FFCP PHASE1:Hg19::chr3:75719302..75719310,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000057!1.31e-16!75;CL:0000055!2.20e-14!180;CL:0002620!1.73e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.31e-16!75;CL:0000055!2.20e-14!180;CL:0002620!1.73e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.74e-09;12!CL:0002504;8.83e-08;3!CL:1000279;8.83e-08;3!CL:1000280;8.83e-08;3!CL:0002561;6.04e-07;2 | |ontology_enrichment_celltype_v019=CL:0002334;4.74e-09;12!CL:0002504;8.83e-08;3!CL:1000279;8.83e-08;3!CL:1000280;8.83e-08;3!CL:0002561;6.04e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,4.68e-09,12;CL:0000057,5.87e-08,76;CL:0002504,6.04e-08,3;CL:1000279,6.04e-08,3;CL:1000280,6.04e-08,3;CL:0002561,6.10e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.30e-13!95;UBERON:0000475!2.11e-11!365;UBERON:0000914!1.15e-07!83;UBERON:0002329!1.15e-07!83;UBERON:0003077!1.15e-07!83;UBERON:0003059!1.15e-07!83;UBERON:0007282!1.15e-07!83;UBERON:0009618!1.15e-07!83;UBERON:0007285!1.15e-07!83;UBERON:0001444!3.37e-07!48;UBERON:0002199!3.88e-07!45;UBERON:0002416!3.88e-07!45;UBERON:0002097!9.88e-07!40 | |ontology_enrichment_uberon=UBERON:0003102!1.30e-13!95;UBERON:0000475!2.11e-11!365;UBERON:0000914!1.15e-07!83;UBERON:0002329!1.15e-07!83;UBERON:0003077!1.15e-07!83;UBERON:0003059!1.15e-07!83;UBERON:0007282!1.15e-07!83;UBERON:0009618!1.15e-07!83;UBERON:0007285!1.15e-07!83;UBERON:0001444!3.37e-07!48;UBERON:0002199!3.88e-07!45;UBERON:0002416!3.88e-07!45;UBERON:0002097!9.88e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.04e-09;5!UBERON:0002216;3.04e-09;5!UBERON:0011134;3.04e-09;5!UBERON:0002209;3.04e-09;5!UBERON:0002213;3.04e-09;5!UBERON:0007844;3.04e-09;5!UBERON:0011138;3.04e-09;5!UBERON:0001130;3.04e-09;5!UBERON:0001066;3.04e-09;5!UBERON:0001468;3.04e-09;5!UBERON:0005933;6.04e-07;2!UBERON:0005942;6.04e-07;2!UBERON:0005932;6.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0011135;3.04e-09;5!UBERON:0002216;3.04e-09;5!UBERON:0011134;3.04e-09;5!UBERON:0002209;3.04e-09;5!UBERON:0002213;3.04e-09;5!UBERON:0007844;3.04e-09;5!UBERON:0011138;3.04e-09;5!UBERON:0001130;3.04e-09;5!UBERON:0001066;3.04e-09;5!UBERON:0001468;3.04e-09;5!UBERON:0005933;6.04e-07;2!UBERON:0005942;6.04e-07;2!UBERON:0005932;6.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.42e-09,5;UBERON:0002216,3.42e-09,5;UBERON:0011134,3.42e-09,5;UBERON:0002209,3.42e-09,5;UBERON:0002213,3.42e-09,5;UBERON:0005856,3.42e-09,5;UBERON:0005866,3.42e-09,5;UBERON:0005863,3.42e-09,5;UBERON:0007844,3.42e-09,5;UBERON:0011138,3.42e-09,5;UBERON:0001130,3.42e-09,5;UBERON:0001066,3.42e-09,5;UBERON:0001468,3.42e-09,5;UBERON:0005933,6.10e-07,2;UBERON:0005942,6.10e-07,2;UBERON:0005932,6.10e-07,2 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.986680828671798,0,0.446961094427288,0,0,0,0.261185628199839,1.47440361900905,0,0,1.31883489114227,3.34169152992126,2.65117900582333,0,0,0,0,0.123121058076788,1.22400414746552,0.313454721478088,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,4.47274756525787,0.379891534993739,1.58891016975863,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0.490385709340376,0,0.576175924479999,1.17160715916898,0.936480230490962,0,1.19558944441441,0.352303495931295,0.161872944368132,0.280901613404497,0.61246251376468,4.42203542322365,2.89312187292143,0,0.741800787835671,0,0.718618141816238,1.85169725349473,3.37820003654303,0.277064115484183,0,0.612975591598039,0.150238058906597,0,0.538168907066586,0.427114777637135,0.635795703478686,0.900273288253207,0.618315175430633,0,1.30281799432113,1.5189869901714,1.16924406193438,0,0.460249493211497,0.323292113637624,0.710019185033229,0.503760491138201,0.508681776931463,0,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0,0,1.28648187638577,0,5.57241513638375,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.219500570817251,0,0,2.40729957412177,1.62904152655162,7.27954349695705,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0.290633938513962,0,0,0,0.414656231081544,0.864719720501769,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0.560655421726804,0,1.3200891447771,0,0,1.690605505112,0.797814349754612,2.08014873822732,1.28603687131071,1.41849132023278,2.39779961114489,1.14382394926518,0,0.823240336780769,0.977208552881205,0,0,0,0,0,0,0,0,0.718874566474748,1.14861935834114,0,2.46128221334885,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,3.0672872929785,2.00068208423871,0.813795071099207,0.207970861530807,0.356857977594324,1.41932173530541,0.117141414992713,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0.781952530212746,1.76221041716467,1.37257369524342,0,0,0,0,0,0.604780586659361,0.496215615637554,1.68808170616869,1.12264037773229,0.768834895534206,1.53512174720011,1.76939313257968,0,0.308419387605311,1.24293207719189,2.38168752440047,0,1.27831416305955,0,0,0.644566922551274,0.229628896329213,0.546273504020151,0.131124414959424,0.902399225814824,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.812839312631559,1.50506932156456,0.254876273045038,0,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,2.29706215198469,1.30012049207304,0,0.676695028044854,0.154048617114644,0,0,1.50388342815583,0.435050081742686,0.596586391912706,0.0890320356467374,0.165284915360978,0.576570202095319,1.27612712494584,1.11273558941105,1.85938219718914,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0,0,1.86079184679834,0.316379424718726,0.953150969619124,3.07077349573601,2.56763392820352,0,0,1.97859703341646,1.09814811894422,1.64937363283961,0,0,0,1.46290121726877,0,0,0.272999822815972,0.707027159768564,0,0,0,0,3.47265320560013,1.9676842561399,0,0,0.281695602532241,0.573645408816206,0.589494246078727,0,0.354761064070598,0,0,1.13841952129715,6.29882496440969,0.288666338176536,0,0,0.0941438007767792,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0,0,0,0,1.18375320854817,0,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0,1.89184635718778,0,0,0,0.581934098930517,0,0,0,0.19871461170299,0,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.679872549120754,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0,0.934853239388898,0,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0.932623203496683,0.443565449968902,0.63718706865481,0,0.621051827505038,0.829412415681711,1.06336685823198,0,0,0,0,0.363697318405119,0.429642228169954,0.464033759878494,2.3885753321917,0,0.343395705182793,0.673498977531838,0,2.50405779529494,0.857766365499703,0,0,3.70435958918134,0.489473409012935,1.79088841081487,0,1.09642024789354,0.176689145945881,0,0.16894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| ||
|short_description=p@chr3:75719302..75719310,- | |short_description=p@chr3:75719302..75719310,- | ||
}} | }} |
Revision as of 03:06, 16 November 2012
Short description: | p@chr3:75719302..75719310, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:75719302..75719310, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 4.68e-09 | 12 |
fibroblast | 5.87e-08 | 76 |
enteric smooth muscle cell | 6.04e-08 | 3 |
smooth muscle cell of large intestine | 6.04e-08 | 3 |
smooth muscle cell of colon | 6.04e-08 | 3 |
outer root sheath cell | 6.10e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 3.42e-09 | 5 |
symphysis | 3.42e-09 | 5 |
nonsynovial joint | 3.42e-09 | 5 |
fibrous joint | 3.42e-09 | 5 |
cartilaginous joint | 3.42e-09 | 5 |
developing mesenchymal condensation | 3.42e-09 | 5 |
pre-cartilage condensation | 3.42e-09 | 5 |
cartilaginous condensation | 3.42e-09 | 5 |
cartilage element | 3.42e-09 | 5 |
post-cranial axial skeletal system | 3.42e-09 | 5 |
vertebral column | 3.42e-09 | 5 |
intervertebral disk | 3.42e-09 | 5 |
intervertebral joint | 3.42e-09 | 5 |
hair root sheath | 6.10e-07 | 2 |
hair outer root sheath | 6.10e-07 | 2 |
bulb of hair follicle | 6.10e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.