FFCP PHASE1:Hg19::chr4:165953213..165953229,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!4.08e-85!7;CL:0000586!4.08e-85!7 | |ontology_enrichment_celltype=CL:0000039!4.08e-85!7;CL:0000586!4.08e-85!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.12e-117;7!CL:0000586;7.12e-117;7!CL:0000083;1.57e-09;4 | |ontology_enrichment_celltype_v019=CL:0000039;7.12e-117;7!CL:0000586;7.12e-117;7!CL:0000083;1.57e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.06e-117,7;CL:0000586,9.06e-117,7;CL:0000083,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.61e-53;10!UBERON:0005564;4.61e-53;10 | |ontology_enrichment_development_v019=UBERON:0009117;4.61e-53;10!UBERON:0005564;4.61e-53;10 | ||
|ontology_enrichment_disease=DOID:3095!1.37e-36!22;DOID:2994!1.37e-36!22;DOID:1799!4.44e-18!1;DOID:10165!4.44e-18!1;DOID:1798!4.44e-18!1;DOID:0050687!7.08e-07!143 | |ontology_enrichment_disease=DOID:3095!1.37e-36!22;DOID:2994!1.37e-36!22;DOID:1799!4.44e-18!1;DOID:10165!4.44e-18!1;DOID:1798!4.44e-18!1;DOID:0050687!7.08e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;9.19e-38;22!DOID:2994;9.19e-38;22!DOID:1799;7.06e-34;1!DOID:10165;7.06e-34;1!DOID:1798;7.06e-34;1!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | |ontology_enrichment_disease_v019=DOID:3095;9.19e-38;22!DOID:2994;9.19e-38;22!DOID:1799;7.06e-34;1!DOID:10165;7.06e-34;1!DOID:1798;7.06e-34;1!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,9.92e-38,22;DOID:2994,9.92e-38,22;DOID:1799,5.05e-34,1;DOID:10165,5.05e-34,1;DOID:1798,5.05e-34,1;DOID:1793,1.44e-09,4;DOID:0050687,1.02e-08,143;DOID:305,3.05e-08,106;DOID:170,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.16e-74!8;UBERON:0003135!5.01e-54!11;UBERON:0000991!2.53e-28!21;UBERON:0009196!2.53e-28!21;UBERON:0009117!2.53e-28!21;UBERON:0005564!2.53e-28!21;UBERON:0004176!4.92e-27!22;UBERON:0003101!4.92e-27!22;UBERON:0000079!4.92e-27!22;UBERON:0002323!2.22e-17!46;UBERON:0003133!1.44e-16!48;UBERON:0004458!2.70e-16!49;UBERON:0005156!2.05e-13!59;UBERON:0000990!2.05e-13!59;UBERON:0003886!1.36e-12!63;UBERON:0002553!2.70e-11!70;UBERON:0000464!1.87e-07!104 | |ontology_enrichment_uberon=UBERON:0000473!3.16e-74!8;UBERON:0003135!5.01e-54!11;UBERON:0000991!2.53e-28!21;UBERON:0009196!2.53e-28!21;UBERON:0009117!2.53e-28!21;UBERON:0005564!2.53e-28!21;UBERON:0004176!4.92e-27!22;UBERON:0003101!4.92e-27!22;UBERON:0000079!4.92e-27!22;UBERON:0002323!2.22e-17!46;UBERON:0003133!1.44e-16!48;UBERON:0004458!2.70e-16!49;UBERON:0005156!2.05e-13!59;UBERON:0000990!2.05e-13!59;UBERON:0003886!1.36e-12!63;UBERON:0002553!2.70e-11!70;UBERON:0000464!1.87e-07!104 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.33e-66;8!UBERON:0003135;2.54e-48;11!UBERON:0000991;1.05e-25;21!UBERON:0003101;1.43e-24;22!UBERON:0000079;1.43e-24;22!UBERON:0002323;5.08e-17;45!UBERON:0002553;6.52e-11;52!UBERON:0004458;1.38e-10;48!UBERON:0003133;1.56e-09;44!UBERON:0000922;3.26e-09;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.33e-66;8!UBERON:0003135;2.54e-48;11!UBERON:0000991;1.05e-25;21!UBERON:0003101;1.43e-24;22!UBERON:0000079;1.43e-24;22!UBERON:0002323;5.08e-17;45!UBERON:0002553;6.52e-11;52!UBERON:0004458;1.38e-10;48!UBERON:0003133;1.56e-09;44!UBERON:0000922;3.26e-09;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.12e-66,8;UBERON:0003135,2.86e-48,11;UBERON:0000991,1.12e-25,21;UBERON:0009196,1.12e-25,21;UBERON:0009117,1.12e-25,21;UBERON:0005564,1.12e-25,21;UBERON:0004176,1.51e-24,22;UBERON:0003101,1.51e-24,22;UBERON:0000079,1.51e-24,22;UBERON:0002323,2.13e-18,46;UBERON:0004458,2.63e-17,49;UBERON:0003886,9.39e-16,54;UBERON:0002553,5.26e-14,61;UBERON:0003133,1.32e-11,48;UBERON:0005156,1.52e-09,59;UBERON:0000990,1.52e-09,59 | |||
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|short_description=p2@TRIM60 | |short_description=p2@TRIM60 | ||
}} | }} |
Revision as of 08:40, 18 November 2012
Short description: | p2@TRIM60 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRIM60_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | 61bp_to_ENST00000507119_5end |
EntrezGene: | TRIM60 |
HGNC: | 21162 |
UniProt: | D6RAS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.06e-117 | 7 |
germ cell | 9.06e-117 | 7 |
epithelial cell of pancreas | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 5.12e-66 | 8 |
male reproductive organ | 2.86e-48 | 11 |
gonad | 1.12e-25 | 21 |
indifferent external genitalia | 1.12e-25 | 21 |
indifferent gonad | 1.12e-25 | 21 |
gonad primordium | 1.12e-25 | 21 |
external genitalia | 1.51e-24 | 22 |
male organism | 1.51e-24 | 22 |
male reproductive system | 1.51e-24 | 22 |
body cavity | 2.13e-18 | 46 |
body cavity or lining | 2.63e-17 | 49 |
body cavity precursor | 9.39e-16 | 54 |
anatomical cavity | 5.26e-14 | 61 |
reproductive organ | 1.32e-11 | 48 |
reproductive structure | 1.52e-09 | 59 |
reproductive system | 1.52e-09 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 9.92e-38 | 22 |
germ cell cancer | 9.92e-38 | 22 |
islet cell tumor | 5.05e-34 | 1 |
endocrine pancreas cancer | 5.05e-34 | 1 |
pancreatic endocrine carcinoma | 5.05e-34 | 1 |
pancreatic cancer | 1.44e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |
carcinoma | 3.05e-08 | 106 |
endocrine gland cancer | 8.48e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.