Personal tools

FFCP PHASE1:Mm9::chr10:13272961..13272972,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr10:13272961..13272972,-
|id=chr10:13272961..13272972,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002611,8.30e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.38e-11!34;UBERON:0000073!3.04e-11!75;UBERON:0001016!3.04e-11!75;UBERON:0001049!5.90e-11!52;UBERON:0005068!5.90e-11!52;UBERON:0006241!5.90e-11!52;UBERON:0007135!5.90e-11!52;UBERON:0001017!6.03e-11!73;UBERON:0005743!6.03e-11!73;UBERON:0000955!4.78e-09!50;UBERON:0006238!4.78e-09!50;UBERON:0002791!6.10e-09!29;UBERON:0003528!6.10e-09!29;UBERON:0001893!6.10e-09!29;UBERON:0002346!8.56e-09!71;UBERON:0003075!8.56e-09!71;UBERON:0007284!8.56e-09!71;UBERON:0000033!8.94e-09!63;UBERON:0002616!1.00e-08!49;UBERON:0004121!1.17e-08!102;UBERON:0000924!1.17e-08!102;UBERON:0006601!1.17e-08!102;UBERON:0003080!3.10e-08!40;UBERON:0004111!3.55e-08!122;UBERON:0003056!4.03e-08!49;UBERON:0002780!6.16e-08!39;UBERON:0001890!6.16e-08!39;UBERON:0006240!6.16e-08!39;UBERON:0000025!8.20e-08!114;UBERON:0002021!3.79e-07!10;UBERON:0000411!3.79e-07!10;UBERON:0001950!3.79e-07!10
|ontology_enrichment_uberon=UBERON:0002020!1.38e-11!34;UBERON:0000073!3.04e-11!75;UBERON:0001016!3.04e-11!75;UBERON:0001049!5.90e-11!52;UBERON:0005068!5.90e-11!52;UBERON:0006241!5.90e-11!52;UBERON:0007135!5.90e-11!52;UBERON:0001017!6.03e-11!73;UBERON:0005743!6.03e-11!73;UBERON:0000955!4.78e-09!50;UBERON:0006238!4.78e-09!50;UBERON:0002791!6.10e-09!29;UBERON:0003528!6.10e-09!29;UBERON:0001893!6.10e-09!29;UBERON:0002346!8.56e-09!71;UBERON:0003075!8.56e-09!71;UBERON:0007284!8.56e-09!71;UBERON:0000033!8.94e-09!63;UBERON:0002616!1.00e-08!49;UBERON:0004121!1.17e-08!102;UBERON:0000924!1.17e-08!102;UBERON:0006601!1.17e-08!102;UBERON:0003080!3.10e-08!40;UBERON:0004111!3.55e-08!122;UBERON:0003056!4.03e-08!49;UBERON:0002780!6.16e-08!39;UBERON:0001890!6.16e-08!39;UBERON:0006240!6.16e-08!39;UBERON:0000025!8.20e-08!114;UBERON:0002021!3.79e-07!10;UBERON:0000411!3.79e-07!10;UBERON:0001950!3.79e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.77e-15,10;UBERON:0000411,5.77e-15,10;UBERON:0001950,5.77e-15,10;UBERON:0002020,9.24e-15,34;UBERON:0002619,2.08e-13,17;UBERON:0000956,4.93e-13,21;UBERON:0001869,4.93e-13,21;UBERON:0000203,4.93e-13,21;UBERON:0000073,9.91e-13,54;UBERON:0001049,1.25e-11,52;UBERON:0005068,1.25e-11,52;UBERON:0006241,1.25e-11,52;UBERON:0007135,1.25e-11,52;UBERON:0003528,8.35e-11,29;UBERON:0002791,8.35e-11,29;UBERON:0001893,8.35e-11,29;UBERON:0001017,1.13e-09,73;UBERON:0001016,2.57e-09,75;UBERON:0002346,7.94e-09,64;UBERON:0003075,7.94e-09,64;UBERON:0007284,7.94e-09,64;UBERON:0002616,1.24e-08,46;UBERON:0000955,2.15e-08,47;UBERON:0006238,2.15e-08,47;UBERON:0002780,1.69e-07,39;UBERON:0001890,1.69e-07,39;UBERON:0006240,1.69e-07,39;UBERON:0010371,2.46e-07,73;UBERON:0003080,2.93e-07,40;UBERON:0002256,8.30e-07,2
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.218025156380447,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.405017814995072,0.210324961351382,1.42825492201902,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,1.40456071893706,0.307213066512487,0.923204014111357,0.823388792421687,0.52091337055676,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.996601765593721,0.745597783301202,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,1.46390398505774,1.04723353406728,0,0.359445373517761,0,0.127070227073065,0.599162557619291,0.915001205637253,0.502617408451458,1.21677024134594,0.767146371990992,0.62336413367868,0.324482526135515,0.81471491080253,0.248813941220186,0,0.420883711772948,0.390361328888111,0,0.360124259610698,0.150704817835715,0.340182495756639,0.384341160854549,0.187403449119458,0.776110112217047,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.771335564436891,0.930135779001631,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,0.729619285912702,0.730999937126662,0.439100230582101,0.671032093801859,1.05144974282064,1.13195073617213,0.330418782983798,0,0,0.928946687441754,0.38660238396628,0.201683524623343,0,0.760902504450237,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.210407459670956,0.442655759869801,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.575392274901621,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.586058432961016,0.327869890753351,0.504941854408746,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.651547837414304,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.42366414172764,1.7642271844397,0.32977250588296,0.322928853391811,0.361877549568935,0,0.328281799490123,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0,5.07323644815771,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.675824501963113,0.58678619322877,0.39061315453185,0.629156066554265,2.17425708743405,6.04863013141517,0,0,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.403304740547362,0,0,0,0.453460767230423,0,0,0.167884616364078,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0.564751842617067,3.22227665555024,2.86447756719698,1.03111909406213,2.05524755931193,3.7769694869485,0.675022500231806,2.70192721934532,0.906284817968409,1.55328093525546,0.103787347584177,1.19707462020309,0,0,0,0.367687016900028,1.11123363900808,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0.771626443924566,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,1.36069264241712,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0.125896817975577,0.101376931219515,0.367093504323363,0,0.218025156380447,0.219686182734472,0.777719596297134,0.279972843250725,0,0,0,0,0.257259436035947,0.573066879877513,0.515672092277442,0.606949382578793,1.05798195854407,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.207379224616955,0.405017814995072,0.210324961351382,1.42825492201902,1.10434270475807,0.122490799214954,0.0958454710182364,0,0,1.40456071893706,0.307213066512487,0.923204014111357,0.823388792421687,0.52091337055676,0.558365998002762,1.12552522006336,0.45839474333043,1.17851434189467,0.996601765593721,0.745597783301202,0.302904773332736,0.529000920747499,0,0,0,0,0.649776417447669,0,0.280888840263504,0,0.519572009205738,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0,0.506719730950197,0,0.22836775943812,0.258937883647172,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,1.46390398505774,1.04723353406728,0,0.359445373517761,0,0.127070227073065,0.599162557619291,0.915001205637253,0.502617408451458,1.21677024134594,0.767146371990992,0.62336413367868,0.324482526135515,0.81471491080253,0.248813941220186,0,0.420883711772948,0.390361328888111,0,0.360124259610698,0.150704817835715,0.340182495756639,0.384341160854549,0.187403449119458,0.776110112217047,0,0.378212160335639,0.351902248327898,0.219195732427575,0,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.771335564436891,0.930135779001631,0.536546802799238,0.700592054203017,0.822799249567402,0.820837320395476,0.729619285912702,0.730999937126662,0.439100230582101,0.671032093801859,1.05144974282064,1.13195073617213,0.330418782983798,0,0,0.928946687441754,0.38660238396628,0.201683524623343,0,0.760902504450237,0.474529061544512,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.387904974335251,0.210407459670956,0.442655759869801,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,0,0.575392274901621,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0.482443521363367,0.184753190166605,0.189491411770485,0.325929952884052,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.315270288212382,0.221464689648775,0.797273843287435,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.586058432961016,0.327869890753351,0.504941854408746,0.315508219416257,0,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.642642632843614,0.567760340833074,0.534196811001766,0.651547837414304,0.494910368917606,0,0.485561272309963,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0.177340233642274,0.713475270408282,0.329098041204242,0,0,0.42366414172764,1.7642271844397,0.32977250588296,0.322928853391811,0.361877549568935,0,0.328281799490123,0.582961673259701,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0,5.07323644815771,0.149516546043979,0.496375471371293,0.194451188344048,0.387479470433193,0.675824501963113,0.58678619322877,0.39061315453185,0.629156066554265,2.17425708743405,6.04863013141517,0,0,0.102710957164827,0,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.403304740547362,0,0,0,0.453460767230423,0,0,0.167884616364078,0.386379188064381,0,0.183151624267265,0.428736758158132,0,0.564751842617067,3.22227665555024,2.86447756719698,1.03111909406213,2.05524755931193,3.7769694869485,0.675022500231806,2.70192721934532,0.906284817968409,1.55328093525546,0.103787347584177,1.19707462020309,0,0,0,0.367687016900028,1.11123363900808,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.565879024158229,0.655490552289177,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.197008964751127,0.409231043169689,0.464810523557898,0.771626443924566,0,0.233931608445408,0.429742108096597,0,0.220591419119515,0.927471342481686
|short_description=p6@Pex3
|short_description=p6@Pex3
}}
}}

Revision as of 14:31, 13 November 2012

Short description:p6@Pex3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Pex3_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -13bp_to_ENSMUST00000170376, NM_001164195, NM_019961, uc007ekx.2, uc007eky.2_5end
EntrezGene:Pex3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Pex3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the dorsal spinal cord8.30e-072

Uber anatomy
Ontology termp-valuen
occipital lobe5.77e-1510
visual cortex5.77e-1510
neocortex5.77e-1510
gray matter9.24e-1534
regional part of cerebral cortex2.08e-1317
cerebral cortex4.93e-1321
cerebral hemisphere4.93e-1321
pallium4.93e-1321
regional part of nervous system9.91e-1354
neural tube1.25e-1152
neural rod1.25e-1152
future spinal cord1.25e-1152
neural keel1.25e-1152
brain grey matter8.35e-1129
regional part of telencephalon8.35e-1129
telencephalon8.35e-1129
central nervous system1.13e-0973
nervous system2.57e-0975
neurectoderm7.94e-0964
neural plate7.94e-0964
presumptive neural plate7.94e-0964
regional part of brain1.24e-0846
brain2.15e-0847
future brain2.15e-0847
regional part of forebrain1.69e-0739
forebrain1.69e-0739
future forebrain1.69e-0739
ecto-epithelium2.46e-0773
anterior neural tube2.93e-0740
dorsal horn of spinal cord8.30e-072







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:13272961..13272972,-&oldid=2259839"