FFCP PHASE1:Mm9::chr7:148932608..148932622,+: Difference between revisions
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|id=chr7:148932608..148932622,+ | |id=chr7:148932608..148932622,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.50e-24!43;UBERON:0005409!3.17e-19!59;UBERON:0000344!2.84e-14!15;UBERON:0000331!1.85e-11!3;UBERON:0002116!1.85e-11!3;UBERON:0001204!1.85e-11!3;UBERON:0001168!1.85e-11!3;UBERON:0001242!1.25e-09!13;UBERON:0000060!1.25e-09!13;UBERON:0001262!1.25e-09!13;UBERON:0004786!1.25e-09!13;UBERON:0001007!6.28e-09!128;UBERON:0001555!6.28e-09!128;UBERON:0007026!6.28e-09!128;UBERON:0004119!9.92e-09!130;UBERON:0000925!9.92e-09!130;UBERON:0006595!9.92e-09!130;UBERON:0004923!1.71e-08!24;UBERON:0001962!7.88e-08!2;UBERON:0001961!7.88e-08!2;UBERON:0001744!7.88e-08!2;UBERON:0004921!4.50e-07!126;UBERON:0004185!4.50e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!1.50e-24!43;UBERON:0005409!3.17e-19!59;UBERON:0000344!2.84e-14!15;UBERON:0000331!1.85e-11!3;UBERON:0002116!1.85e-11!3;UBERON:0001204!1.85e-11!3;UBERON:0001168!1.85e-11!3;UBERON:0001242!1.25e-09!13;UBERON:0000060!1.25e-09!13;UBERON:0001262!1.25e-09!13;UBERON:0004786!1.25e-09!13;UBERON:0001007!6.28e-09!128;UBERON:0001555!6.28e-09!128;UBERON:0007026!6.28e-09!128;UBERON:0004119!9.92e-09!130;UBERON:0000925!9.92e-09!130;UBERON:0006595!9.92e-09!130;UBERON:0004923!1.71e-08!24;UBERON:0001962!7.88e-08!2;UBERON:0001961!7.88e-08!2;UBERON:0001744!7.88e-08!2;UBERON:0004921!4.50e-07!126;UBERON:0004185!4.50e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.14e-38,31;UBERON:0005409,1.92e-28,47;UBERON:0002108,4.72e-13,4;UBERON:0004921,1.20e-10,114;UBERON:0001242,1.92e-10,13;UBERON:0001262,1.92e-10,13;UBERON:0004786,1.92e-10,13;UBERON:0001007,1.98e-10,116;UBERON:0001555,1.98e-10,116;UBERON:0007026,1.98e-10,116;UBERON:0004119,3.22e-10,118;UBERON:0000925,3.22e-10,118;UBERON:0006595,3.22e-10,118;UBERON:0000344,4.89e-09,15;UBERON:0000331,2.81e-08,3;UBERON:0002116,2.81e-08,3;UBERON:0001204,2.81e-08,3;UBERON:0001168,2.81e-08,3 | |||
|phase1_expression=0,0,0,0,0,1.6787927191189,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,0,0,0.861884930743556,5.13063232532209,1.26015064879965,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.05780226665418,0,0,0.128867461322093,0,0,0,1.89811624617805,1.4822905925161,1.75934646160189,1.98956472041151,0.38992817423824,6.29173586057955,13.400559092231,10.7536287557358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,1.6787927191189,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,0,0,0.861884930743556,5.13063232532209,1.26015064879965,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,1.05780226665418,0,0,0.128867461322093,0,0,0,1.89811624617805,1.4822905925161,1.75934646160189,1.98956472041151,0.38992817423824,6.29173586057955,13.400559092231,10.7536287557358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53652406521275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:148932608..148932622,+ | |short_description=p@chr7:148932608..148932622,+ | ||
}} | }} |
Revision as of 10:04, 14 November 2012
Short description: | p@chr7:148932608..148932622, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:148932608..148932622, + |
Coexpression cluster: | MCL_coexpression_mm9:171 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.14e-38 | 31 |
gastrointestinal system | 1.92e-28 | 47 |
small intestine | 4.72e-13 | 4 |
subdivision of digestive tract | 1.20e-10 | 114 |
intestinal mucosa | 1.92e-10 | 13 |
wall of intestine | 1.92e-10 | 13 |
gastrointestinal system mucosa | 1.92e-10 | 13 |
digestive system | 1.98e-10 | 116 |
digestive tract | 1.98e-10 | 116 |
primitive gut | 1.98e-10 | 116 |
endoderm-derived structure | 3.22e-10 | 118 |
endoderm | 3.22e-10 | 118 |
presumptive endoderm | 3.22e-10 | 118 |
mucosa | 4.89e-09 | 15 |
ileal mucosa | 2.81e-08 | 3 |
ileum | 2.81e-08 | 3 |
mucosa of small intestine | 2.81e-08 | 3 |
wall of small intestine | 2.81e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.