FFCP PHASE1:Mm9::chr7:148661165..148661191,+: Difference between revisions
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|id=chr7:148661165..148661191,+ | |id=chr7:148661165..148661191,+ | ||
|ontology_enrichment_celltype=CL:0000333!3.24e-07!10;CL:0000095!3.24e-07!10;CL:0000243!3.24e-07!10;CL:0000123!3.24e-07!10;CL:0000125!3.24e-07!10;CL:0000030!3.24e-07!10;CL:0000339!3.24e-07!10 | |ontology_enrichment_celltype=CL:0000333!3.24e-07!10;CL:0000095!3.24e-07!10;CL:0000243!3.24e-07!10;CL:0000123!3.24e-07!10;CL:0000125!3.24e-07!10;CL:0000030!3.24e-07!10;CL:0000339!3.24e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.16e-07,10;CL:0000095,3.16e-07,10;CL:0000243,3.16e-07,10;CL:0000123,3.16e-07,10;CL:0000125,3.16e-07,10;CL:0000030,3.16e-07,10;CL:0000339,3.16e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.17e-11!66;UBERON:0000466!1.50e-10!79;UBERON:0005172!7.13e-10!49;UBERON:0005173!7.13e-10!49;UBERON:0002417!7.13e-10!49;UBERON:0000916!7.13e-10!49;UBERON:0002100!7.79e-10!98;UBERON:0000926!1.43e-09!193;UBERON:0004120!1.43e-09!193;UBERON:0006603!1.43e-09!193;UBERON:0005177!1.64e-09!85;UBERON:0003914!4.06e-09!47;UBERON:0005256!6.22e-09!47;UBERON:0002107!2.24e-08!22;UBERON:0007499!2.24e-08!22;UBERON:0006925!2.24e-08!22;UBERON:0009497!2.24e-08!22;UBERON:0000015!2.24e-08!22;UBERON:0002423!2.24e-08!22;UBERON:0006235!2.24e-08!22;UBERON:0008835!2.24e-08!22;UBERON:0003894!2.24e-08!22;UBERON:0004161!2.24e-08!22;UBERON:0008836!2.24e-08!22;UBERON:0002365!6.26e-08!25;UBERON:0002330!6.26e-08!25;UBERON:0009854!1.42e-07!23;UBERON:0009856!1.42e-07!23 | |ontology_enrichment_uberon=UBERON:0009569!1.17e-11!66;UBERON:0000466!1.50e-10!79;UBERON:0005172!7.13e-10!49;UBERON:0005173!7.13e-10!49;UBERON:0002417!7.13e-10!49;UBERON:0000916!7.13e-10!49;UBERON:0002100!7.79e-10!98;UBERON:0000926!1.43e-09!193;UBERON:0004120!1.43e-09!193;UBERON:0006603!1.43e-09!193;UBERON:0005177!1.64e-09!85;UBERON:0003914!4.06e-09!47;UBERON:0005256!6.22e-09!47;UBERON:0002107!2.24e-08!22;UBERON:0007499!2.24e-08!22;UBERON:0006925!2.24e-08!22;UBERON:0009497!2.24e-08!22;UBERON:0000015!2.24e-08!22;UBERON:0002423!2.24e-08!22;UBERON:0006235!2.24e-08!22;UBERON:0008835!2.24e-08!22;UBERON:0003894!2.24e-08!22;UBERON:0004161!2.24e-08!22;UBERON:0008836!2.24e-08!22;UBERON:0002365!6.26e-08!25;UBERON:0002330!6.26e-08!25;UBERON:0009854!1.42e-07!23;UBERON:0009856!1.42e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.32e-13,90;UBERON:0005177,5.23e-12,79;UBERON:0009569,1.12e-11,66;UBERON:0005256,6.72e-10,45;UBERON:0005172,6.87e-10,49;UBERON:0005173,6.87e-10,49;UBERON:0002417,6.87e-10,49;UBERON:0000916,6.87e-10,49;UBERON:0003104,7.20e-10,61;UBERON:0009142,7.20e-10,61;UBERON:0003914,3.92e-09,47;UBERON:0002107,2.17e-08,22;UBERON:0007499,2.17e-08,22;UBERON:0006925,2.17e-08,22;UBERON:0009497,2.17e-08,22;UBERON:0000015,2.17e-08,22;UBERON:0002423,2.17e-08,22;UBERON:0006235,2.17e-08,22;UBERON:0008835,2.17e-08,22;UBERON:0003894,2.17e-08,22;UBERON:0004161,2.17e-08,22;UBERON:0008836,2.17e-08,22;UBERON:0002365,6.08e-08,25;UBERON:0002330,6.08e-08,25;UBERON:0009854,1.38e-07,23;UBERON:0009856,1.38e-07,23 | |||
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| ||
|short_description=p1@Tspan4 | |short_description=p1@Tspan4 | ||
}} | }} |
Revision as of 20:10, 14 November 2012
Short description: | p1@Tspan4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tspan4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2462 |
Association with transcript: | 26bp_to_ENSMUST00000026585, uc009kln.1_5end |
EntrezGene: | Tspan4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 3.16e-07 | 10 |
neuron associated cell | 3.16e-07 | 10 |
glial cell (sensu Vertebrata) | 3.16e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.16e-07 | 10 |
glial cell | 3.16e-07 | 10 |
glioblast | 3.16e-07 | 10 |
glioblast (sensu Vertebrata) | 3.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
trunk | 6.32e-13 | 90 |
trunk region element | 5.23e-12 | 79 |
subdivision of trunk | 1.12e-11 | 66 |
trunk mesenchyme | 6.72e-10 | 45 |
abdomen element | 6.87e-10 | 49 |
abdominal segment element | 6.87e-10 | 49 |
abdominal segment of trunk | 6.87e-10 | 49 |
abdomen | 6.87e-10 | 49 |
mesenchyme | 7.20e-10 | 61 |
entire embryonic mesenchyme | 7.20e-10 | 61 |
epithelial tube | 3.92e-09 | 47 |
liver | 2.17e-08 | 22 |
epithelial sac | 2.17e-08 | 22 |
digestive gland | 2.17e-08 | 22 |
epithelium of foregut-midgut junction | 2.17e-08 | 22 |
anatomical boundary | 2.17e-08 | 22 |
hepatobiliary system | 2.17e-08 | 22 |
foregut-midgut junction | 2.17e-08 | 22 |
hepatic diverticulum | 2.17e-08 | 22 |
liver primordium | 2.17e-08 | 22 |
septum transversum | 2.17e-08 | 22 |
liver bud | 2.17e-08 | 22 |
exocrine gland | 6.08e-08 | 25 |
exocrine system | 6.08e-08 | 25 |
digestive tract diverticulum | 1.38e-07 | 23 |
sac | 1.38e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.