FFCP PHASE1:Hg19::chr19:4559720..4559799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10501 | |EntrezGene=entrezgene:10501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=10739 | |HGNC=HGNC:10739 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9H3T3 | |UniProt=uniprot:Q9H3T3 | ||
|association_with_transcript=0bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | |association_with_transcript=0bp_to_NM_032108,uc010dud.2,uc010xih.1_5end | ||
|cluster_id=chr19:4559720..4559799,- | |||
|coexpression_cluster_id=C65 | |coexpression_cluster_id=C65 | ||
|description=CAGE_peak_1_at_SEMA6B_5end | |description=CAGE_peak_1_at_SEMA6B_5end | ||
Revision as of 14:52, 27 July 2015
| Short description: | p1@SEMA6B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SEMA6B_5end |
| Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
| Association with transcript: | 0bp_to_NM_032108, uc010dud.2, uc010xih.1_5end |
| EntrezGene: | 10501 |
| HGNC: | 10739 |
| UniProt: | Q9H3T3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SEMA6B |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 4.31e-31 | 48 |
| phagocyte | 4.31e-31 | 48 |
| myeloid leukocyte | 6.41e-31 | 72 |
| monopoietic cell | 4.02e-29 | 59 |
| monocyte | 4.02e-29 | 59 |
| monoblast | 4.02e-29 | 59 |
| promonocyte | 4.02e-29 | 59 |
| macrophage dendritic cell progenitor | 1.49e-27 | 61 |
| endothelial cell | 2.35e-26 | 36 |
| classical monocyte | 8.77e-26 | 42 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.22e-25 | 114 |
| immune system | 3.39e-22 | 93 |
| lateral plate mesoderm | 2.71e-19 | 203 |
| bone marrow | 1.42e-18 | 76 |
| hemolymphoid system | 9.67e-18 | 108 |
| blood vessel endothelium | 8.95e-17 | 18 |
| endothelium | 8.95e-17 | 18 |
| cardiovascular system endothelium | 8.95e-17 | 18 |
| bone element | 5.66e-16 | 82 |
| hematopoietic system | 5.87e-14 | 98 |
Showing 1 to 10 of 53 entries
