FFCP PHASE1:Mm9::chr12:8018881..8018891,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr12:8018881..8018891,+ | |id=chr12:8018881..8018891,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.12e-15!22;UBERON:0007499!1.12e-15!22;UBERON:0006925!1.12e-15!22;UBERON:0009497!1.12e-15!22;UBERON:0000015!1.12e-15!22;UBERON:0002423!1.12e-15!22;UBERON:0006235!1.12e-15!22;UBERON:0008835!1.12e-15!22;UBERON:0003894!1.12e-15!22;UBERON:0004161!1.12e-15!22;UBERON:0008836!1.12e-15!22;UBERON:0004119!2.34e-15!130;UBERON:0000925!2.34e-15!130;UBERON:0006595!2.34e-15!130;UBERON:0001007!8.50e-15!128;UBERON:0001555!8.50e-15!128;UBERON:0007026!8.50e-15!128;UBERON:0009854!8.74e-15!23;UBERON:0009856!8.74e-15!23;UBERON:0002365!3.22e-13!25;UBERON:0002330!3.22e-13!25;UBERON:0004921!4.08e-13!126;UBERON:0004185!4.08e-13!126;UBERON:0000160!1.39e-12!43;UBERON:0005409!7.89e-12!59;UBERON:0000344!7.84e-08!15 | |ontology_enrichment_uberon=UBERON:0002107!1.12e-15!22;UBERON:0007499!1.12e-15!22;UBERON:0006925!1.12e-15!22;UBERON:0009497!1.12e-15!22;UBERON:0000015!1.12e-15!22;UBERON:0002423!1.12e-15!22;UBERON:0006235!1.12e-15!22;UBERON:0008835!1.12e-15!22;UBERON:0003894!1.12e-15!22;UBERON:0004161!1.12e-15!22;UBERON:0008836!1.12e-15!22;UBERON:0004119!2.34e-15!130;UBERON:0000925!2.34e-15!130;UBERON:0006595!2.34e-15!130;UBERON:0001007!8.50e-15!128;UBERON:0001555!8.50e-15!128;UBERON:0007026!8.50e-15!128;UBERON:0009854!8.74e-15!23;UBERON:0009856!8.74e-15!23;UBERON:0002365!3.22e-13!25;UBERON:0002330!3.22e-13!25;UBERON:0004921!4.08e-13!126;UBERON:0004185!4.08e-13!126;UBERON:0000160!1.39e-12!43;UBERON:0005409!7.89e-12!59;UBERON:0000344!7.84e-08!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.92e-22,22;UBERON:0007499,7.92e-22,22;UBERON:0006925,7.92e-22,22;UBERON:0009497,7.92e-22,22;UBERON:0000015,7.92e-22,22;UBERON:0002423,7.92e-22,22;UBERON:0006235,7.92e-22,22;UBERON:0008835,7.92e-22,22;UBERON:0003894,7.92e-22,22;UBERON:0004161,7.92e-22,22;UBERON:0008836,7.92e-22,22;UBERON:0009854,9.17e-21,23;UBERON:0009856,9.17e-21,23;UBERON:0002365,6.82e-19,25;UBERON:0002330,6.82e-19,25;UBERON:0001007,5.59e-15,116;UBERON:0001555,5.59e-15,116;UBERON:0007026,5.59e-15,116;UBERON:0004119,1.22e-14,118;UBERON:0000925,1.22e-14,118;UBERON:0006595,1.22e-14,118;UBERON:0004921,1.63e-12,114;UBERON:0000160,4.82e-12,31;UBERON:0005256,2.46e-09,45;UBERON:0003914,7.91e-09,47;UBERON:0005172,2.31e-08,49;UBERON:0005173,2.31e-08,49;UBERON:0002417,2.31e-08,49;UBERON:0000916,2.31e-08,49;UBERON:0001962,1.95e-07,2;UBERON:0001961,1.95e-07,2;UBERON:0001744,1.95e-07,2;UBERON:0003929,3.57e-07,55;UBERON:0005409,3.61e-07,47 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,4.12936705920906,0,0.430761996159075,0.430942465371778,1.14014051673824,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,10.7940638327563,8.4470934268197,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0,0,0,0.22237804384487,0.570676878337677,2.37264530772256,1.64698954724011,2.01068167040216,2.78539060857611,1.9496408711912,4.49409704327111,3.45820879799511,2.38969527905241,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0.449724224769707,0,0,0,0.863088412352432,1.94562272130042,3.29473695825698,77.6348315247715,1.48856379067401,4.99260276983297,2.02063102357689,3.22915344339442,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0.38581844092741,1.64834360321323,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07990149631429,4.12936705920906,0,0.430761996159075,0.430942465371778,1.14014051673824,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,0.679971333707751,10.7940638327563,8.4470934268197,2.24013443548668,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,4.44950941921873,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,2.64335026387038,1.05780226665418,0,0,0,0,0.22237804384487,0.570676878337677,2.37264530772256,1.64698954724011,2.01068167040216,2.78539060857611,1.9496408711912,4.49409704327111,3.45820879799511,2.38969527905241,0,0,0,0,0,0,0,0,0,0,1.77871576252289,0,0,0.449724224769707,0,0,0,0.863088412352432,1.94562272130042,3.29473695825698,77.6348315247715,1.48856379067401,4.99260276983297,2.02063102357689,3.22915344339442,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.847328283455281,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0.38581844092741,1.64834360321323,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Apob | |short_description=p3@Apob | ||
}} | }} |
Revision as of 22:49, 13 November 2012
Short description: | p3@Apob |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Apob_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | -273bp_to_ENSMUST00000171239_5end |
EntrezGene: | Apob |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 7.92e-22 | 22 |
epithelial sac | 7.92e-22 | 22 |
digestive gland | 7.92e-22 | 22 |
epithelium of foregut-midgut junction | 7.92e-22 | 22 |
anatomical boundary | 7.92e-22 | 22 |
hepatobiliary system | 7.92e-22 | 22 |
foregut-midgut junction | 7.92e-22 | 22 |
hepatic diverticulum | 7.92e-22 | 22 |
liver primordium | 7.92e-22 | 22 |
septum transversum | 7.92e-22 | 22 |
liver bud | 7.92e-22 | 22 |
digestive tract diverticulum | 9.17e-21 | 23 |
sac | 9.17e-21 | 23 |
exocrine gland | 6.82e-19 | 25 |
exocrine system | 6.82e-19 | 25 |
digestive system | 5.59e-15 | 116 |
digestive tract | 5.59e-15 | 116 |
primitive gut | 5.59e-15 | 116 |
endoderm-derived structure | 1.22e-14 | 118 |
endoderm | 1.22e-14 | 118 |
presumptive endoderm | 1.22e-14 | 118 |
subdivision of digestive tract | 1.63e-12 | 114 |
intestine | 4.82e-12 | 31 |
trunk mesenchyme | 2.46e-09 | 45 |
epithelial tube | 7.91e-09 | 47 |
abdomen element | 2.31e-08 | 49 |
abdominal segment element | 2.31e-08 | 49 |
abdominal segment of trunk | 2.31e-08 | 49 |
abdomen | 2.31e-08 | 49 |
gut-associated lymphoid tissue | 1.95e-07 | 2 |
mucosa-associated lymphoid tissue | 1.95e-07 | 2 |
lymphoid tissue | 1.95e-07 | 2 |
gut epithelium | 3.57e-07 | 55 |
gastrointestinal system | 3.61e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.