FFCP PHASE1:Hg19::chr19:55477738..55477774,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=22948 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NX02,Q8WX94 | ||
|association_with_transcript=0bp_to_ENST00000263437,ENST00000427260,ENST00000538819,uc002qij.2,uc010esn.2,uc010eso.2,uc010esp.2,uc010yfp.1_5end | |association_with_transcript=0bp_to_ENST00000263437,ENST00000427260,ENST00000538819,uc002qij.2,uc010esn.2,uc010eso.2,uc010esp.2,uc010yfp.1_5end | ||
|cluster_id=chr19:55477738..55477774,+ | |cluster_id=chr19:55477738..55477774,+ |
Latest revision as of 23:25, 19 September 2015
Short description: | p1@NLRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NLRP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263437, ENST00000427260, ENST00000538819, uc002qij.2, uc010esn.2, uc010eso.2, uc010esp.2, uc010yfp.1_5end |
EntrezGene: | NLRP2 |
HGNC: | 22948 |
UniProt: | Q9NX02Q8WX94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NLRP2 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.88e-14 | 10 |
nephron tubule epithelial cell | 3.88e-14 | 10 |
germ line cell | 6.40e-13 | 7 |
germ cell | 6.40e-13 | 7 |
epithelial cell | 9.44e-10 | 253 |
epithelial cell of nephron | 9.95e-09 | 15 |
kidney cell | 1.81e-07 | 17 |
kidney epithelial cell | 1.81e-07 | 17 |
kidney cortical cell | 3.90e-07 | 12 |
renal cortical epithelial cell | 3.90e-07 | 12 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.88e-14 | 10 |
nephron epithelium | 9.95e-09 | 15 |
renal tubule | 9.95e-09 | 15 |
nephron tubule | 9.95e-09 | 15 |
nephron | 9.95e-09 | 15 |
uriniferous tubule | 9.95e-09 | 15 |
nephrogenic mesenchyme | 9.95e-09 | 15 |
excretory tube | 4.66e-08 | 16 |
kidney epithelium | 4.66e-08 | 16 |
testis | 5.02e-08 | 8 |
Showing 1 to 10 of 16 entries