FFCP PHASE1:Mm9::chr1:187278654..187278679,+: Difference between revisions
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|id=chr1:187278654..187278679,+ | |id=chr1:187278654..187278679,+ | ||
|ontology_enrichment_celltype=CL:0000117!9.21e-12!23;CL:0000337!9.21e-12!23;CL:0000540!2.34e-07!33;CL:0000047!2.34e-07!33;CL:0000031!2.34e-07!33;CL:0000404!2.34e-07!33 | |ontology_enrichment_celltype=CL:0000117!9.21e-12!23;CL:0000337!9.21e-12!23;CL:0000540!2.34e-07!33;CL:0000047!2.34e-07!33;CL:0000031!2.34e-07!33;CL:0000404!2.34e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.36e-12,23;CL:0000337,5.36e-12,23;CL:0000540,4.67e-08,33;CL:0000047,4.67e-08,33;CL:0000031,4.67e-08,33;CL:0000404,4.67e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.19e-13!49;UBERON:0002020!1.29e-12!34;UBERON:0001049!1.53e-12!52;UBERON:0005068!1.53e-12!52;UBERON:0006241!1.53e-12!52;UBERON:0007135!1.53e-12!52;UBERON:0002346!1.53e-12!71;UBERON:0003075!1.53e-12!71;UBERON:0007284!1.53e-12!71;UBERON:0000033!1.79e-12!63;UBERON:0000955!3.99e-11!50;UBERON:0006238!3.99e-11!50;UBERON:0001017!6.87e-11!73;UBERON:0005743!6.87e-11!73;UBERON:0002616!8.40e-11!49;UBERON:0003080!9.48e-11!40;UBERON:0002780!3.60e-10!39;UBERON:0001890!3.60e-10!39;UBERON:0006240!3.60e-10!39;UBERON:0000073!4.50e-10!75;UBERON:0001016!4.50e-10!75;UBERON:0002791!8.40e-10!29;UBERON:0003528!8.40e-10!29;UBERON:0001893!8.40e-10!29;UBERON:0004121!8.07e-08!102;UBERON:0000924!8.07e-08!102;UBERON:0006601!8.07e-08!102 | |ontology_enrichment_uberon=UBERON:0003056!4.19e-13!49;UBERON:0002020!1.29e-12!34;UBERON:0001049!1.53e-12!52;UBERON:0005068!1.53e-12!52;UBERON:0006241!1.53e-12!52;UBERON:0007135!1.53e-12!52;UBERON:0002346!1.53e-12!71;UBERON:0003075!1.53e-12!71;UBERON:0007284!1.53e-12!71;UBERON:0000033!1.79e-12!63;UBERON:0000955!3.99e-11!50;UBERON:0006238!3.99e-11!50;UBERON:0001017!6.87e-11!73;UBERON:0005743!6.87e-11!73;UBERON:0002616!8.40e-11!49;UBERON:0003080!9.48e-11!40;UBERON:0002780!3.60e-10!39;UBERON:0001890!3.60e-10!39;UBERON:0006240!3.60e-10!39;UBERON:0000073!4.50e-10!75;UBERON:0001016!4.50e-10!75;UBERON:0002791!8.40e-10!29;UBERON:0003528!8.40e-10!29;UBERON:0001893!8.40e-10!29;UBERON:0004121!8.07e-08!102;UBERON:0000924!8.07e-08!102;UBERON:0006601!8.07e-08!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.49e-13,34;UBERON:0000073,2.79e-11,54;UBERON:0002346,3.72e-10,64;UBERON:0003075,3.72e-10,64;UBERON:0007284,3.72e-10,64;UBERON:0001049,3.96e-10,52;UBERON:0005068,3.96e-10,52;UBERON:0006241,3.96e-10,52;UBERON:0007135,3.96e-10,52;UBERON:0003056,7.50e-09,49;UBERON:0003528,9.06e-09,29;UBERON:0002791,9.06e-09,29;UBERON:0001893,9.06e-09,29;UBERON:0010371,9.88e-09,73;UBERON:0001017,1.45e-08,73;UBERON:0001016,4.05e-08,75;UBERON:0003080,5.42e-08,40;UBERON:0002780,2.88e-07,39;UBERON:0001890,2.88e-07,39;UBERON:0006240,2.88e-07,39;UBERON:0002616,4.15e-07,46;UBERON:0004121,4.57e-07,95;UBERON:0000924,4.57e-07,95;UBERON:0006601,4.57e-07,95;UBERON:0000955,7.68e-07,47;UBERON:0006238,7.68e-07,47 | |||
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| ||
|short_description=p4@Slc30a10 | |short_description=p4@Slc30a10 | ||
}} | }} |
Revision as of 05:51, 14 November 2012
Short description: | p4@Slc30a10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc30a10_5end |
Coexpression cluster: | MCL_coexpression_mm9:164 |
Association with transcript: | -47bp_to_ENSMUST00000061093, NM_001033286, uc007dzk.1, uc007dzl.1_5end |
EntrezGene: | Slc30a10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.36e-12 | 23 |
neuroblast (sensu Vertebrata) | 5.36e-12 | 23 |
neuron | 4.67e-08 | 33 |
neuronal stem cell | 4.67e-08 | 33 |
neuroblast | 4.67e-08 | 33 |
electrically signaling cell | 4.67e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.49e-13 | 34 |
regional part of nervous system | 2.79e-11 | 54 |
neurectoderm | 3.72e-10 | 64 |
neural plate | 3.72e-10 | 64 |
presumptive neural plate | 3.72e-10 | 64 |
neural tube | 3.96e-10 | 52 |
neural rod | 3.96e-10 | 52 |
future spinal cord | 3.96e-10 | 52 |
neural keel | 3.96e-10 | 52 |
pre-chordal neural plate | 7.50e-09 | 49 |
brain grey matter | 9.06e-09 | 29 |
regional part of telencephalon | 9.06e-09 | 29 |
telencephalon | 9.06e-09 | 29 |
ecto-epithelium | 9.88e-09 | 73 |
central nervous system | 1.45e-08 | 73 |
nervous system | 4.05e-08 | 75 |
anterior neural tube | 5.42e-08 | 40 |
regional part of forebrain | 2.88e-07 | 39 |
forebrain | 2.88e-07 | 39 |
future forebrain | 2.88e-07 | 39 |
regional part of brain | 4.15e-07 | 46 |
ectoderm-derived structure | 4.57e-07 | 95 |
ectoderm | 4.57e-07 | 95 |
presumptive ectoderm | 4.57e-07 | 95 |
brain | 7.68e-07 | 47 |
future brain | 7.68e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.