FFCP PHASE2:Hg19::chr1:236686717..236686738,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3964 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6569 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6569 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O00214 | ||
|association_with_transcript=0bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | |association_with_transcript=0bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | ||
|cluster_id=chr1:236686717..236686738,+ | |cluster_id=chr1:236686717..236686738,+ |
Latest revision as of 14:19, 16 September 2015
Short description: | p7@LGALS8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LGALS8_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 0bp_to_ENST00000341872, ENST00000450372, NM_006499, NM_201543, uc001hxy.1, uc001hxz.1, uc009xgg.1_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | O00214 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@LGALS8 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endodermal cell | 2.03e-14 | 58 |
hepatocyte | 1.46e-10 | 12 |
epithelial cell | 3.28e-09 | 253 |
lung fibroblast | 7.77e-07 | 1 |
peptide hormone secreting cell | 9.67e-07 | 1 |
enteroendocrine cell | 9.67e-07 | 1 |
type D enteroendocrine cell | 9.67e-07 | 1 |
somatostatin secreting cell | 9.67e-07 | 1 |
pancreatic D cell | 9.67e-07 | 1 |
progenitor cell of endocrine pancreas | 9.67e-07 | 1 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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pancreas | 1.98e-12 | 10 |
endocrine system | 1.78e-09 | 45 |
hepatic diverticulum | 6.13e-08 | 22 |
liver primordium | 6.13e-08 | 22 |
digestive tract diverticulum | 1.44e-07 | 23 |
epithelial sac | 6.48e-07 | 25 |
epithelium of foregut-midgut junction | 6.48e-07 | 25 |
anatomical boundary | 6.48e-07 | 25 |
hepatobiliary system | 6.48e-07 | 25 |
foregut-midgut junction | 6.48e-07 | 25 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.63e-21 | 106 |
cell type cancer | 1.20e-20 | 143 |
cancer | 1.63e-13 | 235 |
disease of cellular proliferation | 4.21e-13 | 239 |
disease of anatomical entity | 1.58e-11 | 39 |
squamous cell carcinoma | 3.42e-09 | 14 |
somatostatinoma | 9.67e-07 | 1 |
Showing 1 to 7 of 7 entries