FFCP PHASE1:Hg19::chr2:241397690..241397720,+: Difference between revisions
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|ontology_enrichment_celltype_v019_2=CL:0000349,1.47e-26,19;CL:0002537,8.97e-20,5;CL:0002541,5.30e-15,3;CL:0000039,2.65e-14,7;CL:0000586,2.65e-14,7 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.93e-12;1!UBERON:0003124;1.32e-11;1 | |ontology_enrichment_development_v019=UBERON:0000358;5.93e-12;1!UBERON:0003124;1.32e-11;1 | ||
|ontology_enrichment_disease=DOID:305!1.96e-08!106;DOID:0050687!2.14e-07!143 | |ontology_enrichment_disease=DOID:305!1.96e-08!106;DOID:0050687!2.14e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:178;4.53e-12;1!DOID:326;4.53e-12;1!DOID:3978;4.53e-12;1!DOID:3394;4.53e-12;1!DOID:5844;4.53e-12;1!DOID:1799;8.64e-12;1!DOID:10165;8.64e-12;1!DOID:1798;8.64e-12;1 | |ontology_enrichment_disease_v019=DOID:178;4.53e-12;1!DOID:326;4.53e-12;1!DOID:3978;4.53e-12;1!DOID:3394;4.53e-12;1!DOID:5844;4.53e-12;1!DOID:1799;8.64e-12;1!DOID:10165;8.64e-12;1!DOID:1798;8.64e-12;1 | ||
|ontology_enrichment_disease_v019_2=DOID:178,4.53e-12,1;DOID:326,4.53e-12,1;DOID:3978,4.53e-12,1;DOID:3394,4.53e-12,1;DOID:5844,4.53e-12,1;DOID:1799,8.64e-12,1;DOID:10165,8.64e-12,1;DOID:1798,8.64e-12,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;2.00e-37;10!UBERON:0000158;2.00e-37;10!UBERON:0000478;2.63e-34;24!UBERON:0000305;2.54e-24;7!UBERON:0003124;4.93e-15;3!UBERON:0000920;4.93e-15;3!UBERON:0001987;1.55e-11;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;2.00e-37;10!UBERON:0000158;2.00e-37;10!UBERON:0000478;2.63e-34;24!UBERON:0000305;2.54e-24;7!UBERON:0003124;4.93e-15;3!UBERON:0000920;4.93e-15;3!UBERON:0001987;1.55e-11;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.33e-47,14;UBERON:0000158,5.33e-47,14;UBERON:0000478,2.74e-34,24;UBERON:0000305,2.62e-24,7;UBERON:0003124,2.62e-24,7;UBERON:0004871,2.59e-21,8;UBERON:0000920,5.30e-15,3;UBERON:0001987,1.55e-11,4;UBERON:0004340,1.55e-11,4;UBERON:0004923,2.74e-09,66;UBERON:0000995,2.96e-08,21;UBERON:0005795,6.91e-08,22;UBERON:0003975,6.91e-08,22;UBERON:0004175,5.87e-07,25 | |||
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| ||
|short_description=p16@GPC1 | |short_description=p16@GPC1 | ||
}} | }} |
Revision as of 23:17, 18 November 2012
Short description: | p16@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_GPC1_5end |
Coexpression cluster: | C4209_amniotic_endometrioid_Placental_pancreatic_chorionic_heart_placenta |
Association with transcript: | 86bp_to_ENST00000495100_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.47e-26 | 19 |
amnion mesenchymal stem cell | 8.97e-20 | 5 |
chorionic membrane mesenchymal stem cell | 5.30e-15 | 3 |
germ line cell | 2.65e-14 | 7 |
germ cell | 2.65e-14 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.33e-47 | 14 |
membranous layer | 5.33e-47 | 14 |
extraembryonic structure | 2.74e-34 | 24 |
amnion | 2.62e-24 | 7 |
chorion | 2.62e-24 | 7 |
somatic layer of lateral plate mesoderm | 2.59e-21 | 8 |
egg chorion | 5.30e-15 | 3 |
placenta | 1.55e-11 | 4 |
allantois | 1.55e-11 | 4 |
organ component layer | 2.74e-09 | 66 |
uterus | 2.96e-08 | 21 |
embryonic uterus | 6.91e-08 | 22 |
internal female genitalia | 6.91e-08 | 22 |
internal genitalia | 5.87e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.53e-12 | 1 |
ischemia | 4.53e-12 | 1 |
extrinsic cardiomyopathy | 4.53e-12 | 1 |
myocardial ischemia | 4.53e-12 | 1 |
myocardial infarction | 4.53e-12 | 1 |
islet cell tumor | 8.64e-12 | 1 |
endocrine pancreas cancer | 8.64e-12 | 1 |
pancreatic endocrine carcinoma | 8.64e-12 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.