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(Created page with "{{CL |id=CL:0000048 |name=multi fate stem cell |namespace=cell |def="A stem cell that can give rise to multiple lineages of cells." [GOC:add] |xref=FMA:84789 |is_a=CL:00...")
 
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{{CL
{{CL
|id=CL:0000048
|id=CL:0000048
|name=multi fate stem cell
|name=multipotent stem cell
|namespace=cell
|namespace=efo
|def="A stem cell that can give rise to multiple lineages of cells." [GOC:add]
|def="A stem cell that can give rise to multiple lineages of cells." [GOC:add]
|xref=FMA:84789
|xref=FMA:84789
|is_a=CL:0000723
|is_a=CL:0000034;;CL:0000723
|synonym="multi-fate stem cell" EXACT [];;"multifate stem cell" EXACT [];;"Multipotent cell" EXACT [];;"multipotent stem cell" EXACT []
|synonym="multi-fate stem cell" EXACT [];;"multifate stem cell" EXACT [];;"multipotent cell" EXACT [];;"multipotent stem cell" EXACT []
|comment=
|comment=
|alt_id=
|alt_id=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:35, 15 June 2012

Name:multipotent stem cell
Namespace:efo
Definition:"A stem cell that can give rise to multiple lineages of cells." [GOC:add]
Xrefs:
links:
FMA:84789
Synonyms: "multi-fate stem cell" EXACT []
"multifate stem cell" EXACT []
"multipotent cell" EXACT []
"multipotent stem cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000034(stem cell),CL:0000723(somatic stem cell)



Children


is a:CL:0000037 (hematopoietic stem cell),CL:0000047 (neuronal stem cell),CL:0000134 (mesenchymal cell),CL:0000355 (multi-potent skeletal muscle stem cell),CL:0002195 (hepatic stem cell),CL:0002250 (intestinal crypt stem cell),CL:0002351 (progenitor cell of endocrine pancreas),CL:0005020 (lymphangioblast),CL:0005026 (hepatoblast)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000048 (multipotent stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data