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FFCP PHASE1:Mm9::chr8:70342117..70342168,-: Difference between revisions

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|id=chr8:70342117..70342168,-
|id=chr8:70342117..70342168,-
|ontology_enrichment_celltype=CL:0000117!9.93e-09!23;CL:0000337!9.93e-09!23
|ontology_enrichment_celltype=CL:0000117!9.93e-09!23;CL:0000337!9.93e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.87e-10,23;CL:0000337,4.87e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.86e-18!63;UBERON:0001049!4.79e-18!52;UBERON:0005068!4.79e-18!52;UBERON:0006241!4.79e-18!52;UBERON:0007135!4.79e-18!52;UBERON:0002346!9.66e-18!71;UBERON:0003075!9.66e-18!71;UBERON:0007284!9.66e-18!71;UBERON:0000955!3.91e-17!50;UBERON:0006238!3.91e-17!50;UBERON:0002616!1.81e-16!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0002020!2.02e-15!34;UBERON:0000073!3.44e-15!75;UBERON:0001016!3.44e-15!75;UBERON:0003056!6.29e-15!49;UBERON:0004121!2.36e-13!102;UBERON:0000924!2.36e-13!102;UBERON:0006601!2.36e-13!102;UBERON:0003080!2.40e-13!40;UBERON:0002780!9.61e-13!39;UBERON:0001890!9.61e-13!39;UBERON:0006240!9.61e-13!39;UBERON:0002791!1.22e-12!29;UBERON:0003528!1.22e-12!29;UBERON:0001893!1.22e-12!29;UBERON:0007811!6.37e-10!86;UBERON:0002619!1.76e-09!17;UBERON:0000153!1.81e-09!94;UBERON:0000956!8.98e-09!21;UBERON:0001869!8.98e-09!21;UBERON:0000203!8.98e-09!21;UBERON:0002021!1.18e-08!10;UBERON:0000411!1.18e-08!10;UBERON:0001950!1.18e-08!10
|ontology_enrichment_uberon=UBERON:0000033!3.86e-18!63;UBERON:0001049!4.79e-18!52;UBERON:0005068!4.79e-18!52;UBERON:0006241!4.79e-18!52;UBERON:0007135!4.79e-18!52;UBERON:0002346!9.66e-18!71;UBERON:0003075!9.66e-18!71;UBERON:0007284!9.66e-18!71;UBERON:0000955!3.91e-17!50;UBERON:0006238!3.91e-17!50;UBERON:0002616!1.81e-16!49;UBERON:0001017!1.32e-15!73;UBERON:0005743!1.32e-15!73;UBERON:0002020!2.02e-15!34;UBERON:0000073!3.44e-15!75;UBERON:0001016!3.44e-15!75;UBERON:0003056!6.29e-15!49;UBERON:0004121!2.36e-13!102;UBERON:0000924!2.36e-13!102;UBERON:0006601!2.36e-13!102;UBERON:0003080!2.40e-13!40;UBERON:0002780!9.61e-13!39;UBERON:0001890!9.61e-13!39;UBERON:0006240!9.61e-13!39;UBERON:0002791!1.22e-12!29;UBERON:0003528!1.22e-12!29;UBERON:0001893!1.22e-12!29;UBERON:0007811!6.37e-10!86;UBERON:0002619!1.76e-09!17;UBERON:0000153!1.81e-09!94;UBERON:0000956!8.98e-09!21;UBERON:0001869!8.98e-09!21;UBERON:0000203!8.98e-09!21;UBERON:0002021!1.18e-08!10;UBERON:0000411!1.18e-08!10;UBERON:0001950!1.18e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.71e-21,54;UBERON:0001049,8.81e-20,52;UBERON:0005068,8.81e-20,52;UBERON:0006241,8.81e-20,52;UBERON:0007135,8.81e-20,52;UBERON:0002346,3.87e-18,64;UBERON:0003075,3.87e-18,64;UBERON:0007284,3.87e-18,64;UBERON:0002020,5.17e-18,34;UBERON:0001017,8.70e-18,73;UBERON:0001016,7.26e-17,75;UBERON:0000955,3.78e-16,47;UBERON:0006238,3.78e-16,47;UBERON:0002616,2.60e-15,46;UBERON:0003528,3.39e-14,29;UBERON:0002791,3.39e-14,29;UBERON:0001893,3.39e-14,29;UBERON:0010371,5.31e-14,73;UBERON:0003056,1.57e-13,49;UBERON:0004121,1.88e-13,95;UBERON:0000924,1.88e-13,95;UBERON:0006601,1.88e-13,95;UBERON:0003080,1.96e-13,40;UBERON:0002780,1.16e-12,39;UBERON:0001890,1.16e-12,39;UBERON:0006240,1.16e-12,39;UBERON:0002021,1.13e-11,10;UBERON:0000411,1.13e-11,10;UBERON:0001950,1.13e-11,10;UBERON:0002619,2.06e-10,17;UBERON:0010314,3.39e-09,92;UBERON:0000956,6.05e-09,21;UBERON:0001869,6.05e-09,21;UBERON:0000203,6.05e-09,21;UBERON:0003076,2.65e-07,12;UBERON:0003057,2.65e-07,12;UBERON:0002420,8.32e-07,8;UBERON:0007245,8.32e-07,8;UBERON:0010009,8.32e-07,8;UBERON:0010011,8.32e-07,8;UBERON:0000454,8.32e-07,8
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,5.27160042341476,2.20256102594018,0,0.218025156380447,0.439372365468944,0.388859798148567,1.53985063787899,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,5.07065122804943,1.0165335962074,1.77858959222228,0,0,0,0,0,0.622137673850866,0.270011876663381,0,5.99867067247988,8.61387309711293,2.9397791811589,1.24599112323707,0.919218786610021,41.8440347797677,55.9270540813122,50.3829429080479,3.03338461779446,2.92760459527711,2.6045668527838,17.3093459380856,54.587973173073,53.937781465214,32.9984015730508,37.4437520501641,12.4887628702951,0.075726193333184,0.226714680320357,0,0,0,0,0,0,5.61777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,6.96521666286266,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,1.59059292611903,0,0,0,0,0,142.877028941635,191.434290027498,0,0,0,0,58.7179306466905,196.725259212009,20.2303506901712,322.96558691725,300.209946905808,71.6868753730482,121.356464774683,1.83310854930569,0,0,2.73574412652416,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,2.17716797284249,2.43416068541215,2.15513966487376,7.50239775143145,0.215567992932842,0.756424320671277,0.527853372491847,0,1.39023624612799,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,1.44988040774851,0.469052119962192,0.36012412292203,1.18372367792605,0.393528463494808,0.617068451549513,0.697601834251224,0.268273401399619,0.583826711835847,0.493679549740441,0.164167464079095,0.0810688095458557,0,0.439100230582101,0.402619256281115,303.027815880907,24.0796792967526,0,0.528901133327089,0.639864751605702,0.464473343720877,0.77320476793256,1.21010114774006,0.667134131534611,0.190225626112559,0.474529061544512,0.658795818896044,0.754005626400808,0.795825888164603,2.33956904542944,0,0.432276099749388,0,0,0,0,0,0,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0.678980343100753,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,33.3945227174607,31.9987904396715,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0,0,0,0,0,0,210.144140939862,0.141940085208269,0.534196811001766,2.11753047159649,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,1.03371317267288,1.09060118843252,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.886701168211368,1.42695054081656,3.78462747384878,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0,0,0.874442509889552,35.2308073819968,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,1.26534397432454,1.01659733563424,0.972048067396211,1.46361807210128,1.09181281873089,1.34864346384821,1.1571483801547,0.26175594198403,0.518459893167171,0,0,0.598066184175915,0,0.194451188344048,0.516639293910924,0.168956125490778,0.704143431874524,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,0.194915761479505,0.577271049841977,0.467507608726276,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,0,0,341.674864783325,318.084738426459,325.404651633577,234.579593899134,311.027463975872,312.733073519336,321.31071011034,362.958889798722,407.3750256768,323.082434533136,0.415149390336707,0.798049746802062,1.19513524027894,1.45864030240976,3.77303692730368,2.75765262675021,3.11145418922261,2.06035057238894,5.13470735346904,3.28506375292937,5.57654459758527,4.14977951049368,3.09016974650612,3.9695594491019,3.61843454420364,3.81034953026459,3.36064545240081,3.8581844092741,2.06042950401653,4.71036544430071,5.48590803816665,3.19456451086807,3.33810665926249,3.19762116591123,3.48204707536723,2.5384382367503,2.37806364734604,4.20911538300549,2.98769050460896,3.92799590160417,3.32178050747688,2.36410757701352,4.50154147486658,3.09873682371932,1.73615949883027,2.49810577937946,3.74290573512653,2.79332370262788,1.14772999241306,0.882365676478062,1.15933917810211
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2694805679814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1761186246079,5.27160042341476,2.20256102594018,0,0.218025156380447,0.439372365468944,0.388859798148567,1.53985063787899,0,0,0,0,0,0,0,2.42779753031517,3.1739458756322,5.07065122804943,1.0165335962074,1.77858959222228,0,0,0,0,0,0.622137673850866,0.270011876663381,0,5.99867067247988,8.61387309711293,2.9397791811589,1.24599112323707,0.919218786610021,41.8440347797677,55.9270540813122,50.3829429080479,3.03338461779446,2.92760459527711,2.6045668527838,17.3093459380856,54.587973173073,53.937781465214,32.9984015730508,37.4437520501641,12.4887628702951,0.075726193333184,0.226714680320357,0,0,0,0,0,0,5.61777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,6.96521666286266,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0.23517741427141,0.125666591329675,0.247194967734374,1.59059292611903,0,0,0,0,0,142.877028941635,191.434290027498,0,0,0,0,58.7179306466905,196.725259212009,20.2303506901712,322.96558691725,300.209946905808,71.6868753730482,121.356464774683,1.83310854930569,0,0,2.73574412652416,0.260240885925407,0.689706313300419,0.720248519221397,0.452114453507145,2.17716797284249,2.43416068541215,2.15513966487376,7.50239775143145,0.215567992932842,0.756424320671277,0.527853372491847,0,1.39023624612799,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,1.44988040774851,0.469052119962192,0.36012412292203,1.18372367792605,0.393528463494808,0.617068451549513,0.697601834251224,0.268273401399619,0.583826711835847,0.493679549740441,0.164167464079095,0.0810688095458557,0,0.439100230582101,0.402619256281115,303.027815880907,24.0796792967526,0,0.528901133327089,0.639864751605702,0.464473343720877,0.77320476793256,1.21010114774006,0.667134131534611,0.190225626112559,0.474529061544512,0.658795818896044,0.754005626400808,0.795825888164603,2.33956904542944,0,0.432276099749388,0,0,0,0,0,0,0.210407459670956,0.126473074248515,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.488894929326078,0.678980343100753,0,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,33.3945227174607,31.9987904396715,0,0,0.631016438832513,0.780877488593277,0.215423397732799,0,0,0,0,0,0,210.144140939862,0.141940085208269,0.534196811001766,2.11753047159649,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0.307435147943927,1.03371317267288,1.09060118843252,0.712994756769443,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.886701168211368,1.42695054081656,3.78462747384878,0.304464949114599,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0,0,0,0.874442509889552,35.2308073819968,0,0.82554747185289,0.370389054739423,0,0,0,0,0,0,0,1.26534397432454,1.01659733563424,0.972048067396211,1.46361807210128,1.09181281873089,1.34864346384821,1.1571483801547,0.26175594198403,0.518459893167171,0,0,0.598066184175915,0,0.194451188344048,0.516639293910924,0.168956125490778,0.704143431874524,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.295379054349154,0.504832249740738,0.381034033274999,0.201652370273681,0.194915761479505,0.577271049841977,0.467507608726276,0.226730383615211,0,0,0,0.579568782096571,0.563047426353546,0.36630324853453,0,0,341.674864783325,318.084738426459,325.404651633577,234.579593899134,311.027463975872,312.733073519336,321.31071011034,362.958889798722,407.3750256768,323.082434533136,0.415149390336707,0.798049746802062,1.19513524027894,1.45864030240976,3.77303692730368,2.75765262675021,3.11145418922261,2.06035057238894,5.13470735346904,3.28506375292937,5.57654459758527,4.14977951049368,3.09016974650612,3.9695594491019,3.61843454420364,3.81034953026459,3.36064545240081,3.8581844092741,2.06042950401653,4.71036544430071,5.48590803816665,3.19456451086807,3.33810665926249,3.19762116591123,3.48204707536723,2.5384382367503,2.37806364734604,4.20911538300549,2.98769050460896,3.92799590160417,3.32178050747688,2.36410757701352,4.50154147486658,3.09873682371932,1.73615949883027,2.49810577937946,3.74290573512653,2.79332370262788,1.14772999241306,0.882365676478062,1.15933917810211
|short_description=p1@Psd3
|short_description=p1@Psd3
}}
}}

Revision as of 06:24, 14 November 2012

Short description:p1@Psd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Psd3_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000059374_5end
EntrezGene:Psd3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Psd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D341.84
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F355.93
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D750.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E554.59
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I653.94
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.44
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2142.88
cerebellum, neonate N30.CNhs11135.1395-42I2191.43
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A458.72
corpus striatum, adult.CNhs10487.19-21D8196.73
corpus striatum, neonate N00.CNhs11226.630-43F120.23
cortex, adult.CNhs10473.12-14D5322.97
cortex, neonate N30.CNhs11107.1392-42F2300.21
diencephalon, adult.CNhs10482.20-12F271.69
diencephalon, neonate N30.CNhs11201.1388-42B2121.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A27.50
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E8303.03
hippocampus, neonate N00.CNhs11228.627-43G124.08
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C233.39
medulla oblongata, neonate N30.CNhs11200.1396-42A332.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9210.14
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C935.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1341.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2318.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3325.40
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7234.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4311.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5312.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6321.31
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7362.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8407.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9323.08
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.87e-1023
neuroblast (sensu Vertebrata)4.87e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.71e-2154
neural tube8.81e-2052
neural rod8.81e-2052
future spinal cord8.81e-2052
neural keel8.81e-2052
neurectoderm3.87e-1864
neural plate3.87e-1864
presumptive neural plate3.87e-1864
gray matter5.17e-1834
central nervous system8.70e-1873
nervous system7.26e-1775
brain3.78e-1647
future brain3.78e-1647
regional part of brain2.60e-1546
brain grey matter3.39e-1429
regional part of telencephalon3.39e-1429
telencephalon3.39e-1429
ecto-epithelium5.31e-1473
pre-chordal neural plate1.57e-1349
ectoderm-derived structure1.88e-1395
ectoderm1.88e-1395
presumptive ectoderm1.88e-1395
anterior neural tube1.96e-1340
regional part of forebrain1.16e-1239
forebrain1.16e-1239
future forebrain1.16e-1239
occipital lobe1.13e-1110
visual cortex1.13e-1110
neocortex1.13e-1110
regional part of cerebral cortex2.06e-1017
structure with developmental contribution from neural crest3.39e-0992
cerebral cortex6.05e-0921
cerebral hemisphere6.05e-0921
pallium6.05e-0921
posterior neural tube2.65e-0712
chordal neural plate2.65e-0712
basal ganglion8.32e-078
nuclear complex of neuraxis8.32e-078
aggregate regional part of brain8.32e-078
collection of basal ganglia8.32e-078
cerebral subcortex8.32e-078







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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