FFCP PHASE1:Hg19::chr22:31518734..31518756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=27124 | |EntrezGene=entrezgene:27124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8956 | |HGNC=HGNC:8956 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000463528_5end | |association_with_transcript=17bp_to_ENST00000463528_5end | ||
|cluster_id=chr22:31518734..31518756,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_2_at_INPP5J_5end | |description=CAGE_peak_2_at_INPP5J_5end |
Revision as of 20:16, 28 July 2015
Short description: | p2@INPP5J |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_INPP5J_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 17bp_to_ENST00000463528_5end |
EntrezGene: | 27124 |
HGNC: | 8956 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@INPP5J |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mammary gland epithelial cell | 1.69e-07 | 4 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
---|---|---|
intestine | 1.99e-49 | 17 |
small intestine | 4.03e-45 | 4 |
gastrointestinal system | 2.44e-34 | 25 |
colon | 1.92e-25 | 9 |
large intestine | 5.70e-21 | 11 |
duodenum | 1.54e-09 | 2 |
subdivision of digestive tract | 1.33e-07 | 118 |
mammary gland | 1.69e-07 | 4 |
mammary bud | 1.69e-07 | 4 |
mammary ridge | 1.69e-07 | 4 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.69e-07 | 4 |
breast cancer | 1.69e-07 | 4 |
Showing 1 to 2 of 2 entries