FFCP PHASE1:Hg19::chr15:27018884..27018916,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000047!6.87e-12!8;CL:0000540!1.72e-09!6;CL:0000031!1.72e-09!6;CL:0000404!1.72e-09!6;CL:0002322!4.96e-09!5;CL:0002319!7.10e-09!25;CL:0000133!5.42e-08!59 | |ontology_enrichment_celltype=CL:0000047!6.87e-12!8;CL:0000540!1.72e-09!6;CL:0000031!1.72e-09!6;CL:0000404!1.72e-09!6;CL:0002322!4.96e-09!5;CL:0002319!7.10e-09!25;CL:0000133!5.42e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.57e-15;6!CL:0000404;3.57e-15;6!CL:0002322;1.70e-14;5!CL:0002319;3.66e-11;25!CL:0002321;9.79e-11;15 | |ontology_enrichment_celltype_v019=CL:0000540;3.57e-15;6!CL:0000404;3.57e-15;6!CL:0002322;1.70e-14;5!CL:0002319;3.66e-11;25!CL:0002321;9.79e-11;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.80e-19,8;CL:0000540,2.62e-15,6;CL:0000031,2.62e-15,6;CL:0000404,2.62e-15,6;CL:0002322,1.64e-14,5;CL:0002319,3.47e-11,25;CL:0000133,2.12e-09,59;CL:0000221,5.56e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;3.57e-15;6!UBERON:0006601;2.39e-08;82 | |ontology_enrichment_development_v019=CL:0000031;3.57e-15;6!UBERON:0006601;2.39e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;3.03e-08;22!DOID:2994;3.03e-08;22!DOID:169;3.37e-07;6 | |ontology_enrichment_disease_v019=DOID:3095;3.03e-08;22!DOID:2994;3.03e-08;22!DOID:169;3.37e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,3.06e-08,22;DOID:2994,3.06e-08,22;DOID:169,3.40e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!6.14e-46!82;UBERON:0005743!1.74e-44!86;UBERON:0000073!6.46e-44!94;UBERON:0001016!6.46e-44!94;UBERON:0001049!9.76e-36!57;UBERON:0005068!9.76e-36!57;UBERON:0006241!9.76e-36!57;UBERON:0007135!9.76e-36!57;UBERON:0002780!7.13e-35!41;UBERON:0001890!7.13e-35!41;UBERON:0006240!7.13e-35!41;UBERON:0003080!9.18e-34!42;UBERON:0000955!1.29e-33!69;UBERON:0006238!1.29e-33!69;UBERON:0001893!3.10e-32!34;UBERON:0002020!7.29e-32!34;UBERON:0003528!7.29e-32!34;UBERON:0003075!4.52e-31!86;UBERON:0007284!4.52e-31!86;UBERON:0002791!6.40e-31!33;UBERON:0001869!7.69e-31!32;UBERON:0002616!9.06e-31!59;UBERON:0002346!3.42e-30!90;UBERON:0003056!7.41e-28!61;UBERON:0002619!5.17e-27!22;UBERON:0004121!3.75e-25!169;UBERON:0000956!4.52e-25!25;UBERON:0000203!4.52e-25!25;UBERON:0000924!6.24e-25!173;UBERON:0006601!6.24e-25!173;UBERON:0001950!9.29e-25!20;UBERON:0007023!5.70e-23!115;UBERON:0000153!9.65e-21!129;UBERON:0007811!9.65e-21!129;UBERON:0000033!6.30e-19!123;UBERON:0002420!3.63e-09!9;UBERON:0007245!3.63e-09!9;UBERON:0010009!3.63e-09!9;UBERON:0010011!3.63e-09!9;UBERON:0000454!3.63e-09!9;UBERON:0000200!7.76e-09!6;UBERON:0001871!9.27e-09!7;UBERON:0002308!3.15e-08!9;UBERON:0000125!3.15e-08!9;UBERON:0000475!6.30e-08!365;UBERON:0000349!8.84e-08!5;UBERON:0001872!1.06e-07!5;UBERON:0002021!1.17e-07!5;UBERON:0000025!9.37e-07!194 | |ontology_enrichment_uberon=UBERON:0001017!6.14e-46!82;UBERON:0005743!1.74e-44!86;UBERON:0000073!6.46e-44!94;UBERON:0001016!6.46e-44!94;UBERON:0001049!9.76e-36!57;UBERON:0005068!9.76e-36!57;UBERON:0006241!9.76e-36!57;UBERON:0007135!9.76e-36!57;UBERON:0002780!7.13e-35!41;UBERON:0001890!7.13e-35!41;UBERON:0006240!7.13e-35!41;UBERON:0003080!9.18e-34!42;UBERON:0000955!1.29e-33!69;UBERON:0006238!1.29e-33!69;UBERON:0001893!3.10e-32!34;UBERON:0002020!7.29e-32!34;UBERON:0003528!7.29e-32!34;UBERON:0003075!4.52e-31!86;UBERON:0007284!4.52e-31!86;UBERON:0002791!6.40e-31!33;UBERON:0001869!7.69e-31!32;UBERON:0002616!9.06e-31!59;UBERON:0002346!3.42e-30!90;UBERON:0003056!7.41e-28!61;UBERON:0002619!5.17e-27!22;UBERON:0004121!3.75e-25!169;UBERON:0000956!4.52e-25!25;UBERON:0000203!4.52e-25!25;UBERON:0000924!6.24e-25!173;UBERON:0006601!6.24e-25!173;UBERON:0001950!9.29e-25!20;UBERON:0007023!5.70e-23!115;UBERON:0000153!9.65e-21!129;UBERON:0007811!9.65e-21!129;UBERON:0000033!6.30e-19!123;UBERON:0002420!3.63e-09!9;UBERON:0007245!3.63e-09!9;UBERON:0010009!3.63e-09!9;UBERON:0010011!3.63e-09!9;UBERON:0000454!3.63e-09!9;UBERON:0000200!7.76e-09!6;UBERON:0001871!9.27e-09!7;UBERON:0002308!3.15e-08!9;UBERON:0000125!3.15e-08!9;UBERON:0000475!6.30e-08!365;UBERON:0000349!8.84e-08!5;UBERON:0001872!1.06e-07!5;UBERON:0002021!1.17e-07!5;UBERON:0000025!9.37e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.25e-42;20!UBERON:0002619;2.35e-42;22!UBERON:0001869;6.49e-39;32!UBERON:0000956;9.16e-37;25!UBERON:0000203;9.16e-37;25!UBERON:0002791;5.00e-36;32!UBERON:0001893;1.79e-35;34!UBERON:0003528;2.49e-33;34!UBERON:0002020;2.49e-33;34!UBERON:0002780;5.43e-25;41!UBERON:0001890;5.43e-25;41!UBERON:0000073;4.21e-15;53!UBERON:0002616;4.21e-15;53!UBERON:0001017;5.13e-15;75!UBERON:0000955;8.76e-15;68!UBERON:0000200;2.65e-14;6!UBERON:0001016;6.28e-13;83!UBERON:0001871;1.16e-12;6!UBERON:0002021;2.90e-12;5!UBERON:0001872;4.32e-12;5!UBERON:0002420;1.66e-09;9!UBERON:0007245;1.66e-09;9!UBERON:0010009;1.66e-09;9!UBERON:0010011;1.66e-09;9!UBERON:0000454;1.66e-09;9!UBERON:0000349;1.52e-08;5!UBERON:0001870;5.47e-08;3!UBERON:0000922;4.54e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.25e-42;20!UBERON:0002619;2.35e-42;22!UBERON:0001869;6.49e-39;32!UBERON:0000956;9.16e-37;25!UBERON:0000203;9.16e-37;25!UBERON:0002791;5.00e-36;32!UBERON:0001893;1.79e-35;34!UBERON:0003528;2.49e-33;34!UBERON:0002020;2.49e-33;34!UBERON:0002780;5.43e-25;41!UBERON:0001890;5.43e-25;41!UBERON:0000073;4.21e-15;53!UBERON:0002616;4.21e-15;53!UBERON:0001017;5.13e-15;75!UBERON:0000955;8.76e-15;68!UBERON:0000200;2.65e-14;6!UBERON:0001016;6.28e-13;83!UBERON:0001871;1.16e-12;6!UBERON:0002021;2.90e-12;5!UBERON:0001872;4.32e-12;5!UBERON:0002420;1.66e-09;9!UBERON:0007245;1.66e-09;9!UBERON:0010009;1.66e-09;9!UBERON:0010011;1.66e-09;9!UBERON:0000454;1.66e-09;9!UBERON:0000349;1.52e-08;5!UBERON:0001870;5.47e-08;3!UBERON:0000922;4.54e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.52e-44,32;UBERON:0001950,2.86e-42,20;UBERON:0002619,3.17e-42,22;UBERON:0001893,5.77e-41,34;UBERON:0001016,8.04e-41,89;UBERON:0002791,3.22e-40,32;UBERON:0001017,3.19e-39,81;UBERON:0003528,1.67e-37,34;UBERON:0002020,1.67e-37,34;UBERON:0000956,1.19e-36,25;UBERON:0000203,1.19e-36,25;UBERON:0002780,1.55e-35,41;UBERON:0001890,1.55e-35,41;UBERON:0003080,1.55e-35,41;UBERON:0006240,1.55e-35,41;UBERON:0000955,2.72e-27,68;UBERON:0006238,2.72e-27,68;UBERON:0000073,6.42e-26,53;UBERON:0002616,6.42e-26,53;UBERON:0001049,3.74e-24,56;UBERON:0005068,3.74e-24,56;UBERON:0006241,3.74e-24,56;UBERON:0007135,3.74e-24,56;UBERON:0003056,1.37e-23,61;UBERON:0004121,3.14e-20,171;UBERON:0000924,3.14e-20,171;UBERON:0006601,3.14e-20,171;UBERON:0003075,1.11e-15,82;UBERON:0007284,1.11e-15,82;UBERON:0011216,2.75e-15,223;UBERON:0002346,1.28e-14,86;UBERON:0000200,3.55e-14,6;UBERON:0010371,4.10e-14,104;UBERON:0001871,1.51e-12,6;UBERON:0001872,3.28e-12,5;UBERON:0002021,3.88e-12,5;UBERON:0007023,5.74e-10,114;UBERON:0002420,1.80e-09,9;UBERON:0007245,1.80e-09,9;UBERON:0010009,1.80e-09,9;UBERON:0010011,1.80e-09,9;UBERON:0000454,1.80e-09,9;UBERON:0010314,2.34e-09,132;UBERON:0000349,1.70e-08,5;UBERON:0001870,5.03e-08,3 | |||
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| ||
|short_description=p3@GABRB3 | |short_description=p3@GABRB3 | ||
}} | }} |
Revision as of 07:12, 17 November 2012
Short description: | p3@GABRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GABRB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000554722_5end |
EntrezGene: | GABRB3 |
HGNC: | 4083 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.80e-19 | 8 |
neuron | 2.62e-15 | 6 |
neuroblast | 2.62e-15 | 6 |
electrically signaling cell | 2.62e-15 | 6 |
embryonic stem cell | 1.64e-14 | 5 |
neural cell | 3.47e-11 | 25 |
neurectodermal cell | 2.12e-09 | 59 |
ectodermal cell | 5.56e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.06e-08 | 22 |
germ cell cancer | 3.06e-08 | 22 |
neuroendocrine tumor | 3.40e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.