FFCP PHASE2:Hg19::chr3:145940083..145940098,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57088 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16497 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16497 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9J3P9 | ||
|association_with_transcript=59bp_to_ENST00000498625_5end | |association_with_transcript=59bp_to_ENST00000498625_5end | ||
|cluster_id=chr3:145940083..145940098,- | |cluster_id=chr3:145940083..145940098,- |
Latest revision as of 06:36, 25 September 2015
Short description: | p6@PLSCR4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLSCR4_5end |
Coexpression cluster: | C4290_Lymphatic_Hepatocyte_liver_adipose_breast_Renal_vagina |
Association with transcript: | 59bp_to_ENST00000498625_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | C9J3P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@PLSCR4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lymphangioblast | 3.24e-19 | 6 |
endothelial cell of lymphatic vessel | 3.24e-19 | 6 |
vascular lymphangioblast | 3.24e-19 | 6 |
endothelial cell of vascular tree | 8.48e-17 | 24 |
endothelial cell | 2.45e-15 | 36 |
hepatocyte | 1.91e-13 | 12 |
meso-epithelial cell | 9.15e-12 | 45 |
lining cell | 1.41e-08 | 58 |
barrier cell | 1.41e-08 | 58 |
capillary endothelial cell | 8.80e-07 | 3 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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lymphoid system | 4.77e-16 | 10 |
digestive tract diverticulum | 1.18e-14 | 23 |
liver | 1.61e-14 | 19 |
digestive gland | 1.61e-14 | 19 |
liver bud | 1.61e-14 | 19 |
lymphatic vessel | 2.42e-14 | 8 |
lymph vasculature | 2.42e-14 | 8 |
lymphatic part of lymphoid system | 2.42e-14 | 8 |
sac | 9.00e-13 | 26 |
hepatic diverticulum | 2.36e-12 | 22 |
Showing 1 to 10 of 29 entries