FFCP PHASE1:Hg19::chr13:45010857..45010868,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16826 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 11:21, 17 September 2015
| Short description: | p16@TSC22D1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_16_at_TSC22D1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 110bp_to_uc001uzm.3_5end |
| EntrezGene: | TSC22D1 |
| HGNC: | 16826 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p16@TSC22D1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 2.40e-19 | 3 |
| ciliated epithelial cell | 2.40e-19 | 3 |
| multi-ciliated epithelial cell | 2.40e-19 | 3 |
| non-pigmented ciliary epithelial cell | 2.40e-19 | 3 |
| chorionic membrane mesenchymal stem cell | 2.96e-09 | 3 |
| columnar/cuboidal epithelial cell | 1.36e-07 | 27 |
| meningothelial cell | 4.60e-07 | 1 |
| crystallin accumulating cell | 5.05e-07 | 4 |
| vertebrate lens cell | 5.05e-07 | 4 |
| lens epithelial cell | 5.05e-07 | 4 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| ciliary epithelium | 2.40e-19 | 3 |
| ciliary body | 2.40e-19 | 3 |
| atypical epithelium | 1.20e-14 | 4 |
| pigment epithelium of eye | 6.90e-14 | 11 |
| anterior segment of eyeball | 7.37e-11 | 14 |
| vasculature of eye | 6.35e-10 | 6 |
| uvea | 6.35e-10 | 6 |
| vasculature of head | 6.35e-10 | 6 |
| face | 1.97e-09 | 22 |
| egg chorion | 2.96e-09 | 3 |
Showing 1 to 10 of 83 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system cancer | 4.60e-07 | 1 |
| meningioma | 4.60e-07 | 1 |
| cystadenocarcinoma | 5.84e-07 | 1 |
| mucinous cystadenocarcinoma | 5.84e-07 | 1 |
Showing 1 to 4 of 4 entries
