FFCP PHASE1:Hg19::chr20:22806463..22806487,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000240!1.89e-14!6;CL:0000311!1.89e-14!6;CL:0000079!1.89e-14!6;CL:0000237!1.89e-14!6;CL:0000036!1.89e-14!6;CL:0000357!1.89e-14!6;CL:0000114!1.89e-14!6;CL:0002327!1.67e-12!4;CL:0002076!2.21e-10!43;CL:0000312!2.35e-10!5;CL:0002159!3.66e-10!13;CL:0002166!4.87e-08!3;CL:0002621!6.66e-08!3;CL:0000066!1.69e-07!254;CL:0000223!4.43e-07!59 | |ontology_enrichment_celltype=CL:0000240!1.89e-14!6;CL:0000311!1.89e-14!6;CL:0000079!1.89e-14!6;CL:0000237!1.89e-14!6;CL:0000036!1.89e-14!6;CL:0000357!1.89e-14!6;CL:0000114!1.89e-14!6;CL:0002327!1.67e-12!4;CL:0002076!2.21e-10!43;CL:0000312!2.35e-10!5;CL:0002159!3.66e-10!13;CL:0002166!4.87e-08!3;CL:0002621!6.66e-08!3;CL:0000066!1.69e-07!254;CL:0000223!4.43e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000312;2.27e-23;5!CL:0000240;1.15e-19;6!CL:0000311;1.15e-19;6!CL:0000079;1.15e-19;6!CL:0000237;1.15e-19;6!CL:0000362;1.80e-13;9!CL:0002159;5.15e-09;14!CL:0002327;2.43e-08;4 | |ontology_enrichment_celltype_v019=CL:0000312;2.27e-23;5!CL:0000240;1.15e-19;6!CL:0000311;1.15e-19;6!CL:0000079;1.15e-19;6!CL:0000237;1.15e-19;6!CL:0000362;1.80e-13;9!CL:0002159;5.15e-09;14!CL:0002327;2.43e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000312,2.54e-23,5;CL:0000240,1.26e-19,6;CL:0000311,1.26e-19,6;CL:0000079,1.26e-19,6;CL:0000237,1.26e-19,6;CL:0000036,1.26e-19,6;CL:0000357,1.26e-19,6;CL:0000114,1.26e-19,6;CL:0000362,1.91e-13,9;CL:0002159,5.36e-09,14;CL:0002327,2.26e-08,4;CL:0000076,1.21e-07,63;CL:0002076,8.70e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;1.15e-19;6!CL:0000114;1.15e-19;6!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2!UBERON:0007123;4.79e-07;5 | |ontology_enrichment_development_v019=CL:0000357;1.15e-19;6!CL:0000114;1.15e-19;6!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2!UBERON:0007123;4.79e-07;5 | ||
|ontology_enrichment_disease=DOID:5093!2.56e-12!4;DOID:1612!2.56e-12!4;DOID:3112!5.58e-07!1 | |ontology_enrichment_disease=DOID:5093!2.56e-12!4;DOID:1612!2.56e-12!4;DOID:3112!5.58e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3112;7.48e-30;1!DOID:1749;4.21e-09;14 | |ontology_enrichment_disease_v019=DOID:3112;7.48e-30;1!DOID:1749;4.21e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,7.48e-30,1;DOID:1749,4.21e-09,14;DOID:7,2.85e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001911!1.67e-12!4;UBERON:0005333!1.67e-12!4;UBERON:0008425!1.67e-12!4;UBERON:0005311!1.67e-12!4;UBERON:0003729!2.67e-10!5;UBERON:0001949!6.66e-08!3;UBERON:0001301!9.15e-07!1 | |ontology_enrichment_uberon=UBERON:0001911!1.67e-12!4;UBERON:0005333!1.67e-12!4;UBERON:0008425!1.67e-12!4;UBERON:0005311!1.67e-12!4;UBERON:0003729!2.67e-10!5;UBERON:0001949!6.66e-08!3;UBERON:0001301!9.15e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.16e-29;4!UBERON:0004785;3.16e-29;4!UBERON:0000974;7.13e-20;6!UBERON:0001723;8.17e-11;3!UBERON:0001033;8.17e-11;3!UBERON:0003729;9.94e-10;13!UBERON:0001003;1.78e-08;15!UBERON:0007376;1.78e-08;15!UBERON:0001911;2.43e-08;4!UBERON:0002046;4.79e-07;5!UBERON:0000161;6.01e-07;19!UBERON:0000166;6.01e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0003343;3.16e-29;4!UBERON:0004785;3.16e-29;4!UBERON:0000974;7.13e-20;6!UBERON:0001723;8.17e-11;3!UBERON:0001033;8.17e-11;3!UBERON:0003729;9.94e-10;13!UBERON:0001003;1.78e-08;15!UBERON:0007376;1.78e-08;15!UBERON:0001911;2.43e-08;4!UBERON:0002046;4.79e-07;5!UBERON:0000161;6.01e-07;19!UBERON:0000166;6.01e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.16e-29,4;UBERON:0004785,3.16e-29,4;UBERON:0000974,2.37e-12,10;UBERON:0001723,8.17e-11,3;UBERON:0001033,8.17e-11,3;UBERON:0010056,8.17e-11,3;UBERON:0003729,9.94e-10,13;UBERON:0001003,1.85e-08,15;UBERON:0007376,1.85e-08,15;UBERON:0007383,1.85e-08,15;UBERON:0001911,2.26e-08,4;UBERON:0005333,2.26e-08,4;UBERON:0008425,2.26e-08,4;UBERON:0005311,2.26e-08,4;UBERON:0008814,2.52e-07,18;UBERON:0002046,4.79e-07,5;UBERON:0004117,4.79e-07,5;UBERON:0007689,4.79e-07,5;UBERON:0007123,4.79e-07,5;UBERON:0003091,4.79e-07,5 | |||
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|short_description=p@chr20:22806463..22806487,+ | |short_description=p@chr20:22806463..22806487,+ | ||
}} | }} | ||
Revision as of 21:43, 15 November 2012
| Short description: | p@chr20:22806463..22806487, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr20:22806463..22806487, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| keratinocyte | 2.54e-23 | 5 |
| stratified squamous epithelial cell | 1.26e-19 | 6 |
| keratin accumulating cell | 1.26e-19 | 6 |
| stratified epithelial cell | 1.26e-19 | 6 |
| keratinizing barrier epithelial cell | 1.26e-19 | 6 |
| epithelial fate stem cell | 1.26e-19 | 6 |
| stratified epithelial stem cell | 1.26e-19 | 6 |
| surface ectodermal cell | 1.26e-19 | 6 |
| epidermal cell | 1.91e-13 | 9 |
| general ecto-epithelial cell | 5.36e-09 | 14 |
| mammary gland epithelial cell | 2.26e-08 | 4 |
| squamous epithelial cell | 1.21e-07 | 63 |
| endo-epithelial cell | 8.70e-07 | 42 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa of oral region | 3.16e-29 | 4 |
| respiratory system mucosa | 3.16e-29 | 4 |
| neck | 2.37e-12 | 10 |
| tongue | 8.17e-11 | 3 |
| gustatory system | 8.17e-11 | 3 |
| future tongue | 8.17e-11 | 3 |
| mouth mucosa | 9.94e-10 | 13 |
| skin epidermis | 1.85e-08 | 15 |
| outer epithelium | 1.85e-08 | 15 |
| enveloping layer of ectoderm | 1.85e-08 | 15 |
| mammary gland | 2.26e-08 | 4 |
| mammary bud | 2.26e-08 | 4 |
| mammary ridge | 2.26e-08 | 4 |
| mammary placode | 2.26e-08 | 4 |
| pharyngeal arch system | 2.52e-07 | 18 |
| thyroid gland | 4.79e-07 | 5 |
| pharyngeal pouch | 4.79e-07 | 5 |
| thyroid diverticulum | 4.79e-07 | 5 |
| pharyngeal pouch 2 | 4.79e-07 | 5 |
| thyroid primordium | 4.79e-07 | 5 |
| Ontology term | p-value | n |
|---|---|---|
| papillary adenocarcinoma | 7.48e-30 | 1 |
| squamous cell carcinoma | 4.21e-09 | 14 |
| disease of anatomical entity | 2.85e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
