UBERON:0004573: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0004571 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:36, 27 June 2012
| Name: | systemic artery | ||
|---|---|---|---|
| Definition: | "Systemic arteries are the arteries of the systemic circulation, which is the part of the cardiovascular system which carries oxygenated blood away from the heart, to the body, and returns deoxygenated blood back to the heart." [Wikipedia:Artery#Systemic_arteries] | ||
| Xrefs: |
| ||
| Synonyms: | "systemic arterial subtree" EXACT [FMA:66464] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001637(artery) |
|---|---|
| part_of: | UBERON:0004571(systemic arterial system) |
Children
| is a: | UBERON:0001529 (brachiocephalic artery),UBERON:0001533 (subclavian artery),UBERON:0001621 (coronary artery),UBERON:0002456 (internal thoracic artery),UBERON:0005396 (carotid artery segment) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
- 11285-116I7 (Smooth Muscle Cells - Carotid, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11284-116I6 (Smooth Muscle Cells - Brachiocephalic, donor1)
- 11285-116I7 (Smooth Muscle Cells - Carotid, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004573 (systemic artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.46e-86 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_3383e9ae00d1f4c13785bf18adb9d4dd | p6@Npy1r |
| 1.46e-86 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_3383e9ae00d1f4c13785bf18adb9d4dd | p6@Npy1r |
| 2.32e-83 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_1d7e798fdcd45d0e214d2bcd22ede7b9 | p@chr6:53359400..53359406, + |
| 2.32e-83 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_1d7e798fdcd45d0e214d2bcd22ede7b9 | p@chr6:53359400..53359406, + |
| 7.36e-70 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_8dedc91c44743a344301215bf69a8aa6 | p5@Npy1r |
| 7.36e-70 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_8dedc91c44743a344301215bf69a8aa6 | p5@Npy1r |
| 2.47e-69 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_ad38d04f4d39e1ba5ab5aeae967dbef1 | p@chr2:65009852..65009866, - |
| 2.47e-69 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_ad38d04f4d39e1ba5ab5aeae967dbef1 | p@chr2:65009852..65009866, - |
| 3.45e-66 | FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_4bd369658463bff6c624d1fc84651959 | p@chr4:54931911..54931926, - |
| 3.45e-66 | FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_4bd369658463bff6c624d1fc84651959 | p@chr4:54931911..54931926, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_22baebfadd064119744ea3858e1f411f | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_22baebfadd064119744ea3858e1f411f | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_22baebfadd064119744ea3858e1f411f | p@chr17:14802633..14802637, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_22baebfadd064119744ea3858e1f411f | p@chr8:69228447..69228492, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_22baebfadd064119744ea3858e1f411f | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_22baebfadd064119744ea3858e1f411f | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_22baebfadd064119744ea3858e1f411f | p5@Adamts2 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_22baebfadd064119744ea3858e1f411f | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_22baebfadd064119744ea3858e1f411f | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_22baebfadd064119744ea3858e1f411f | p@chr2:112043522..112043530, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_22baebfadd064119744ea3858e1f411f | p@chr2:178190171..178190178, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_22baebfadd064119744ea3858e1f411f | p@chrX:160839744..160839754, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_22baebfadd064119744ea3858e1f411f | p@chr2:112043522..112043530, - |
| 2.83e-65 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_22baebfadd064119744ea3858e1f411f | p@chr17:87574327..87574332, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_22baebfadd064119744ea3858e1f411f | p@chr17:14827154..14827169, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_22baebfadd064119744ea3858e1f411f | p@chr17:14802633..14802637, - |
| 3.79e-61 | FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_e3b36c3a1863dc2e8c69492a3bf22eb0 | p@chr12:96830430..96830450, + |
| 3.79e-61 | FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_e3b36c3a1863dc2e8c69492a3bf22eb0 | p@chr12:96830430..96830450, + |
| 1.02e-60 | FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_198c2e0d59789749ad03b5785b2aedae | p4@MMP1 |
| 1.02e-60 | FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_198c2e0d59789749ad03b5785b2aedae | p4@MMP1 |
| 1.24e-59 | FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_3122bc9a76c5c0b22a0fb2edaa48c18a | p@chr11:102668178..102668206, + |
| 1.24e-59 | FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_3122bc9a76c5c0b22a0fb2edaa48c18a | p@chr11:102668178..102668206, + |
| 2.92e-59 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_986e03da7af6e5b0ae10c391dc0622cd | p@chr4:7846444..7846449, - |
| 2.92e-59 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_986e03da7af6e5b0ae10c391dc0622cd | p@chr4:7846444..7846449, - |
| 1.7e-58 | FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_e46a9d7054f67201fb478efd73a16aaa | p2@SOX17 |
| 1.7e-58 | FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_e46a9d7054f67201fb478efd73a16aaa | p2@SOX17 |
| 2.75e-58 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_e247d5acf47714f01f2ccb925d4df72d | p@chr11:102661517..102661541, - |
| 2.75e-58 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_e247d5acf47714f01f2ccb925d4df72d | p@chr11:102661517..102661541, - |
| 5.83e-58 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_29cdb4dd178ea11f4234efda27683897 | p@chr3:106484411..106484418, + |
| 5.83e-58 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_29cdb4dd178ea11f4234efda27683897 | p@chr3:106484411..106484418, + |
| 7.95e-58 | FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_21acd8c9777528fb34d67478b3cb5caf | p@chr11:102662162..102662217, - |
| 7.95e-58 | FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_21acd8c9777528fb34d67478b3cb5caf | p@chr11:102662162..102662217, - |
| 6.81e-57 | FFCP PHASE2:Hg19::chr4:54931877..54931892,-#_77b775306a3366155b2198719b010985 | p@chr4:54931877..54931892, - |
| 6.81e-57 | FFCP PHASE1:Hg19::chr4:54931877..54931892,-#_77b775306a3366155b2198719b010985 | p@chr4:54931877..54931892, - |
| 9.57e-57 | FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_c4009426f4e10e17a6b918459d59675e | p1@ENST00000439823 |
| 9.57e-57 | FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_c4009426f4e10e17a6b918459d59675e | p1@ENST00000439823 |
| 3.21e-56 | FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_8c963b36b0ca8b279e409a294d06ca42 | p@chr22:21138313..21138336, + |
| 3.21e-56 | FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_8c963b36b0ca8b279e409a294d06ca42 | p@chr22:21138313..21138336, + |
| 2.02e-55 | FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_7cf0fe8d60cd423a4eb64dd183cd6012 | p@chr3:30334038..30334060, + |
| 2.02e-55 | FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_7cf0fe8d60cd423a4eb64dd183cd6012 | p@chr3:30334038..30334060, + |
| 6.19e-55 | FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_116422807a0f63047774238475ed8e2d | p3@MMP1 |
| 6.19e-55 | FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_116422807a0f63047774238475ed8e2d | p3@MMP1 |
| 9.6e-54 | FFCP PHASE2:Hg19::chr2:228735763..228735772,+#_f44b3b4829e24565baad6a39ddb29cf7 | p2@WDR69 |
| 9.6e-54 | FFCP PHASE1:Hg19::chr2:228735763..228735772,+#_f44b3b4829e24565baad6a39ddb29cf7 | p2@WDR69 |
| 3.87e-53 | FFCP PHASE1:Hg19::chr11:102661061..102661115,-#_29860cca7e67a056c93edc334394f51c | p@chr11:102661061..102661115, - |
| 3.87e-53 | FFCP PHASE2:Hg19::chr11:102661061..102661115,-#_29860cca7e67a056c93edc334394f51c | p@chr11:102661061..102661115, - |
| 4.15e-53 | FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_a55b3c2931d6304c00e92abe2b518ffc | p@chr11:102668708..102668742, + |
| 4.15e-53 | FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_a55b3c2931d6304c00e92abe2b518ffc | p@chr11:102668708..102668742, + |
| 1.01e-52 | FFCP PHASE2:Hg19::chr11:102668160..102668174,+#_411cffac8d3c1ce02f474f3b9a56595f | p@chr11:102668160..102668174, + |
| 1.01e-52 | FFCP PHASE1:Hg19::chr11:102668160..102668174,+#_411cffac8d3c1ce02f474f3b9a56595f | p@chr11:102668160..102668174, + |
| 1.29e-51 | FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_7331994ebf3177fd97a9b39ff70b0133 | p4@SULT1B1 |
| 1.29e-51 | FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_7331994ebf3177fd97a9b39ff70b0133 | p4@SULT1B1 |
| 1.41e-51 | FFCP PHASE2:Hg19::chr8:42037883..42037900,-#_7a084f5fe4dc54098beeda69a795c278 | p@chr8:42037883..42037900, - |
| 1.41e-51 | FFCP PHASE1:Hg19::chr8:42037883..42037900,-#_7a084f5fe4dc54098beeda69a795c278 | p@chr8:42037883..42037900, - |
| 3.51e-51 | FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_44fe691a5e30f127bf725aaf28682d77 | p@chr11:102667477..102667490, - |
| 3.51e-51 | FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_44fe691a5e30f127bf725aaf28682d77 | p@chr11:102667477..102667490, - |
| 9.34e-51 | FFCP PHASE2:Mm9::chr17:75578018..75578028,+#_006c97e19766a9ccaaad597f9e5b661b | p14@Ltbp1 |
| 9.34e-51 | FFCP PHASE1:Mm9::chr17:75578018..75578028,+#_006c97e19766a9ccaaad597f9e5b661b | p14@Ltbp1 |
| 1.57e-50 | FFCP PHASE1:Hg19::chr4:74703963..74703975,+#_95b9e34c7251b7246820320350fee254 | p@chr4:74703963..74703975, + |
| 1.57e-50 | FFCP PHASE2:Hg19::chr4:74703963..74703975,+#_95b9e34c7251b7246820320350fee254 | p@chr4:74703963..74703975, + |
| 1.67e-50 | FFCP PHASE2:Mm9::chr10:67598016..67598032,-#_ab5dbbf3b64682bf444ebc3f17430505 | p@chr10:67598016..67598032, - |
| 1.67e-50 | FFCP PHASE1:Mm9::chr10:67598016..67598032,-#_ab5dbbf3b64682bf444ebc3f17430505 | p@chr10:67598016..67598032, - |
| 2.23e-50 | FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_238378d78da3357491660c4d529e9e22 | p@chr22:21138343..21138378, + |
| 2.23e-50 | FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_238378d78da3357491660c4d529e9e22 | p@chr22:21138343..21138378, + |
| 2.49e-50 | FFCP PHASE2:Hg19::chr11:102663449..102663467,-#_6c2e9ee2f82608414f07a47e9b8f40d8 | p@chr11:102663449..102663467, - |
| 2.49e-50 | FFCP PHASE1:Hg19::chr11:102663449..102663467,-#_6c2e9ee2f82608414f07a47e9b8f40d8 | p@chr11:102663449..102663467, - |
| 9.42e-50 | FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_925925b2f28469f471ce999e4af1c99d | p@chr10:4823096..4823144, - |
| 9.42e-50 | FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_925925b2f28469f471ce999e4af1c99d | p@chr10:4823096..4823144, - |
| 9.47e-50 | FFCP PHASE2:Hg19::chr11:102661460..102661475,-#_fcb5b2aaab94f39a369917321d94fe8e | p@chr11:102661460..102661475, - |
| 9.47e-50 | FFCP PHASE1:Hg19::chr11:102661460..102661475,-#_fcb5b2aaab94f39a369917321d94fe8e | p@chr11:102661460..102661475, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_c7193bd75c6bd2256826e031e57a23bd | p@chrX:160840048..160840057, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_c7193bd75c6bd2256826e031e57a23bd | p5@Myl12b |
| 1.6e-49 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_c7193bd75c6bd2256826e031e57a23bd | p@chrX:160840048..160840057, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_c7193bd75c6bd2256826e031e57a23bd | p@chr11:118164535..118164544, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_c7193bd75c6bd2256826e031e57a23bd | p5@Myl12b |
| 1.6e-49 | FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_c7193bd75c6bd2256826e031e57a23bd | p@chr6:128920492..128920498, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_c7193bd75c6bd2256826e031e57a23bd | p@chr6:128920492..128920498, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_c7193bd75c6bd2256826e031e57a23bd | p@chr11:118164535..118164544, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_c7193bd75c6bd2256826e031e57a23bd | p@chrX:160840025..160840037, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_c7193bd75c6bd2256826e031e57a23bd | p@chrX:160840025..160840037, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_bb9e03ce26dd7a016b3dcf06e2901e8b | p1@ENSMUST00000150529 |
| 2.33e-49 | FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_bb9e03ce26dd7a016b3dcf06e2901e8b | p1@ENSMUST00000150529 |
| 2.76e-49 | FFCP PHASE1:Hg19::chr5:54281586..54281597,-#_9e5ba80b0b317c18c8f7d76ba1622860 | p5@ESM1 |
| 2.76e-49 | FFCP PHASE2:Hg19::chr5:54281586..54281597,-#_9e5ba80b0b317c18c8f7d76ba1622860 | p5@ESM1 |
| 3.91e-49 | FFCP PHASE2:Hg19::chr11:102662218..102662229,-#_030bbcca6aacdc14661c2859ea5729ef | p@chr11:102662218..102662229, - |
| 3.91e-49 | FFCP PHASE1:Hg19::chr11:102662218..102662229,-#_030bbcca6aacdc14661c2859ea5729ef | p@chr11:102662218..102662229, - |
| 5.86e-49 | FFCP PHASE1:Hg19::chr7:33944150..33944169,+#_33c4f131df5276ccef9403bc1384f180 | p8@BMPER |
| 5.86e-49 | FFCP PHASE2:Hg19::chr7:33944150..33944169,+#_33c4f131df5276ccef9403bc1384f180 | p8@BMPER |
| 1.12e-48 | FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_b23e6b9423a4617518e95ff754c090f5 | p3@SULT1B1 |
| 1.12e-48 | FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_b23e6b9423a4617518e95ff754c090f5 | p3@SULT1B1 |
