FFCP PHASE1:Mm9::chr15:99125642..99125710,+: Difference between revisions
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|id=chr15:99125642..99125710,+ | |id=chr15:99125642..99125710,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.41e-12!23;CL:0000337!4.41e-12!23;CL:0000540!1.26e-10!33;CL:0000047!1.26e-10!33;CL:0000031!1.26e-10!33;CL:0000404!1.26e-10!33;CL:0000393!1.25e-07!39;CL:0000211!1.25e-07!39;CL:0002319!4.25e-07!43;CL:0000221!7.33e-07!44;CL:0000133!7.33e-07!44 | |ontology_enrichment_celltype=CL:0000117!4.41e-12!23;CL:0000337!4.41e-12!23;CL:0000540!1.26e-10!33;CL:0000047!1.26e-10!33;CL:0000031!1.26e-10!33;CL:0000404!1.26e-10!33;CL:0000393!1.25e-07!39;CL:0000211!1.25e-07!39;CL:0002319!4.25e-07!43;CL:0000221!7.33e-07!44;CL:0000133!7.33e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.36e-12,23;CL:0000337,4.36e-12,23;CL:0000540,1.25e-10,33;CL:0000047,1.25e-10,33;CL:0000031,1.25e-10,33;CL:0000404,1.25e-10,33;CL:0000393,1.24e-07,39;CL:0000211,1.24e-07,39;CL:0002319,4.23e-07,43;CL:0000221,7.29e-07,44;CL:0000133,7.29e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.85e-22!73;UBERON:0005743!7.85e-22!73;UBERON:0000073!1.64e-20!75;UBERON:0001016!1.64e-20!75;UBERON:0001049!2.76e-20!52;UBERON:0005068!2.76e-20!52;UBERON:0006241!2.76e-20!52;UBERON:0007135!2.76e-20!52;UBERON:0000033!4.08e-20!63;UBERON:0002346!9.50e-20!71;UBERON:0003075!9.50e-20!71;UBERON:0007284!9.50e-20!71;UBERON:0000955!7.42e-19!50;UBERON:0006238!7.42e-19!50;UBERON:0003056!2.19e-18!49;UBERON:0004121!3.51e-18!102;UBERON:0000924!3.51e-18!102;UBERON:0006601!3.51e-18!102;UBERON:0002616!3.69e-18!49;UBERON:0003080!7.81e-16!40;UBERON:0002020!3.32e-15!34;UBERON:0002780!3.43e-15!39;UBERON:0001890!3.43e-15!39;UBERON:0006240!3.43e-15!39;UBERON:0002791!2.11e-12!29;UBERON:0003528!2.11e-12!29;UBERON:0001893!2.11e-12!29;UBERON:0000468!2.32e-12!333;UBERON:0000153!5.66e-12!94;UBERON:0000025!7.63e-12!114;UBERON:0004111!2.11e-11!122;UBERON:0007811!1.33e-10!86;UBERON:0000922!1.95e-10!328;UBERON:0000956!5.85e-09!21;UBERON:0001869!5.85e-09!21;UBERON:0000203!5.85e-09!21;UBERON:0000479!2.66e-07!349;UBERON:0002619!3.01e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!7.85e-22!73;UBERON:0005743!7.85e-22!73;UBERON:0000073!1.64e-20!75;UBERON:0001016!1.64e-20!75;UBERON:0001049!2.76e-20!52;UBERON:0005068!2.76e-20!52;UBERON:0006241!2.76e-20!52;UBERON:0007135!2.76e-20!52;UBERON:0000033!4.08e-20!63;UBERON:0002346!9.50e-20!71;UBERON:0003075!9.50e-20!71;UBERON:0007284!9.50e-20!71;UBERON:0000955!7.42e-19!50;UBERON:0006238!7.42e-19!50;UBERON:0003056!2.19e-18!49;UBERON:0004121!3.51e-18!102;UBERON:0000924!3.51e-18!102;UBERON:0006601!3.51e-18!102;UBERON:0002616!3.69e-18!49;UBERON:0003080!7.81e-16!40;UBERON:0002020!3.32e-15!34;UBERON:0002780!3.43e-15!39;UBERON:0001890!3.43e-15!39;UBERON:0006240!3.43e-15!39;UBERON:0002791!2.11e-12!29;UBERON:0003528!2.11e-12!29;UBERON:0001893!2.11e-12!29;UBERON:0000468!2.32e-12!333;UBERON:0000153!5.66e-12!94;UBERON:0000025!7.63e-12!114;UBERON:0004111!2.11e-11!122;UBERON:0007811!1.33e-10!86;UBERON:0000922!1.95e-10!328;UBERON:0000956!5.85e-09!21;UBERON:0001869!5.85e-09!21;UBERON:0000203!5.85e-09!21;UBERON:0000479!2.66e-07!349;UBERON:0002619!3.01e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.07e-22,64;UBERON:0003075,2.07e-22,64;UBERON:0007284,2.07e-22,64;UBERON:0001017,7.69e-22,73;UBERON:0000073,3.87e-21,54;UBERON:0001016,1.61e-20,75;UBERON:0001049,2.71e-20,52;UBERON:0005068,2.71e-20,52;UBERON:0006241,2.71e-20,52;UBERON:0007135,2.71e-20,52;UBERON:0004121,6.92e-20,95;UBERON:0000924,6.92e-20,95;UBERON:0006601,6.92e-20,95;UBERON:0010314,3.08e-19,92;UBERON:0010371,6.51e-19,73;UBERON:0003056,2.15e-18,49;UBERON:0000955,1.32e-17,47;UBERON:0006238,1.32e-17,47;UBERON:0002616,6.40e-17,46;UBERON:0003080,7.70e-16,40;UBERON:0002020,3.28e-15,34;UBERON:0002780,3.38e-15,39;UBERON:0001890,3.38e-15,39;UBERON:0006240,3.38e-15,39;UBERON:0003528,2.08e-12,29;UBERON:0002791,2.08e-12,29;UBERON:0001893,2.08e-12,29;UBERON:0000025,7.55e-12,114;UBERON:0004111,2.09e-11,122;UBERON:0000956,5.81e-09,21;UBERON:0001869,5.81e-09,21;UBERON:0000203,5.81e-09,21;UBERON:0000922,3.10e-08,320;UBERON:0000479,2.41e-07,349;UBERON:0002619,2.99e-07,17 | |||
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| ||
|short_description=p1@Prpf40b | |short_description=p1@Prpf40b | ||
}} | }} |
Revision as of 12:47, 13 November 2012
Short description: | p1@Prpf40b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prpf40b_5end |
Coexpression cluster: | MCL_coexpression_mm9:797 |
Association with transcript: | 0bp_to_ENSMUST00000130575, ENSMUST00000138036, ENSMUST00000140806, ENSMUST00000145482, ENSMUST00000150641, uc007xpg.1_5end |
EntrezGene: | Prpf40b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.36e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.36e-12 | 23 |
neuron | 1.25e-10 | 33 |
neuronal stem cell | 1.25e-10 | 33 |
neuroblast | 1.25e-10 | 33 |
electrically signaling cell | 1.25e-10 | 33 |
electrically responsive cell | 1.24e-07 | 39 |
electrically active cell | 1.24e-07 | 39 |
neural cell | 4.23e-07 | 43 |
ectodermal cell | 7.29e-07 | 44 |
neurectodermal cell | 7.29e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.07e-22 | 64 |
neural plate | 2.07e-22 | 64 |
presumptive neural plate | 2.07e-22 | 64 |
central nervous system | 7.69e-22 | 73 |
regional part of nervous system | 3.87e-21 | 54 |
nervous system | 1.61e-20 | 75 |
neural tube | 2.71e-20 | 52 |
neural rod | 2.71e-20 | 52 |
future spinal cord | 2.71e-20 | 52 |
neural keel | 2.71e-20 | 52 |
ectoderm-derived structure | 6.92e-20 | 95 |
ectoderm | 6.92e-20 | 95 |
presumptive ectoderm | 6.92e-20 | 95 |
structure with developmental contribution from neural crest | 3.08e-19 | 92 |
ecto-epithelium | 6.51e-19 | 73 |
pre-chordal neural plate | 2.15e-18 | 49 |
brain | 1.32e-17 | 47 |
future brain | 1.32e-17 | 47 |
regional part of brain | 6.40e-17 | 46 |
anterior neural tube | 7.70e-16 | 40 |
gray matter | 3.28e-15 | 34 |
regional part of forebrain | 3.38e-15 | 39 |
forebrain | 3.38e-15 | 39 |
future forebrain | 3.38e-15 | 39 |
brain grey matter | 2.08e-12 | 29 |
regional part of telencephalon | 2.08e-12 | 29 |
telencephalon | 2.08e-12 | 29 |
tube | 7.55e-12 | 114 |
anatomical conduit | 2.09e-11 | 122 |
cerebral cortex | 5.81e-09 | 21 |
cerebral hemisphere | 5.81e-09 | 21 |
pallium | 5.81e-09 | 21 |
embryo | 3.10e-08 | 320 |
tissue | 2.41e-07 | 349 |
regional part of cerebral cortex | 2.99e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.