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FFCP PHASE1:Mm9::chr8:9976340..9976355,-: Difference between revisions

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{{FFCP|EntrezGene=319583|HGNC=|UniProt=G3UWC4,Q8BTF7|association_with_transcript=-17bp_to_ENSMUST00000095476,NM_176953,uc009kul.1_5end|description=CAGE_peak_5_at_Lig4_5end|id=chr8:9976340..9976355,-|ontology_enrichment_celltype=CL:0000117!3.19e-09!23;CL:0000337!3.19e-09!23;CL:0000540!8.64e-09!33;CL:0000047!8.64e-09!33;CL:0000031!8.64e-09!33;CL:0000404!8.64e-09!33;CL:0000393!2.77e-07!39;CL:0000211!2.77e-07!39|ontology_enrichment_celltype_v019_2=CL:0002609,2.45e-08,6;CL:0002608,8.07e-08,3;CL:0000117,8.97e-08,23;CL:0000337,8.97e-08,23;CL:0002612,1.10e-07,3;CL:0000540,4.36e-07,33;CL:0000047,4.36e-07,33;CL:0000031,4.36e-07,33;CL:0000404,4.36e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.58e-15!75;UBERON:0001016!1.58e-15!75;UBERON:0001017!2.99e-15!73;UBERON:0005743!2.99e-15!73;UBERON:0001049!1.18e-14!52;UBERON:0005068!1.18e-14!52;UBERON:0006241!1.18e-14!52;UBERON:0007135!1.18e-14!52;UBERON:0000033!4.55e-14!63;UBERON:0002346!1.47e-13!71;UBERON:0003075!1.47e-13!71;UBERON:0007284!1.47e-13!71;UBERON:0004121!6.68e-13!102;UBERON:0000924!6.68e-13!102;UBERON:0006601!6.68e-13!102;UBERON:0000955!1.45e-12!50;UBERON:0006238!1.45e-12!50;UBERON:0002616!3.88e-12!49;UBERON:0003056!6.10e-11!49;UBERON:0003080!3.43e-10!40;UBERON:0002020!7.86e-10!34;UBERON:0007811!1.25e-09!86;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0000153!2.22e-09!94;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.00e-15,52;UBERON:0005068,3.00e-15,52;UBERON:0006241,3.00e-15,52;UBERON:0007135,3.00e-15,52;UBERON:0000073,1.29e-14,54;UBERON:0002020,2.62e-14,34;UBERON:0001017,2.94e-14,73;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0001016,7.99e-14,75;UBERON:0002616,2.27e-12,46;UBERON:0010371,3.59e-12,73;UBERON:0000955,4.49e-12,47;UBERON:0006238,4.49e-12,47;UBERON:0003080,7.38e-12,40;UBERON:0000956,7.60e-12,21;UBERON:0001869,7.60e-12,21;UBERON:0000203,7.60e-12,21;UBERON:0002619,5.10e-11,17;UBERON:0003528,5.73e-11,29;UBERON:0002791,5.73e-11,29;UBERON:0001893,5.73e-11,29;UBERON:0004121,1.79e-10,95;UBERON:0000924,1.79e-10,95;UBERON:0006601,1.79e-10,95;UBERON:0002780,6.48e-10,39;UBERON:0001890,6.48e-10,39;UBERON:0006240,6.48e-10,39;UBERON:0003056,1.98e-09,49;UBERON:0010314,3.06e-09,92;UBERON:0002257,1.10e-07,3;UBERON:0001954,2.08e-07,7;UBERON:0003022,2.08e-07,7;UBERON:0002421,2.08e-07,7;UBERON:0000349,2.08e-07,7;UBERON:0002600,2.08e-07,7;UBERON:0000025,5.03e-07,114|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.503637815735669,0,0.129123323441576,0,0,0,0.319088635981346,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.510259740906419,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0.515672092277442,0.809265843438391,0.528990979272033,1.90149421051854,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.810035629990144,1.26194976810829,0.571301968807607,0.883474163806454,1.5923803897944,1.0543001812006,0.919218786610021,0,0.766124028511126,0.921639199537461,0.395658863190582,0.640413505216868,0,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,1.13897344639282,0.931997229126503,0.302904773332736,0.377857800533928,0,0,0,1.07940638327563,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0.251333182659351,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,1.46390398505774,0.41889341362691,0.255457055208591,0,0,0,1.04853447583376,0.915001205637253,1.88481528169297,0.347648640384553,0.255715457330331,1.0389402227978,0.648965052271031,0,0,0.252722758433675,0,0.260240885925407,0.459804208866946,0.180062129805349,0.60281927134286,0.340182495756639,0.896796041993948,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.703804496655795,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.393528463494808,0,0.930135779001631,0.268273401399619,0.583826711835847,0.493679549740441,0,0.405344047729279,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,2.57261530948211,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:319583
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:G3UWC4,uniprot:Q8BTF7
|association_with_transcript=-17bp_to_ENSMUST00000095476,NM_176953,uc009kul.1_5end
|cluster_id=chr8:9976340..9976355,-
|description=CAGE_peak_5_at_Lig4_5end
|id=chr8:9976340..9976355,-
|ontology_enrichment_celltype=CL:0000117!3.19e-09!23;CL:0000337!3.19e-09!23;CL:0000540!8.64e-09!33;CL:0000047!8.64e-09!33;CL:0000031!8.64e-09!33;CL:0000404!8.64e-09!33;CL:0000393!2.77e-07!39;CL:0000211!2.77e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002609,2.45e-08,6;CL:0002608,8.07e-08,3;CL:0000117,8.97e-08,23;CL:0000337,8.97e-08,23;CL:0002612,1.10e-07,3;CL:0000540,4.36e-07,33;CL:0000047,4.36e-07,33;CL:0000031,4.36e-07,33;CL:0000404,4.36e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.58e-15!75;UBERON:0001016!1.58e-15!75;UBERON:0001017!2.99e-15!73;UBERON:0005743!2.99e-15!73;UBERON:0001049!1.18e-14!52;UBERON:0005068!1.18e-14!52;UBERON:0006241!1.18e-14!52;UBERON:0007135!1.18e-14!52;UBERON:0000033!4.55e-14!63;UBERON:0002346!1.47e-13!71;UBERON:0003075!1.47e-13!71;UBERON:0007284!1.47e-13!71;UBERON:0004121!6.68e-13!102;UBERON:0000924!6.68e-13!102;UBERON:0006601!6.68e-13!102;UBERON:0000955!1.45e-12!50;UBERON:0006238!1.45e-12!50;UBERON:0002616!3.88e-12!49;UBERON:0003056!6.10e-11!49;UBERON:0003080!3.43e-10!40;UBERON:0002020!7.86e-10!34;UBERON:0007811!1.25e-09!86;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0000153!2.22e-09!94;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.00e-15,52;UBERON:0005068,3.00e-15,52;UBERON:0006241,3.00e-15,52;UBERON:0007135,3.00e-15,52;UBERON:0000073,1.29e-14,54;UBERON:0002020,2.62e-14,34;UBERON:0001017,2.94e-14,73;UBERON:0002346,3.70e-14,64;UBERON:0003075,3.70e-14,64;UBERON:0007284,3.70e-14,64;UBERON:0001016,7.99e-14,75;UBERON:0002616,2.27e-12,46;UBERON:0010371,3.59e-12,73;UBERON:0000955,4.49e-12,47;UBERON:0006238,4.49e-12,47;UBERON:0003080,7.38e-12,40;UBERON:0000956,7.60e-12,21;UBERON:0001869,7.60e-12,21;UBERON:0000203,7.60e-12,21;UBERON:0002619,5.10e-11,17;UBERON:0003528,5.73e-11,29;UBERON:0002791,5.73e-11,29;UBERON:0001893,5.73e-11,29;UBERON:0004121,1.79e-10,95;UBERON:0000924,1.79e-10,95;UBERON:0006601,1.79e-10,95;UBERON:0002780,6.48e-10,39;UBERON:0001890,6.48e-10,39;UBERON:0006240,6.48e-10,39;UBERON:0003056,1.98e-09,49;UBERON:0010314,3.06e-09,92;UBERON:0002257,1.10e-07,3;UBERON:0001954,2.08e-07,7;UBERON:0003022,2.08e-07,7;UBERON:0002421,2.08e-07,7;UBERON:0000349,2.08e-07,7;UBERON:0002600,2.08e-07,7;UBERON:0000025,5.03e-07,114
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0.503637815735669,0,0.129123323441576,0,0,0,0.319088635981346,0,0,0,0,0,0.157731082679119,0.274228867211478,0,0.510259740906419,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0,0.782391344348039,0,0,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0.515672092277442,0.809265843438391,0.528990979272033,1.90149421051854,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0.810035629990144,1.26194976810829,0.571301968807607,0.883474163806454,1.5923803897944,1.0543001812006,0.919218786610021,0,0.766124028511126,0.921639199537461,0.395658863190582,0.640413505216868,0,0.279182999001381,0.56276261003168,0.45839474333043,1.17851434189467,1.13897344639282,0.931997229126503,0.302904773332736,0.377857800533928,0,0,0,1.07940638327563,0,0,0,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0,0.251333182659351,0,0.144599356919912,0.884610551949874,0,0.220841518460394,0,0,1.46390398505774,0.41889341362691,0.255457055208591,0,0,0,1.04853447583376,0.915001205637253,1.88481528169297,0.347648640384553,0.255715457330331,1.0389402227978,0.648965052271031,0,0,0.252722758433675,0,0.260240885925407,0.459804208866946,0.180062129805349,0.60281927134286,0.340182495756639,0.896796041993948,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.703804496655795,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0.393528463494808,0,0.930135779001631,0.268273401399619,0.583826711835847,0.493679549740441,0,0.405344047729279,0.146199987425332,0.219550115291051,0.268412837520744,0.841159794256509,2.57261530948211,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.779856348476481,0,0.432276099749388,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0.387904974335251,0,0.252946148497029,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0.505157755894224,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.472905432318573,0,0.478364305972461,0.327726629431476,0.518054945597687,0.144649058581512,0,0,0,0,0.963303539926752,0.586058432961016,0.163934945376675,0,1.26203287766503,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,0.642642632843614,0.567760340833074,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,0,0,0.680879211507576,0.36012218806262,0.517434735131018,0.643011105094777,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0.119372344003136,0,0,0.370850604021019,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.324016022465404,0.209088296014469,0,0,0,0,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0,0.194451188344048,0.258319646955462,0.337912250981556,0.117357238645754,0.2604087696879,0,0.724752362478018,0.576060012515731,0,0.405450430580328,0,0.25984164595559,0,0.198681354781265,0.600977247599844,0.147689527174577,0.302899349844443,0.0762068066549998,0.504130925684203,0.38983152295901,0.288635524920988,0.467507608726276,0.226730383615211,0.443971906748129,0.269141569828427,0.335769232728157,0.579568782096571,0.187682475451182,0.36630324853453,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,1.5107877947794,0,1.80128481289688,1.81256963593682,0,0.726511433089237,0,1.19513524027894,0.486213434136588,0.209613162627982,0.551530525350042,0,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.754505365544305,0.37456602987953,0.320125762024346,0.34461281373368,0,0.695305955669133,0,0,0.441596760403192,0,0.887379030796687,0.476872379894642,0.145346416632329,0.658765662907314,0.592302255241736,0.548783918618318,0.789209134313529,0.407412341537585,0,0.711810108745045,0.197008964751127,0.818462086339379,0,0,0.999242311751784,0.701794825336225,0,0,0,0
|short_description=p5@Lig4
}}

Revision as of 10:13, 4 August 2015

Short description:p5@Lig4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lig4_5end
Coexpression cluster:NA
Association with transcript: -17bp_to_ENSMUST00000095476, NM_176953, uc009kul.1_5end
EntrezGene:319583
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p5@Lig4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.88
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neural tube3.00e-1552
neural rod3.00e-1552
future spinal cord3.00e-1552
neural keel3.00e-1552
regional part of nervous system1.29e-1454
gray matter2.62e-1434
central nervous system2.94e-1473
neurectoderm3.70e-1464
neural plate3.70e-1464
presumptive neural plate3.70e-1464
nervous system7.99e-1475
regional part of brain2.27e-1246
ecto-epithelium3.59e-1273
brain4.49e-1247
future brain4.49e-1247
anterior neural tube7.38e-1240
cerebral cortex7.60e-1221
cerebral hemisphere7.60e-1221
pallium7.60e-1221
regional part of cerebral cortex5.10e-1117
brain grey matter5.73e-1129
regional part of telencephalon5.73e-1129
telencephalon5.73e-1129
ectoderm-derived structure1.79e-1095
ectoderm1.79e-1095
presumptive ectoderm1.79e-1095
regional part of forebrain6.48e-1039
forebrain6.48e-1039
future forebrain6.48e-1039
pre-chordal neural plate1.98e-0949
structure with developmental contribution from neural crest3.06e-0992
ventral horn of spinal cord1.10e-073
Ammon's horn2.08e-077
lobe parts of cerebral cortex2.08e-077
hippocampal formation2.08e-077
limbic system2.08e-077
limbic lobe2.08e-077
tube5.03e-07114
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