FFCP PHASE1:Hg19::chr17:75446774..75446783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=S | |||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=161bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |association_with_transcript=161bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | ||
Revision as of 13:11, 8 July 2013
| Short description: | p49@SEPT9 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_49_at_SEPT9_5end |
| Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
| Association with transcript: | 161bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
| EntrezGene: | SEPT9 |
| HGNC: | 7323 |
| UniProt: | Q9UHD8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p49@SEPT9 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pericyte cell | 8.56e-26 | 4 |
| central nervous system pericyte | 6.38e-24 | 2 |
| fibroblast of choroid plexus | 1.42e-23 | 2 |
| smooth muscle cell of the pulmonary artery | 3.45e-12 | 1 |
| hepatocyte | 6.51e-09 | 12 |
| Ontology term | p-value | n |
|---|---|---|
| vascular plexus | 1.42e-23 | 2 |
| ventricle of nervous system | 1.42e-23 | 2 |
| choroid plexus | 1.42e-23 | 2 |
| brain ventricle | 1.42e-23 | 2 |
| ventricular system of brain | 1.42e-23 | 2 |
| ventricular system of central nervous system | 1.42e-23 | 2 |
| brain vasculature | 5.20e-10 | 5 |
| liver | 1.36e-09 | 19 |
| digestive gland | 1.36e-09 | 19 |
| liver bud | 1.36e-09 | 19 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
