FFCP PHASE1:Mm9::chr15:77787088..77787153,-: Difference between revisions
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|id=chr15:77787088..77787153,- | |id=chr15:77787088..77787153,- | ||
|ontology_enrichment_celltype=CL:0000221!2.00e-08!44;CL:0000133!2.00e-08!44;CL:0000034!2.03e-08!97;CL:0002319!2.25e-08!43;CL:0000723!2.57e-07!91;CL:0000048!2.57e-07!91;CL:0000540!3.56e-07!33;CL:0000047!3.56e-07!33;CL:0000031!3.56e-07!33;CL:0000404!3.56e-07!33 | |ontology_enrichment_celltype=CL:0000221!2.00e-08!44;CL:0000133!2.00e-08!44;CL:0000034!2.03e-08!97;CL:0002319!2.25e-08!43;CL:0000723!2.57e-07!91;CL:0000048!2.57e-07!91;CL:0000540!3.56e-07!33;CL:0000047!3.56e-07!33;CL:0000031!3.56e-07!33;CL:0000404!3.56e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.63e-08,97;CL:0000221,1.93e-08,44;CL:0000133,1.93e-08,44;CL:0002319,2.17e-08,43;CL:0000723,2.10e-07,91;CL:0000048,2.10e-07,91;CL:0000540,3.46e-07,33;CL:0000047,3.46e-07,33;CL:0000031,3.46e-07,33;CL:0000404,3.46e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-19!73;UBERON:0005743!2.66e-19!73;UBERON:0000073!7.89e-19!75;UBERON:0001016!7.89e-19!75;UBERON:0004121!1.53e-18!102;UBERON:0000924!1.53e-18!102;UBERON:0006601!1.53e-18!102;UBERON:0000033!1.45e-16!63;UBERON:0007811!1.16e-15!86;UBERON:0000955!1.21e-15!50;UBERON:0006238!1.21e-15!50;UBERON:0000153!1.41e-15!94;UBERON:0002616!2.96e-15!49;UBERON:0001049!3.01e-14!52;UBERON:0005068!3.01e-14!52;UBERON:0006241!3.01e-14!52;UBERON:0007135!3.01e-14!52;UBERON:0002346!2.41e-13!71;UBERON:0003075!2.41e-13!71;UBERON:0007284!2.41e-13!71;UBERON:0003056!2.29e-12!49;UBERON:0003080!3.55e-12!40;UBERON:0002780!1.24e-11!39;UBERON:0001890!1.24e-11!39;UBERON:0006240!1.24e-11!39;UBERON:0002791!3.25e-10!29;UBERON:0003528!3.25e-10!29;UBERON:0001893!3.25e-10!29;UBERON:0002020!9.99e-10!34;UBERON:0000956!6.81e-09!21;UBERON:0001869!6.81e-09!21;UBERON:0000203!6.81e-09!21;UBERON:0000475!3.51e-07!200;UBERON:0002619!8.71e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!2.66e-19!73;UBERON:0005743!2.66e-19!73;UBERON:0000073!7.89e-19!75;UBERON:0001016!7.89e-19!75;UBERON:0004121!1.53e-18!102;UBERON:0000924!1.53e-18!102;UBERON:0006601!1.53e-18!102;UBERON:0000033!1.45e-16!63;UBERON:0007811!1.16e-15!86;UBERON:0000955!1.21e-15!50;UBERON:0006238!1.21e-15!50;UBERON:0000153!1.41e-15!94;UBERON:0002616!2.96e-15!49;UBERON:0001049!3.01e-14!52;UBERON:0005068!3.01e-14!52;UBERON:0006241!3.01e-14!52;UBERON:0007135!3.01e-14!52;UBERON:0002346!2.41e-13!71;UBERON:0003075!2.41e-13!71;UBERON:0007284!2.41e-13!71;UBERON:0003056!2.29e-12!49;UBERON:0003080!3.55e-12!40;UBERON:0002780!1.24e-11!39;UBERON:0001890!1.24e-11!39;UBERON:0006240!1.24e-11!39;UBERON:0002791!3.25e-10!29;UBERON:0003528!3.25e-10!29;UBERON:0001893!3.25e-10!29;UBERON:0002020!9.99e-10!34;UBERON:0000956!6.81e-09!21;UBERON:0001869!6.81e-09!21;UBERON:0000203!6.81e-09!21;UBERON:0000475!3.51e-07!200;UBERON:0002619!8.71e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.65e-20,95;UBERON:0000924,1.65e-20,95;UBERON:0006601,1.65e-20,95;UBERON:0001017,2.42e-19,73;UBERON:0001016,7.20e-19,75;UBERON:0010371,8.26e-17,73;UBERON:0002346,1.89e-15,64;UBERON:0003075,1.89e-15,64;UBERON:0007284,1.89e-15,64;UBERON:0000073,6.50e-15,54;UBERON:0000955,1.47e-14,47;UBERON:0006238,1.47e-14,47;UBERON:0001049,2.82e-14,52;UBERON:0005068,2.82e-14,52;UBERON:0006241,2.82e-14,52;UBERON:0007135,2.82e-14,52;UBERON:0002616,3.54e-14,46;UBERON:0003056,2.16e-12,49;UBERON:0003080,3.36e-12,40;UBERON:0002780,1.18e-11,39;UBERON:0001890,1.18e-11,39;UBERON:0006240,1.18e-11,39;UBERON:0003528,3.10e-10,29;UBERON:0002791,3.10e-10,29;UBERON:0001893,3.10e-10,29;UBERON:0002020,9.57e-10,34;UBERON:0000956,6.55e-09,21;UBERON:0001869,6.55e-09,21;UBERON:0000203,6.55e-09,21;UBERON:0002619,8.48e-07,17 | |||
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| ||
|short_description=p1@Foxred2 | |short_description=p1@Foxred2 | ||
}} | }} |
Revision as of 15:15, 14 November 2012
Short description: | p1@Foxred2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxred2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000016696, ENSMUST00000117725, ENSMUST00000129045, NM_001017983, NM_001168260, uc007woj.2, uc007wok.2, uc007wol.1_5end |
EntrezGene: | Foxred2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.63e-08 | 97 |
ectodermal cell | 1.93e-08 | 44 |
neurectodermal cell | 1.93e-08 | 44 |
neural cell | 2.17e-08 | 43 |
somatic stem cell | 2.10e-07 | 91 |
multi fate stem cell | 2.10e-07 | 91 |
neuron | 3.46e-07 | 33 |
neuronal stem cell | 3.46e-07 | 33 |
neuroblast | 3.46e-07 | 33 |
electrically signaling cell | 3.46e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.65e-20 | 95 |
ectoderm | 1.65e-20 | 95 |
presumptive ectoderm | 1.65e-20 | 95 |
central nervous system | 2.42e-19 | 73 |
nervous system | 7.20e-19 | 75 |
ecto-epithelium | 8.26e-17 | 73 |
neurectoderm | 1.89e-15 | 64 |
neural plate | 1.89e-15 | 64 |
presumptive neural plate | 1.89e-15 | 64 |
regional part of nervous system | 6.50e-15 | 54 |
brain | 1.47e-14 | 47 |
future brain | 1.47e-14 | 47 |
neural tube | 2.82e-14 | 52 |
neural rod | 2.82e-14 | 52 |
future spinal cord | 2.82e-14 | 52 |
neural keel | 2.82e-14 | 52 |
regional part of brain | 3.54e-14 | 46 |
pre-chordal neural plate | 2.16e-12 | 49 |
anterior neural tube | 3.36e-12 | 40 |
regional part of forebrain | 1.18e-11 | 39 |
forebrain | 1.18e-11 | 39 |
future forebrain | 1.18e-11 | 39 |
brain grey matter | 3.10e-10 | 29 |
regional part of telencephalon | 3.10e-10 | 29 |
telencephalon | 3.10e-10 | 29 |
gray matter | 9.57e-10 | 34 |
cerebral cortex | 6.55e-09 | 21 |
cerebral hemisphere | 6.55e-09 | 21 |
pallium | 6.55e-09 | 21 |
regional part of cerebral cortex | 8.48e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.