FFCP PHASE2:Mm9::chr1:183282749..183282772,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:72978 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:Q6ZWS4,uniprot:Q9D6E1,uniprot:G3XA11 |associ...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=72978 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q6ZWS4,Q9D6E1,G3XA11 | ||
|association_with_transcript=0bp_to_ENSMUST00000027795,ENSMUST00000161880,NM_001160211,NM_001160212,NM_028408,uc007dxh.2,uc007dxi.2,uc011wxs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000027795,ENSMUST00000161880,NM_001160211,NM_001160212,NM_028408,uc007dxh.2,uc007dxi.2,uc011wxs.1_5end | ||
|cluster_id=chr1:183282749..183282772,+ | |cluster_id=chr1:183282749..183282772,+ | ||
Latest revision as of 22:35, 26 September 2015
| Short description: | p2@Cnih3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Cnih3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 0bp_to_ENSMUST00000027795, ENSMUST00000161880, NM_001160211, NM_001160212, NM_028408, uc007dxh.2, uc007dxi.2, uc011wxs.1_5end |
| EntrezGene: | Cnih3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Cnih3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.27e-16 | 23 |
| neuroblast (sensu Vertebrata) | 1.27e-16 | 23 |
| neuron | 1.89e-11 | 33 |
| neuronal stem cell | 1.89e-11 | 33 |
| neuroblast | 1.89e-11 | 33 |
| electrically signaling cell | 1.89e-11 | 33 |
| neuron of cerebral cortex | 4.58e-09 | 6 |
| electrically responsive cell | 6.12e-09 | 39 |
| electrically active cell | 6.12e-09 | 39 |
| neural cell | 1.33e-08 | 43 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 3.68e-35 | 54 |
| gray matter | 2.80e-34 | 34 |
| neural tube | 2.03e-32 | 52 |
| neural rod | 2.03e-32 | 52 |
| future spinal cord | 2.03e-32 | 52 |
| neural keel | 2.03e-32 | 52 |
| central nervous system | 3.74e-31 | 73 |
| brain grey matter | 8.93e-31 | 29 |
| regional part of telencephalon | 8.93e-31 | 29 |
| telencephalon | 8.93e-31 | 29 |
Showing 1 to 10 of 41 entries
