UBERON:0005172: Difference between revisions
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|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=abdomen | |name=abdomen element | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000916 | |part_of=UBERON:0000916 | ||
Latest revision as of 17:51, 12 September 2014
| Name: | abdomen element | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An organ that is part of an abdomen [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Subset: | organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005173(abdominal segment element) |
|---|---|
| part_of: | UBERON:0000916(abdomen) |
Children
| is a: | UBERON:0002107 (liver),UBERON:0002113 (kidney),UBERON:0006858 (adrenal/interrenal gland),UBERON:0017672 (abdominal viscera) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
... further results Mouse (Mus musculus)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10081-102A9 (adrenal gland, adult, pool1)
- 10086-102B5 (liver, fetal, pool1)
- 10088-102B7
- 10089-102B8
- 10095-102C5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005172 (abdomen element), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.35e-50 | FFCP PHASE2:Hg19::chr10:99344428..99344441,+#_3c437716ae519ecef9a6f436a6aa98db | p5@PI4K2A |
| 1.35e-50 | FFCP PHASE1:Hg19::chr10:99344428..99344441,+#_3c437716ae519ecef9a6f436a6aa98db | p5@PI4K2A |
| 7.25e-46 | FFCP PHASE2:Hg19::chr16:57831685..57831697,-#_e1b67a19db08a67ccbdcfd79f2db6791 | p7@KIFC3 |
| 7.25e-46 | FFCP PHASE1:Hg19::chr16:57831685..57831697,-#_e1b67a19db08a67ccbdcfd79f2db6791 | p7@KIFC3 |
| 6.78e-43 | FFCP PHASE2:Hg19::chr1:55331310..55331365,-#_aa5c1ccde7367d024808113d00cbf067 | p3@DHCR24 |
| 6.78e-43 | FFCP PHASE1:Hg19::chr1:55331310..55331365,-#_aa5c1ccde7367d024808113d00cbf067 | p3@DHCR24 |
| 1.49e-41 | FFCP PHASE2:Hg19::chr8:21911054..21911086,+#_0caa2d3d23bfa0bc57b83c6abcc9762b | p9@EPB49 |
| 1.49e-41 | FFCP PHASE1:Hg19::chr8:21911054..21911086,+#_0caa2d3d23bfa0bc57b83c6abcc9762b | p9@EPB49 |
| 5.67e-41 | FFCP PHASE1:Hg19::chr11:117695449..117695466,-#_2ed77fa7ddf3ca976db04212b4c95c72 | p1@FXYD2 |
| 5.67e-41 | FFCP PHASE2:Hg19::chr11:117695449..117695466,-#_2ed77fa7ddf3ca976db04212b4c95c72 | p1@FXYD2 |
| 7.6e-41 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_de8b623b112c2db593727d94d98c92ed | p4@PAX2 |
| 7.6e-41 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_de8b623b112c2db593727d94d98c92ed | p4@PAX2 |
| 7.31e-40 | FFCP PHASE2:Mm9::chr4:95246108..95246119,+#_2b740aeae2a7c079cc34b690ad9d57ab | p4@Fggy |
| 7.31e-40 | FFCP PHASE1:Mm9::chr4:95246108..95246119,+#_2b740aeae2a7c079cc34b690ad9d57ab | p4@Fggy |
| 3.21e-39 | FFCP PHASE2:Mm9::chr12:58298278..58298292,-#_e7145ce48f23287e1982701ef574cb62 | p4@Slc25a21 |
| 3.21e-39 | FFCP PHASE1:Mm9::chr12:58298278..58298292,-#_e7145ce48f23287e1982701ef574cb62 | p4@Slc25a21 |
| 1.15e-38 | FFCP PHASE2:Mm9::chr12:58298298..58298317,-#_797a89d12b13497722568abfd8432632 | p3@Slc25a21 |
| 1.15e-38 | FFCP PHASE1:Mm9::chr12:58298298..58298317,-#_797a89d12b13497722568abfd8432632 | p3@Slc25a21 |
| 4.6e-38 | FFCP PHASE2:Mm9::chr12:58298249..58298262,-#_b8bf2b0d4c0d8bd406f4e4f4915495d0 | p5@Slc25a21 |
| 4.6e-38 | FFCP PHASE1:Mm9::chr12:58298249..58298262,-#_b8bf2b0d4c0d8bd406f4e4f4915495d0 | p5@Slc25a21 |
| 4.65e-37 | FFCP PHASE1:Mm9::chr4:129255765..129255776,-#_7f49dcf04f548c411e9ca6eccd157ffb | p2@Fam167b |
| 4.65e-37 | FFCP PHASE2:Mm9::chr4:129255765..129255776,-#_7f49dcf04f548c411e9ca6eccd157ffb | p2@Fam167b |
| 4.76e-37 | FFCP PHASE1:Hg19::chr20:42187656..42187673,+#_b443addd8212b2a465fca2d316171cda | p2@SGK2 |
| 4.76e-37 | FFCP PHASE2:Hg19::chr20:42187656..42187673,+#_b443addd8212b2a465fca2d316171cda | p2@SGK2 |
| 3.18e-36 | FFCP PHASE2:Hg19::chr7:44580918..44580934,-#_71311726d44c765fb760744a584b9793 | p2@NPC1L1 |
| 3.18e-36 | FFCP PHASE1:Hg19::chr7:44580918..44580934,-#_71311726d44c765fb760744a584b9793 | p2@NPC1L1 |
| 5.26e-36 | FFCP PHASE2:Hg19::chr7:44580861..44580912,-#_e7d2b461d928e389f9001253855f4925 | p1@NPC1L1 |
| 5.26e-36 | FFCP PHASE1:Hg19::chr7:44580861..44580912,-#_e7d2b461d928e389f9001253855f4925 | p1@NPC1L1 |
| 8.22e-36 | FFCP PHASE2:Mm9::chr6:34129226..34129246,+#_402618d0c20f69aa0faaf45ca8ab1668 | p2@ENSMUST00000145644 |
| 8.22e-36 | FFCP PHASE1:Mm9::chr6:34129226..34129246,+#_402618d0c20f69aa0faaf45ca8ab1668 | p2@ENSMUST00000145644 |
| 1.41e-35 | FFCP PHASE2:Mm9::chr10:58904532..58904548,-#_7f38209f7bd1ba1b16121202b0c5396e | p3@Oit3 |
| 1.41e-35 | FFCP PHASE1:Mm9::chr10:58904532..58904548,-#_7f38209f7bd1ba1b16121202b0c5396e | p3@Oit3 |
| 1.53e-35 | FFCP PHASE2:Mm9::chr8:73247943..73247958,+#_424d59b17287532a74b59c595a4a6178 | p3@Pde4c |
| 1.53e-35 | FFCP PHASE1:Mm9::chr8:73247943..73247958,+#_424d59b17287532a74b59c595a4a6178 | p3@Pde4c |
| 3.31e-35 | FFCP PHASE2:Mm9::chr9:44611035..44611044,-#_6528d9d8a92e70c03a175923ddd885c8 | p4@Ttc36 |
| 3.31e-35 | FFCP PHASE1:Mm9::chr9:44611035..44611044,-#_6528d9d8a92e70c03a175923ddd885c8 | p4@Ttc36 |
| 4.76e-35 | FFCP PHASE2:Hg19::chr4:155484103..155484147,+#_813b25a92c64596ce9fb2cbd3d3bf1e8 | p2@FGB |
| 4.76e-35 | FFCP PHASE1:Hg19::chr4:155484103..155484147,+#_813b25a92c64596ce9fb2cbd3d3bf1e8 | p2@FGB |
| 8.38e-35 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_68d351cd22000b7ac696833d855ed884 | p7@HOXA10 |
| 8.38e-35 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_68d351cd22000b7ac696833d855ed884 | p7@HOXA10 |
| 1.64e-34 | FFCP PHASE2:Mm9::chr19:12707997..12708015,+#_b80f98b2a328f5011fb85c24b055f3b2 | p1@Glyat |
| 1.64e-34 | FFCP PHASE1:Mm9::chr19:12707997..12708015,+#_b80f98b2a328f5011fb85c24b055f3b2 | p1@Glyat |
| 2.61e-34 | FFCP PHASE1:Mm9::chr11:60622345..60622377,-#_7e841019d2f1f0fe09484b5e93d8dede | p@chr11:60622345..60622377, - |
| 2.61e-34 | FFCP PHASE1:Hg19::chr19:1826957..1826984,-#_7095b54194c31b0e3cefa03b2645af2c | p@chr19:1826957..1826984, - |
| 2.61e-34 | FFCP PHASE2:Hg19::chr19:1826957..1826984,-#_7095b54194c31b0e3cefa03b2645af2c | p@chr19:1826957..1826984, - |
| 2.61e-34 | FFCP PHASE2:Mm9::chr11:60622345..60622377,-#_7e841019d2f1f0fe09484b5e93d8dede | p@chr11:60622345..60622377, - |
| 3.01e-34 | FFCP PHASE1:Hg19::chr7:5461523..5461542,-#_667a09ac9d2cefda548248cfd10ae63e | p7@TNRC18 |
| 3.01e-34 | FFCP PHASE2:Hg19::chr7:5461523..5461542,-#_667a09ac9d2cefda548248cfd10ae63e | p7@TNRC18 |
| 3.02e-34 | FFCP PHASE2:Hg19::chr2:74669504..74669520,-#_f84be5d8b588b8c6bbc08ce7e1a46558 | p9@RTKN |
| 3.02e-34 | FFCP PHASE1:Hg19::chr2:74669504..74669520,-#_f84be5d8b588b8c6bbc08ce7e1a46558 | p9@RTKN |
| 5.07e-34 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_124af10d936cc7fa9799f1373e350e74 | p1@ENST00000418041, p1@ENST00000443104 |
| 5.07e-34 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_124af10d936cc7fa9799f1373e350e74 | p1@ENST00000418041, p1@ENST00000443104 |
| 5.11e-34 | FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_462cdceb631ebe81b28d0605b7a6ae61 | p5@NR1H4 |
| 5.11e-34 | FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_462cdceb631ebe81b28d0605b7a6ae61 | p5@NR1H4 |
| 8.0e-34 | FFCP PHASE2:Mm9::chr11:7097807..7097814,+#_07370d29625738b328467c3334fad88c | p2@Igfbp1 |
| 8.0e-34 | FFCP PHASE1:Mm9::chr11:7097807..7097814,+#_07370d29625738b328467c3334fad88c | p2@Igfbp1 |
| 1.07e-33 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_72d4903988625e9a7c142e04497352e2 | p3@PAX2 |
| 1.07e-33 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_72d4903988625e9a7c142e04497352e2 | p3@PAX2 |
| 1.27e-33 | FFCP PHASE2:Mm9::chr13:23931270..23931311,+#_a1736d61b33afd35a3f036f791b7e56b | p2@Slc17a3 |
| 1.27e-33 | FFCP PHASE1:Mm9::chr13:23931270..23931311,+#_a1736d61b33afd35a3f036f791b7e56b | p2@Slc17a3 |
| 1.4e-33 | FFCP PHASE1:Mm9::chr4:95246137..95246153,+#_c136ad32460a72b1e9fa8963c2dddc4e | p3@Fggy |
| 1.4e-33 | FFCP PHASE2:Mm9::chr4:95246137..95246153,+#_c136ad32460a72b1e9fa8963c2dddc4e | p3@Fggy |
| 1.76e-33 | FFCP PHASE2:Mm9::chr16:37621995..37622022,-#_9276ae15e65eefd388682f04b84984dd | p@chr16:37621995..37622022, - |
| 1.76e-33 | FFCP PHASE1:Mm9::chr16:37621995..37622022,-#_9276ae15e65eefd388682f04b84984dd | p@chr16:37621995..37622022, - |
| 1.77e-33 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_946e96eecd7405acad4b3615c1ad9203 | p@chr18:3456189..3456200, + |
| 1.77e-33 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_946e96eecd7405acad4b3615c1ad9203 | p@chr18:3456189..3456200, + |
| 2.2e-33 | FFCP PHASE1:Mm9::chr4:96330769..96330789,-#_607254efb150397be3b0ef5049f10114 | p2@Cyp2j5 |
| 2.2e-33 | FFCP PHASE2:Mm9::chr4:96330769..96330789,-#_607254efb150397be3b0ef5049f10114 | p2@Cyp2j5 |
| 2.92e-33 | FFCP PHASE1:Mm9::chr13:23931467..23931489,+#_edc4b822fab308ab9285345237892d48 | p3@Slc17a3 |
| 2.92e-33 | FFCP PHASE2:Mm9::chr13:23931467..23931489,+#_edc4b822fab308ab9285345237892d48 | p3@Slc17a3 |
| 5.26e-33 | FFCP PHASE2:Mm9::chr16:37580223..37580237,+#_82d874488009a4effd16ea9100c58306 | p4@Hgd |
| 5.26e-33 | FFCP PHASE1:Mm9::chr16:37580223..37580237,+#_82d874488009a4effd16ea9100c58306 | p4@Hgd |
| 5.56e-33 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_41227dbf6bc146dee90fd78fe70658b2 | p@chr2:693380..693398, + |
| 5.56e-33 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_41227dbf6bc146dee90fd78fe70658b2 | p@chr2:693380..693398, + |
| 8.68e-33 | FFCP PHASE2:Mm9::chr1:141398256..141398267,+#_290ae71c6548cb53212a31b75a73d6d1 | p3@F13b |
| 8.68e-33 | FFCP PHASE1:Mm9::chr1:141398256..141398267,+#_290ae71c6548cb53212a31b75a73d6d1 | p3@F13b |
| 1.09e-32 | FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_c4c31a66235c9d4ab3c03bfc06c8ef14 | p1@ENST00000421143 |
| 1.09e-32 | FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_c4c31a66235c9d4ab3c03bfc06c8ef14 | p1@ENST00000421143 |
| 1.21e-32 | FFCP PHASE2:Mm9::chr15:82624876..82624892,-#_4c710c5bdb1b07f22e26e91133b3286d | p5@Cyp2d26 |
| 1.21e-32 | FFCP PHASE1:Mm9::chr15:82624876..82624892,-#_4c710c5bdb1b07f22e26e91133b3286d | p5@Cyp2d26 |
| 1.25e-32 | FFCP PHASE2:Mm9::chr10:95305558..95305580,-#_7b4c9b3085230ea76bbbb004e9900508 | p@chr10:95305558..95305580, - |
| 1.25e-32 | FFCP PHASE1:Mm9::chr10:95305558..95305580,-#_7b4c9b3085230ea76bbbb004e9900508 | p@chr10:95305558..95305580, - |
| 1.68e-32 | FFCP PHASE1:Mm9::chr9:44609886..44609901,-#_4c31e83086675c35f7b27978e6bd800c | p@chr9:44609886..44609901, - |
| 1.68e-32 | FFCP PHASE2:Mm9::chr9:44609886..44609901,-#_4c31e83086675c35f7b27978e6bd800c | p@chr9:44609886..44609901, - |
| 1.75e-32 | FFCP PHASE2:Mm9::chr16:37580298..37580310,+#_01fea15df5ed2dbb5f59d1729abd0fff | p3@Hgd |
| 1.75e-32 | FFCP PHASE1:Mm9::chr16:37580298..37580310,+#_01fea15df5ed2dbb5f59d1729abd0fff | p3@Hgd |
| 2.0e-32 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_49078a51fb16f77a8e1770c52a25ed16 | p2@PAX2 |
| 2.0e-32 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_49078a51fb16f77a8e1770c52a25ed16 | p2@PAX2 |
| 2.22e-32 | FFCP PHASE1:Hg19::chr12:100867695..100867706,+#_8e4e8fd49cf950f85d588bfe206fe1f7 | p6@NR1H4 |
| 2.22e-32 | FFCP PHASE2:Hg19::chr12:100867695..100867706,+#_8e4e8fd49cf950f85d588bfe206fe1f7 | p6@NR1H4 |
| 2.68e-32 | FFCP PHASE1:Mm9::chr15:9265320..9265378,+#_4273814271b9fe1131030142bb30f29c | p1@Ugt3a2 |
| 2.68e-32 | FFCP PHASE2:Mm9::chr15:9265320..9265378,+#_4273814271b9fe1131030142bb30f29c | p1@Ugt3a2 |
| 3.54e-32 | FFCP PHASE2:Mm9::chr4:150283537..150283568,-#_9a16c9e62697b9dfc4e42b2efa70e7f4 | p5@Park7 |
| 3.54e-32 | FFCP PHASE1:Mm9::chr4:150283537..150283568,-#_9a16c9e62697b9dfc4e42b2efa70e7f4 | p5@Park7 |
| 3.97e-32 | FFCP PHASE2:Mm9::chr9:44609861..44609874,-#_2f1c324c31d1326b0481933f0bc992c0 | p@chr9:44609861..44609874, - |
| 3.97e-32 | FFCP PHASE1:Mm9::chr9:44609861..44609874,-#_2f1c324c31d1326b0481933f0bc992c0 | p@chr9:44609861..44609874, - |
| 4.46e-32 | FFCP PHASE2:Hg19::chr15:58724170..58724183,+#_0ff9db4fae351149bf71a11d0eb0e816 | p3@LIPC |
| 4.46e-32 | FFCP PHASE1:Hg19::chr15:58724170..58724183,+#_0ff9db4fae351149bf71a11d0eb0e816 | p3@LIPC |
| 4.57e-32 | FFCP PHASE1:Hg19::chr15:58724184..58724197,+#_0e57ce585e0417cfdda426c68a13c736 | p2@LIPC |
| 4.57e-32 | FFCP PHASE2:Hg19::chr15:58724184..58724197,+#_0e57ce585e0417cfdda426c68a13c736 | p2@LIPC |
