FFCP PHASE1:Hg19::chr15:56365882..56365895,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002322!8.69e-14!5 | |ontology_enrichment_celltype=CL:0002322!8.69e-14!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.86e-31;5!CL:0000159;3.70e-13;2!CL:0002321;3.96e-10;15!CL:0002621;7.29e-09;3!CL:0000313;1.42e-07;1!CL:0002581;2.91e-07;1!CL:0000319;2.91e-07;1 | |ontology_enrichment_celltype_v019=CL:0002322;9.86e-31;5!CL:0000159;3.70e-13;2!CL:0002321;3.96e-10;15!CL:0002621;7.29e-09;3!CL:0000313;1.42e-07;1!CL:0002581;2.91e-07;1!CL:0000319;2.91e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.30e-31,5;CL:0000159,5.20e-13,2;CL:0002621,7.60e-09,3;CL:0000313,1.51e-07,1;CL:0002581,3.01e-07,1;CL:0000319,3.84e-07,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:299!7.81e-10!25;DOID:120!1.08e-08!27;DOID:4362!4.44e-08!5;DOID:193!6.28e-08!29 | |ontology_enrichment_disease=DOID:299!7.81e-10!25;DOID:120!1.08e-08!27;DOID:4362!4.44e-08!5;DOID:193!6.28e-08!29 | ||
|ontology_enrichment_disease_v019=DOID:5093;3.60e-14;4!DOID:1612;3.60e-14;4!DOID:299;4.64e-11;25!DOID:3151;1.03e-07;1!DOID:3149;1.03e-07;1!DOID:2152;1.42e-07;1!DOID:178;2.91e-07;1!DOID:326;2.91e-07;1!DOID:3978;2.91e-07;1!DOID:3394;2.91e-07;1!DOID:3030;2.91e-07;1!DOID:5844;2.91e-07;1 | |ontology_enrichment_disease_v019=DOID:5093;3.60e-14;4!DOID:1612;3.60e-14;4!DOID:299;4.64e-11;25!DOID:3151;1.03e-07;1!DOID:3149;1.03e-07;1!DOID:2152;1.42e-07;1!DOID:178;2.91e-07;1!DOID:326;2.91e-07;1!DOID:3978;2.91e-07;1!DOID:3394;2.91e-07;1!DOID:3030;2.91e-07;1!DOID:5844;2.91e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,3.61e-14,4;DOID:1612,3.61e-14,4;DOID:299,4.43e-11,25;DOID:3151,1.18e-07,1;DOID:3149,1.18e-07,1;DOID:2152,1.51e-07,1;DOID:3030,3.84e-07,1;DOID:178,4.09e-07,1;DOID:326,4.09e-07,1;DOID:3978,4.09e-07,1;DOID:3394,4.09e-07,1;DOID:5844,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005795!4.98e-18!22;UBERON:0003975!6.71e-18!22;UBERON:0000995!3.86e-16!21;UBERON:0003134!4.62e-16!37;UBERON:0000474!4.62e-16!37;UBERON:0003100!7.66e-16!41;UBERON:0004175!2.51e-15!25;UBERON:0003133!2.53e-11!48;UBERON:0000002!6.52e-10!6;UBERON:0001560!6.52e-10!6;UBERON:0005156!2.12e-08!59;UBERON:0000990!2.12e-08!59 | |ontology_enrichment_uberon=UBERON:0005795!4.98e-18!22;UBERON:0003975!6.71e-18!22;UBERON:0000995!3.86e-16!21;UBERON:0003134!4.62e-16!37;UBERON:0000474!4.62e-16!37;UBERON:0003100!7.66e-16!41;UBERON:0004175!2.51e-15!25;UBERON:0003133!2.53e-11!48;UBERON:0000002!6.52e-10!6;UBERON:0001560!6.52e-10!6;UBERON:0005156!2.12e-08!59;UBERON:0000990!2.12e-08!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;7.29e-09;3!UBERON:0003929;2.61e-08;7!UBERON:0004911;1.42e-07;1!UBERON:0003350;2.51e-07;8!UBERON:0005795;2.91e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001949;7.29e-09;3!UBERON:0003929;2.61e-08;7!UBERON:0004911;1.42e-07;1!UBERON:0003350;2.51e-07;8!UBERON:0005795;2.91e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,7.60e-09,3;UBERON:0004911,1.51e-07,1;UBERON:0003350,2.57e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.36373060295417,0,2.92736894711029,1.59035721985782,3.25343040034651,1.86589899027667,4.54177531576131,4.74470566798579,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,1.84780341018745,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19040304263846,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.83654246567162,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.632994193584081,3.10142335502381,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,1.90915712168644,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,6.84429839571811,0.160317640503067,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,9.7652999984036,21.6028975775176,0,0,0,3.01891218839339,0.788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0.80057074828547,0.352675943690684,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,3.82882366312754,0,0,0,1.53314913167514,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0.22910686854405,0,0,2.34896406775364,0,0,0,0,0,0,2.33939463462106,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0,0,0,0,0,0,0,0,0,0,0,1.42838658878244,0,0,0,0,0,0,3.08009970976753,0,0,0,0,0,0,0,0,0.244482888365733,1.62758471326295,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54608682530637,1.36373060295417,0,2.92736894711029,1.59035721985782,3.25343040034651,1.86589899027667,4.54177531576131,4.74470566798579,0,0,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,1.58040879591855,2.57545848628462,0,0,0,0,1.84780341018745,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19040304263846,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,1.65284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0077309914171,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.83654246567162,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0.632994193584081,3.10142335502381,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,1.90915712168644,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,6.84429839571811,0.160317640503067,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,1.19807400299395,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,9.7652999984036,21.6028975775176,0,0,0,3.01891218839339,0.788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0.80057074828547,0.352675943690684,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,3.82882366312754,0,0,0,1.53314913167514,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0.22910686854405,0,0,2.34896406775364,0,0,0,0,0,0,2.33939463462106,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0,0,0,0,0,0,0,0,0,0,0,1.42838658878244,0,0,0,0,0,0,3.08009970976753,0,0,0,0,0,0,0,0,0.244482888365733,1.62758471326295,0.665756774185513,0,0 | ||
|short_description=p@chr15:56365882..56365895,+ | |short_description=p@chr15:56365882..56365895,+ | ||
}} | }} |
Revision as of 21:19, 18 November 2012
Short description: | p@chr15:56365882..56365895, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:56365882..56365895, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.30e-31 | 5 |
seromucus secreting cell | 5.20e-13 | 2 |
gingival epithelial cell | 7.60e-09 | 3 |
serous secreting cell | 1.51e-07 | 1 |
perirenal preadipocyte | 3.01e-07 | 1 |
mucus secreting cell | 3.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 7.60e-09 | 3 |
epithelium of female gonad | 1.51e-07 | 1 |
epithelium of mucosa | 2.57e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.61e-14 | 4 |
breast cancer | 3.61e-14 | 4 |
adenocarcinoma | 4.43e-11 | 25 |
skin squamous cell carcinoma | 1.18e-07 | 1 |
keratoacanthoma | 1.18e-07 | 1 |
ovary epithelial cancer | 1.51e-07 | 1 |
mucinous adenocarcinoma | 3.84e-07 | 1 |
vascular disease | 4.09e-07 | 1 |
ischemia | 4.09e-07 | 1 |
extrinsic cardiomyopathy | 4.09e-07 | 1 |
myocardial ischemia | 4.09e-07 | 1 |
myocardial infarction | 4.09e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.