FFCP PHASE1:Hg19::chr2:200322654..200322707,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!7.97e-25!180;CL:0000057!1.70e-12!75;CL:0002620!1.64e-09!23;CL:0002319!2.46e-07!25;CL:0000062!6.00e-07!11;CL:0000375!6.00e-07!11;CL:0000335!6.00e-07!11 | |ontology_enrichment_celltype=CL:0000055!7.97e-25!180;CL:0000057!1.70e-12!75;CL:0002620!1.64e-09!23;CL:0002319!2.46e-07!25;CL:0000062!6.00e-07!11;CL:0000375!6.00e-07!11;CL:0000335!6.00e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.86e-11;23!CL:0000062;4.90e-07;9 | |ontology_enrichment_celltype_v019=CL:0002620;3.86e-11;23!CL:0000062;4.90e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.35e-12,76;CL:0002620,4.21e-11,23;CL:0000062,2.75e-08,11;CL:0000375,2.75e-08,11;CL:0000335,2.75e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.76e-08;11 | |ontology_enrichment_development_v019=CL:0000335;1.76e-08;11 | ||
|ontology_enrichment_disease=DOID:14566!4.80e-08!239;DOID:162!5.35e-07!235 | |ontology_enrichment_disease=DOID:14566!4.80e-08!239;DOID:162!5.35e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.99e-13!365;UBERON:0002097!1.68e-10!40;UBERON:0002199!3.09e-10!45;UBERON:0002416!3.09e-10!45;UBERON:0000914!6.31e-10!83;UBERON:0002329!6.31e-10!83;UBERON:0003077!6.31e-10!83;UBERON:0003059!6.31e-10!83;UBERON:0007282!6.31e-10!83;UBERON:0009618!6.31e-10!83;UBERON:0007285!6.31e-10!83;UBERON:0003102!2.25e-09!95;UBERON:0000956!1.02e-08!25;UBERON:0000203!1.02e-08!25;UBERON:0004290!2.08e-08!70;UBERON:0001950!3.45e-08!20;UBERON:0002619!4.34e-08!22;UBERON:0000486!2.29e-07!82;UBERON:0001869!6.70e-07!32;UBERON:0004121!8.04e-07!169 | |ontology_enrichment_uberon=UBERON:0000475!1.99e-13!365;UBERON:0002097!1.68e-10!40;UBERON:0002199!3.09e-10!45;UBERON:0002416!3.09e-10!45;UBERON:0000914!6.31e-10!83;UBERON:0002329!6.31e-10!83;UBERON:0003077!6.31e-10!83;UBERON:0003059!6.31e-10!83;UBERON:0007282!6.31e-10!83;UBERON:0009618!6.31e-10!83;UBERON:0007285!6.31e-10!83;UBERON:0003102!2.25e-09!95;UBERON:0000956!1.02e-08!25;UBERON:0000203!1.02e-08!25;UBERON:0004290!2.08e-08!70;UBERON:0001950!3.45e-08!20;UBERON:0002619!4.34e-08!22;UBERON:0000486!2.29e-07!82;UBERON:0001869!6.70e-07!32;UBERON:0004121!8.04e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.29e-09;25!UBERON:0000203;1.29e-09;25!UBERON:0001950;1.65e-09;20!UBERON:0002619;8.16e-09;22!UBERON:0001474;1.49e-08;18!UBERON:0002097;1.66e-08;41!UBERON:0001434;2.12e-08;36!UBERON:0003129;4.02e-07;7!UBERON:0002199;7.71e-07;46!UBERON:0002416;7.71e-07;46!UBERON:0001869;9.17e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000956;1.29e-09;25!UBERON:0000203;1.29e-09;25!UBERON:0001950;1.65e-09;20!UBERON:0002619;8.16e-09;22!UBERON:0001474;1.49e-08;18!UBERON:0002097;1.66e-08;41!UBERON:0001434;2.12e-08;36!UBERON:0003129;4.02e-07;7!UBERON:0002199;7.71e-07;46!UBERON:0002416;7.71e-07;46!UBERON:0001869;9.17e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,5.57e-11,41;UBERON:0002199,1.31e-10,46;UBERON:0002416,1.31e-10,46;UBERON:0000956,1.07e-09,25;UBERON:0000203,1.07e-09,25;UBERON:0001950,1.30e-09,20;UBERON:0007524,2.89e-09,73;UBERON:0002619,6.64e-09,22;UBERON:0003077,9.33e-09,72;UBERON:0007285,9.33e-09,72;UBERON:0003102,1.39e-08,99;UBERON:0002329,2.34e-08,71;UBERON:0003059,2.34e-08,71;UBERON:0007282,2.34e-08,71;UBERON:0004290,2.34e-08,71;UBERON:0009618,2.34e-08,71;UBERON:0000486,1.25e-07,83;UBERON:0001869,1.68e-07,32;UBERON:0003129,4.31e-07,7;UBERON:0007503,9.50e-07,78 | |||
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| ||
|short_description=p2@SATB2 | |short_description=p2@SATB2 | ||
}} | }} | ||
Revision as of 00:24, 21 November 2012
| Short description: | p2@SATB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_SATB2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 111bp_to_ENST00000417098, NM_001172509, uc002uuy.1_5end |
| EntrezGene: | SATB2 |
| HGNC: | 21637 |
| UniProt: | Q9UPW6B3KPQ9 |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 1.35e-12 | 76 |
| skin fibroblast | 4.21e-11 | 23 |
| osteoblast | 2.75e-08 | 11 |
| osteoprogenitor cell | 2.75e-08 | 11 |
| mesenchyme condensation cell | 2.75e-08 | 11 |
| Ontology term | p-value | n |
|---|---|---|
| skin of body | 5.57e-11 | 41 |
| integument | 1.31e-10 | 46 |
| integumental system | 1.31e-10 | 46 |
| cerebral cortex | 1.07e-09 | 25 |
| pallium | 1.07e-09 | 25 |
| neocortex | 1.30e-09 | 20 |
| dense mesenchyme tissue | 2.89e-09 | 73 |
| regional part of cerebral cortex | 6.64e-09 | 22 |
| paraxial mesoderm | 9.33e-09 | 72 |
| presumptive paraxial mesoderm | 9.33e-09 | 72 |
| surface structure | 1.39e-08 | 99 |
| somite | 2.34e-08 | 71 |
| presomitic mesoderm | 2.34e-08 | 71 |
| presumptive segmental plate | 2.34e-08 | 71 |
| dermomyotome | 2.34e-08 | 71 |
| trunk paraxial mesoderm | 2.34e-08 | 71 |
| multilaminar epithelium | 1.25e-07 | 83 |
| cerebral hemisphere | 1.68e-07 | 32 |
| skull | 4.31e-07 | 7 |
| epithelial vesicle | 9.50e-07 | 78 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
