FFCP PHASE1:Mm9::chr7:28043780..28043834,+: Difference between revisions
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{{FFCP|EntrezGene=18223|HGNC=|MCL_coexpression_id=1683|UniProt=O08919,Q3UH86|association_with_transcript=0bp_to_ENSMUST00000132897,ENSMUST00000149805,NM_010950,uc009fvq.1_5end|description=CAGE_peak_1_at_Numbl_5end|id=chr7:28043780..28043834,+|ontology_enrichment_celltype=CL:0000055!3.19e-18!50;CL:0000221!2.16e-17!44;CL:0000133!2.16e-17!44;CL:0002319!2.21e-17!43;CL:0000393!4.66e-13!39;CL:0000211!4.66e-13!39;CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70;CL:0000333!3.86e-07!10;CL:0000095!3.86e-07!10;CL:0000243!3.86e-07!10;CL:0000123!3.86e-07!10;CL:0000125!3.86e-07!10;CL:0000030!3.86e-07!10;CL:0000339!3.86e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-17,44;CL:0000133,2.04e-17,44;CL:0002319,2.09e-17,43;CL:0000393,4.48e-13,39;CL:0000211,4.48e-13,39;CL:0000117,3.57e-12,23;CL:0000337,3.57e-12,23;CL:0000540,1.45e-11,33;CL:0000047,1.45e-11,33;CL:0000031,1.45e-11,33;CL:0000404,1.45e-11,33;CL:0002321,2.30e-07,70;CL:0000333,3.78e-07,10;CL:0000095,3.78e-07,10;CL:0000243,3.78e-07,10;CL:0000123,3.78e-07,10;CL:0000125,3.78e-07,10;CL:0000030,3.78e-07,10;CL:0000339,3.78e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.32e-32!75;UBERON:0001016!5.32e-32!75;UBERON:0001017!8.64e-31!73;UBERON:0005743!8.64e-31!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0001049!3.34e-24!52;UBERON:0005068!3.34e-24!52;UBERON:0006241!3.34e-24!52;UBERON:0007135!3.34e-24!52;UBERON:0000955!8.98e-24!50;UBERON:0006238!8.98e-24!50;UBERON:0002616!2.68e-23!49;UBERON:0000033!2.95e-21!63;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003080!4.14e-20!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002020!1.38e-19!34;UBERON:0003056!9.19e-19!49;UBERON:0002791!3.78e-17!29;UBERON:0003528!3.78e-17!29;UBERON:0001893!3.78e-17!29;UBERON:0000956!1.08e-13!21;UBERON:0001869!1.08e-13!21;UBERON:0000203!1.08e-13!21;UBERON:0002619!1.92e-11!17;UBERON:0000153!8.90e-10!94;UBERON:0007811!6.47e-09!86;UBERON:0000025!5.32e-08!114;UBERON:0002021!7.72e-08!10;UBERON:0000411!7.72e-08!10;UBERON:0001950!7.72e-08!10;UBERON:0004111!1.96e-07!122;UBERON:0000468!8.59e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.79e-32,75;UBERON:0001017,7.81e-31,73;UBERON:0004121,2.17e-29,95;UBERON:0000924,2.17e-29,95;UBERON:0006601,2.17e-29,95;UBERON:0000073,5.16e-26,54;UBERON:0001049,3.09e-24,52;UBERON:0005068,3.09e-24,52;UBERON:0006241,3.09e-24,52;UBERON:0007135,3.09e-24,52;UBERON:0002346,1.12e-22,64;UBERON:0003075,1.12e-22,64;UBERON:0007284,1.12e-22,64;UBERON:0000955,2.83e-22,47;UBERON:0006238,2.83e-22,47;UBERON:0002616,8.32e-22,46;UBERON:0010371,1.09e-21,73;UBERON:0003080,3.88e-20,40;UBERON:0002780,9.45e-20,39;UBERON:0001890,9.45e-20,39;UBERON:0006240,9.45e-20,39;UBERON:0002020,1.30e-19,34;UBERON:0003056,8.66e-19,49;UBERON:0003528,3.58e-17,29;UBERON:0002791,3.58e-17,29;UBERON:0001893,3.58e-17,29;UBERON:0010314,5.57e-16,92;UBERON:0000956,1.04e-13,21;UBERON:0001869,1.04e-13,21;UBERON:0000203,1.04e-13,21;UBERON:0002619,1.86e-11,17;UBERON:0000025,4.45e-08,114;UBERON:0002021,7.55e-08,10;UBERON:0000411,7.55e-08,10;UBERON:0001950,7.55e-08,10;UBERON:0004111,1.66e-07,122|phase1_expression=16.4953312517938,0.697950815278722,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0.171200729931206,0,0,0.809901069559304,0.699561878128147,0.946386496074713,0.411343300817216,1.27316895539409,11.4808441703944,1.39007331681239,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,8.25539875497521,3.07532393792285,0,0,0.166234645358492,0.204169356262369,0,0,0.523523743973798,1.17646297606203,3.41522742479223,1.45653105909346,17.1219672446785,18.4506014819517,19.8230492334616,95.4517440104608,57.3406161280574,70.5192646577655,54.2459418417251,54.7346908555167,119.314628422926,0.671130424230945,0,1.00828139742739,27.7840190918823,29.7994777536307,26.814948798427,42.6887732413751,49.1961610722991,66.5522973681488,59.6366376441673,68.4756993005577,7.64914759689189,2.96659908770092,4.9733608046227,42.2436155830951,47.2588515545512,41.5795345356995,48.0621140460819,52.5812403378455,34.849420097264,33.130281142742,34.9098777762619,29.0411777185256,72.6182841421917,52.8556228797066,28.7296510691672,33.0254046500923,47.6109498706,41.4439025518916,45.3194632384381,24.2889209131201,26.449842671489,31.1708425464693,39.4802304534715,38.1556104541596,40.0758808524396,38.0145490532584,39.7506406161692,10.1452571045587,3.44169550792555,0,0.539703191637817,0,0,3.37066608316204,16.8726019352277,11.1707981979234,12.0135455333516,16.6195235336483,16.6824420638613,10.1922095882658,21.3320010945999,7.79367747640371,9.62767488805375,3.53867111510348,2.16949371466214,0,10.0940654564081,14.399282121589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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18223 | |||
|HGNC= | |||
|MCL_coexpression_id=1683 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08919,uniprot:Q3UH86 | |||
|association_with_transcript=0bp_to_ENSMUST00000132897,ENSMUST00000149805,NM_010950,uc009fvq.1_5end | |||
|cluster_id=chr7:28043780..28043834,+ | |||
|description=CAGE_peak_1_at_Numbl_5end | |||
|id=chr7:28043780..28043834,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.19e-18!50;CL:0000221!2.16e-17!44;CL:0000133!2.16e-17!44;CL:0002319!2.21e-17!43;CL:0000393!4.66e-13!39;CL:0000211!4.66e-13!39;CL:0000117!3.70e-12!23;CL:0000337!3.70e-12!23;CL:0000540!1.50e-11!33;CL:0000047!1.50e-11!33;CL:0000031!1.50e-11!33;CL:0000404!1.50e-11!33;CL:0002321!2.42e-07!70;CL:0000220!2.42e-07!70;CL:0000333!3.86e-07!10;CL:0000095!3.86e-07!10;CL:0000243!3.86e-07!10;CL:0000123!3.86e-07!10;CL:0000125!3.86e-07!10;CL:0000030!3.86e-07!10;CL:0000339!3.86e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.04e-17,44;CL:0000133,2.04e-17,44;CL:0002319,2.09e-17,43;CL:0000393,4.48e-13,39;CL:0000211,4.48e-13,39;CL:0000117,3.57e-12,23;CL:0000337,3.57e-12,23;CL:0000540,1.45e-11,33;CL:0000047,1.45e-11,33;CL:0000031,1.45e-11,33;CL:0000404,1.45e-11,33;CL:0002321,2.30e-07,70;CL:0000333,3.78e-07,10;CL:0000095,3.78e-07,10;CL:0000243,3.78e-07,10;CL:0000123,3.78e-07,10;CL:0000125,3.78e-07,10;CL:0000030,3.78e-07,10;CL:0000339,3.78e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.32e-32!75;UBERON:0001016!5.32e-32!75;UBERON:0001017!8.64e-31!73;UBERON:0005743!8.64e-31!73;UBERON:0004121!1.47e-27!102;UBERON:0000924!1.47e-27!102;UBERON:0006601!1.47e-27!102;UBERON:0001049!3.34e-24!52;UBERON:0005068!3.34e-24!52;UBERON:0006241!3.34e-24!52;UBERON:0007135!3.34e-24!52;UBERON:0000955!8.98e-24!50;UBERON:0006238!8.98e-24!50;UBERON:0002616!2.68e-23!49;UBERON:0000033!2.95e-21!63;UBERON:0002346!1.71e-20!71;UBERON:0003075!1.71e-20!71;UBERON:0007284!1.71e-20!71;UBERON:0003080!4.14e-20!40;UBERON:0002780!1.01e-19!39;UBERON:0001890!1.01e-19!39;UBERON:0006240!1.01e-19!39;UBERON:0002020!1.38e-19!34;UBERON:0003056!9.19e-19!49;UBERON:0002791!3.78e-17!29;UBERON:0003528!3.78e-17!29;UBERON:0001893!3.78e-17!29;UBERON:0000956!1.08e-13!21;UBERON:0001869!1.08e-13!21;UBERON:0000203!1.08e-13!21;UBERON:0002619!1.92e-11!17;UBERON:0000153!8.90e-10!94;UBERON:0007811!6.47e-09!86;UBERON:0000025!5.32e-08!114;UBERON:0002021!7.72e-08!10;UBERON:0000411!7.72e-08!10;UBERON:0001950!7.72e-08!10;UBERON:0004111!1.96e-07!122;UBERON:0000468!8.59e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.79e-32,75;UBERON:0001017,7.81e-31,73;UBERON:0004121,2.17e-29,95;UBERON:0000924,2.17e-29,95;UBERON:0006601,2.17e-29,95;UBERON:0000073,5.16e-26,54;UBERON:0001049,3.09e-24,52;UBERON:0005068,3.09e-24,52;UBERON:0006241,3.09e-24,52;UBERON:0007135,3.09e-24,52;UBERON:0002346,1.12e-22,64;UBERON:0003075,1.12e-22,64;UBERON:0007284,1.12e-22,64;UBERON:0000955,2.83e-22,47;UBERON:0006238,2.83e-22,47;UBERON:0002616,8.32e-22,46;UBERON:0010371,1.09e-21,73;UBERON:0003080,3.88e-20,40;UBERON:0002780,9.45e-20,39;UBERON:0001890,9.45e-20,39;UBERON:0006240,9.45e-20,39;UBERON:0002020,1.30e-19,34;UBERON:0003056,8.66e-19,49;UBERON:0003528,3.58e-17,29;UBERON:0002791,3.58e-17,29;UBERON:0001893,3.58e-17,29;UBERON:0010314,5.57e-16,92;UBERON:0000956,1.04e-13,21;UBERON:0001869,1.04e-13,21;UBERON:0000203,1.04e-13,21;UBERON:0002619,1.86e-11,17;UBERON:0000025,4.45e-08,114;UBERON:0002021,7.55e-08,10;UBERON:0000411,7.55e-08,10;UBERON:0001950,7.55e-08,10;UBERON:0004111,1.66e-07,122 | |||
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| |||
|short_description=p1@Numbl | |||
}} |
Revision as of 21:30, 4 August 2015
Short description: | p1@Numbl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Numbl_5end |
Coexpression cluster: | MCL_coexpression_mm9:1683 |
Association with transcript: | 0bp_to_ENSMUST00000132897, ENSMUST00000149805, NM_010950, uc009fvq.1_5end |
EntrezGene: | 18223 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.04e-17 | 44 |
neurectodermal cell | 2.04e-17 | 44 |
neural cell | 2.09e-17 | 43 |
electrically responsive cell | 4.48e-13 | 39 |
electrically active cell | 4.48e-13 | 39 |
CNS neuron (sensu Vertebrata) | 3.57e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-12 | 23 |
neuron | 1.45e-11 | 33 |
neuronal stem cell | 1.45e-11 | 33 |
neuroblast | 1.45e-11 | 33 |
electrically signaling cell | 1.45e-11 | 33 |
embryonic cell | 2.30e-07 | 70 |
migratory neural crest cell | 3.78e-07 | 10 |
neuron associated cell | 3.78e-07 | 10 |
glial cell (sensu Vertebrata) | 3.78e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.78e-07 | 10 |
glial cell | 3.78e-07 | 10 |
glioblast | 3.78e-07 | 10 |
glioblast (sensu Vertebrata) | 3.78e-07 | 10 |