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FFCP PHASE1:Mm9::chr7:116154364..116154444,+: Difference between revisions

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|id=chr7:116154364..116154444,+
|id=chr7:116154364..116154444,+
|ontology_enrichment_celltype=CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000540!1.31e-13!33;CL:0000047!1.31e-13!33;CL:0000031!1.31e-13!33;CL:0000404!1.31e-13!33;CL:0000221!2.10e-10!44;CL:0000133!2.10e-10!44;CL:0002319!2.43e-10!43;CL:0000393!3.54e-09!39;CL:0000211!3.54e-09!39;CL:0000055!9.89e-07!50
|ontology_enrichment_celltype=CL:0000117!2.83e-14!23;CL:0000337!2.83e-14!23;CL:0000540!1.31e-13!33;CL:0000047!1.31e-13!33;CL:0000031!1.31e-13!33;CL:0000404!1.31e-13!33;CL:0000221!2.10e-10!44;CL:0000133!2.10e-10!44;CL:0002319!2.43e-10!43;CL:0000393!3.54e-09!39;CL:0000211!3.54e-09!39;CL:0000055!9.89e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.25e-16,23;CL:0000337,2.25e-16,23;CL:0000540,1.20e-14,33;CL:0000047,1.20e-14,33;CL:0000031,1.20e-14,33;CL:0000404,1.20e-14,33;CL:0000221,1.44e-10,44;CL:0000133,1.44e-10,44;CL:0002319,1.75e-10,43;CL:0000393,2.49e-10,39;CL:0000211,2.49e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.55e-29!71;UBERON:0003075!2.55e-29!71;UBERON:0007284!2.55e-29!71;UBERON:0004121!2.89e-28!102;UBERON:0000924!2.89e-28!102;UBERON:0006601!2.89e-28!102;UBERON:0001017!9.64e-28!73;UBERON:0005743!9.64e-28!73;UBERON:0000073!1.89e-26!75;UBERON:0001016!1.89e-26!75;UBERON:0001049!1.60e-23!52;UBERON:0005068!1.60e-23!52;UBERON:0006241!1.60e-23!52;UBERON:0007135!1.60e-23!52;UBERON:0000033!4.21e-23!63;UBERON:0000955!2.62e-22!50;UBERON:0006238!2.62e-22!50;UBERON:0003056!5.36e-22!49;UBERON:0002616!8.55e-22!49;UBERON:0002020!1.19e-19!34;UBERON:0003080!1.88e-19!40;UBERON:0002780!8.20e-19!39;UBERON:0001890!8.20e-19!39;UBERON:0006240!8.20e-19!39;UBERON:0002791!9.79e-17!29;UBERON:0003528!9.79e-17!29;UBERON:0001893!9.79e-17!29;UBERON:0000956!7.86e-12!21;UBERON:0001869!7.86e-12!21;UBERON:0000203!7.86e-12!21;UBERON:0000153!2.39e-10!94;UBERON:0007811!9.35e-10!86;UBERON:0002619!1.30e-09!17;UBERON:0000468!2.06e-08!333;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10
|ontology_enrichment_uberon=UBERON:0002346!2.55e-29!71;UBERON:0003075!2.55e-29!71;UBERON:0007284!2.55e-29!71;UBERON:0004121!2.89e-28!102;UBERON:0000924!2.89e-28!102;UBERON:0006601!2.89e-28!102;UBERON:0001017!9.64e-28!73;UBERON:0005743!9.64e-28!73;UBERON:0000073!1.89e-26!75;UBERON:0001016!1.89e-26!75;UBERON:0001049!1.60e-23!52;UBERON:0005068!1.60e-23!52;UBERON:0006241!1.60e-23!52;UBERON:0007135!1.60e-23!52;UBERON:0000033!4.21e-23!63;UBERON:0000955!2.62e-22!50;UBERON:0006238!2.62e-22!50;UBERON:0003056!5.36e-22!49;UBERON:0002616!8.55e-22!49;UBERON:0002020!1.19e-19!34;UBERON:0003080!1.88e-19!40;UBERON:0002780!8.20e-19!39;UBERON:0001890!8.20e-19!39;UBERON:0006240!8.20e-19!39;UBERON:0002791!9.79e-17!29;UBERON:0003528!9.79e-17!29;UBERON:0001893!9.79e-17!29;UBERON:0000956!7.86e-12!21;UBERON:0001869!7.86e-12!21;UBERON:0000203!7.86e-12!21;UBERON:0000153!2.39e-10!94;UBERON:0007811!9.35e-10!86;UBERON:0002619!1.30e-09!17;UBERON:0000468!2.06e-08!333;UBERON:0002021!3.95e-08!10;UBERON:0000411!3.95e-08!10;UBERON:0001950!3.95e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.88e-30,73;UBERON:0002346,2.03e-30,64;UBERON:0003075,2.03e-30,64;UBERON:0007284,2.03e-30,64;UBERON:0001016,8.32e-29,75;UBERON:0000073,2.96e-28,54;UBERON:0004121,5.30e-27,95;UBERON:0000924,5.30e-27,95;UBERON:0006601,5.30e-27,95;UBERON:0001049,1.15e-26,52;UBERON:0005068,1.15e-26,52;UBERON:0006241,1.15e-26,52;UBERON:0007135,1.15e-26,52;UBERON:0010371,1.95e-25,73;UBERON:0003056,3.86e-25,49;UBERON:0000955,3.95e-23,47;UBERON:0006238,3.95e-23,47;UBERON:0002616,1.52e-22,46;UBERON:0002020,2.23e-22,34;UBERON:0003080,3.62e-22,40;UBERON:0002780,2.02e-21,39;UBERON:0001890,2.02e-21,39;UBERON:0006240,2.02e-21,39;UBERON:0010314,4.74e-20,92;UBERON:0003528,5.55e-19,29;UBERON:0002791,5.55e-19,29;UBERON:0001893,5.55e-19,29;UBERON:0000956,2.82e-13,21;UBERON:0001869,2.82e-13,21;UBERON:0000203,2.82e-13,21;UBERON:0002619,1.07e-10,17;UBERON:0002021,3.23e-09,10;UBERON:0000411,3.23e-09,10;UBERON:0001950,3.23e-09,10;UBERON:0002420,6.19e-07,8;UBERON:0007245,6.19e-07,8;UBERON:0010009,6.19e-07,8;UBERON:0010011,6.19e-07,8;UBERON:0000454,6.19e-07,8
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|short_description=p1@Tub
|short_description=p1@Tub
}}
}}

Revision as of 09:58, 14 November 2012

Short description:p1@Tub
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tub_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_NM_021885, uc009jdf.1_5end
EntrezGene:Tub
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tub

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C382.55
Mouse Granule cells, donor2.CNhs12357.11731-123E381.46
Mouse Granule cells, donor3.CNhs12108.11636-122C772.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D551.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F554.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D952.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F147.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D552.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D245.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.47
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D350.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F356.95
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D765.59
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4123.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4124.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8112.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E445.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E554.03
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I647.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D663.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F652.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E175.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D729.39
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D612.18
adrenal gland, embryo E17.CNhs11043.1263-45I110.84
adrenal gland, embryo E18.CNhs11026.1262-18F512.51
adrenal gland, neonate N00.CNhs11191.1311-23C116.46
adrenal gland, neonate N25.CNhs11223.1377-27I310.30
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B242.75
cerebellum, neonate N30.CNhs11135.1395-42I235.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A472.50
corpus striatum, adult.CNhs10487.19-21D853.53
corpus striatum, neonate N00.CNhs11226.630-43F160.44
cortex, adult.CNhs10473.12-14D581.52
cortex, neonate N30.CNhs11107.1392-42F268.53
diencephalon, adult.CNhs10482.20-12F260.26
diencephalon, neonate N30.CNhs11201.1388-42B253.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E211.27
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D410.40
eyeball, neonate N00.CNhs11207.633-15C611.97
eyeball, neonate N01.CNhs11140.1532-43E713.45
eyeball, neonate N02.CNhs11205.1551-44G811.53
eyeball, neonate N16.CNhs11188.777-19A221.21
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E882.64
hippocampus, neonate N00.CNhs11228.627-43G189.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C245.44
medulla oblongata, neonate N30.CNhs11200.1396-42A340.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.77
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I937.59
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E610.44
pituitary gland, embryo E13.CNhs11009.370-44C78.41
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F62.68
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C931.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A199.96
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A287.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A388.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D775.10
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A484.95
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A592.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A690.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A789.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A892.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A992.68
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C914.36
whole body, embryo E13.CNhs10512.372-23H210.76
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B116.56
whole body, embryo E16.CNhs10514.453-14F219.12
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.84
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.54
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.25
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.08
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.99
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.09
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I529.48
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.25e-1623
neuroblast (sensu Vertebrata)2.25e-1623
neuron1.20e-1433
neuronal stem cell1.20e-1433
neuroblast1.20e-1433
electrically signaling cell1.20e-1433
ectodermal cell1.44e-1044
neurectodermal cell1.44e-1044
neural cell1.75e-1043
electrically responsive cell2.49e-1039
electrically active cell2.49e-1039

Uber anatomy
Ontology termp-valuen
central nervous system1.88e-3073
neurectoderm2.03e-3064
neural plate2.03e-3064
presumptive neural plate2.03e-3064
nervous system8.32e-2975
regional part of nervous system2.96e-2854
ectoderm-derived structure5.30e-2795
ectoderm5.30e-2795
presumptive ectoderm5.30e-2795
neural tube1.15e-2652
neural rod1.15e-2652
future spinal cord1.15e-2652
neural keel1.15e-2652
ecto-epithelium1.95e-2573
pre-chordal neural plate3.86e-2549
brain3.95e-2347
future brain3.95e-2347
regional part of brain1.52e-2246
gray matter2.23e-2234
anterior neural tube3.62e-2240
regional part of forebrain2.02e-2139
forebrain2.02e-2139
future forebrain2.02e-2139
structure with developmental contribution from neural crest4.74e-2092
brain grey matter5.55e-1929
regional part of telencephalon5.55e-1929
telencephalon5.55e-1929
cerebral cortex2.82e-1321
cerebral hemisphere2.82e-1321
pallium2.82e-1321
regional part of cerebral cortex1.07e-1017
occipital lobe3.23e-0910
visual cortex3.23e-0910
neocortex3.23e-0910
basal ganglion6.19e-078
nuclear complex of neuraxis6.19e-078
aggregate regional part of brain6.19e-078
collection of basal ganglia6.19e-078
cerebral subcortex6.19e-078







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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