CL:0000682!3.28e-08!3;CL:0000223!3.75e-08!20;CL:0002250!3.84e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.31e-17,3;CL:0000239,2.02e-15,6;CL:0000677,2.02e-15,6;CL:0000584,2.02e-15,6;CL:0000075,2.97e-13,7;CL:0002563,2.35e-10,9;CL:0002251,2.35e-10,9;CL:0000066,2.52e-10,25;CL:0000473,1.44e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.18e-34!15;UBERON:0000160!3.81e-31!43;UBERON:0001242!3.22e-29!13;UBERON:0000060!3.22e-29!13;UBERON:0001262!3.22e-29!13;UBERON:0004786!3.22e-29!13;UBERON:0005409!8.54e-23!59;UBERON:0004923!1.97e-22!24;UBERON:0003350!2.77e-20!9;UBERON:0004808!2.77e-20!9;UBERON:0001277!2.77e-20!9;UBERON:0000485!2.87e-16!11;UBERON:0004119!1.55e-09!130;UBERON:0000925!1.55e-09!130;UBERON:0006595!1.55e-09!130;UBERON:0001007!6.20e-09!128;UBERON:0001555!6.20e-09!128;UBERON:0007026!6.20e-09!128;UBERON:0000331!5.63e-08!3;UBERON:0002116!5.63e-08!3;UBERON:0001204!5.63e-08!3;UBERON:0001168!5.63e-08!3;UBERON:0004921!2.45e-07!126;UBERON:0004185!2.45e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.62e-29,15;UBERON:0001242,8.56e-21,13;UBERON:0001262,8.56e-21,13;UBERON:0004786,8.56e-21,13;UBERON:0004923,4.46e-18,24;UBERON:0000160,1.30e-16,31;UBERON:0001962,2.97e-12,2;UBERON:0001961,2.97e-12,2;UBERON:0001744,2.97e-12,2;UBERON:0005409,1.58e-10,47;UBERON:0003350,2.35e-10,9;UBERON:0004808,2.35e-10,9;UBERON:0001277,2.35e-10,9;UBERON:0000485,1.67e-08,11;UBERON:0002465,1.84e-08,3;UBERON:0000331,2.37e-08,3;UBERON:0002116,2.37e-08,3;UBERON:0001204,2.37e-08,3;UBERON:0001168,2.37e-08,3;UBERON:0006834,2.75e-07,1;UBERON:0003199,6.93e-07,1 | |||
|phase1_expression=0,3.83872948403297,2.27499619694768,7.86406949397758,6.01074875935617,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.15980299262857,3.44113921600755,1.72269589234506,3.01533397311352,2.80112602491656,4.94060890586572,2.01624103807945,0.665191531965914,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.91256348951394,0.793351699990633,0,0,0,0.80673409849337,0.22237804384487,0.190225626112559,0,0.988193728344065,0.502670417600539,0.596869416123452,0.38992817423824,0.898819408654221,1.08069024937347,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5102186252662,0.73260649706906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:147282619..147282630,+ | |||
}} |
Latest revision as of 11:29, 4 August 2015
Short description: | p@chr7:147282619..147282630, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:147282619..147282630, + |
Coexpression cluster: | MCL_coexpression_mm9:1198 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.31e-17 | 3 |
brush border epithelial cell | 2.02e-15 | 6 |
gut absorptive cell | 2.02e-15 | 6 |
enterocyte | 2.02e-15 | 6 |
columnar/cuboidal epithelial cell | 2.97e-13 | 7 |
intestinal epithelial cell | 2.35e-10 | 9 |
epithelial cell of alimentary canal | 2.35e-10 | 9 |
epithelial cell | 2.52e-10 | 25 |
defensive cell | 1.44e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.62e-29 | 15 |
intestinal mucosa | 8.56e-21 | 13 |
wall of intestine | 8.56e-21 | 13 |
gastrointestinal system mucosa | 8.56e-21 | 13 |
organ component layer | 4.46e-18 | 24 |
intestine | 1.30e-16 | 31 |
gut-associated lymphoid tissue | 2.97e-12 | 2 |
mucosa-associated lymphoid tissue | 2.97e-12 | 2 |
lymphoid tissue | 2.97e-12 | 2 |
gastrointestinal system | 1.58e-10 | 47 |
epithelium of mucosa | 2.35e-10 | 9 |
gastrointestinal system epithelium | 2.35e-10 | 9 |
intestinal epithelium | 2.35e-10 | 9 |
simple columnar epithelium | 1.67e-08 | 11 |
lymphoid system | 1.84e-08 | 3 |
ileal mucosa | 2.37e-08 | 3 |
ileum | 2.37e-08 | 3 |
mucosa of small intestine | 2.37e-08 | 3 |
wall of small intestine | 2.37e-08 | 3 |
uterus or analog | 2.75e-07 | 1 |
egg chamber | 6.93e-07 | 1 |