FFCP PHASE1:Hg19::chr10:112327528..112327539,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9126|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2468|TSSclassifier=S|UniProt=Q9UQE7|association_with_transcript=79bp_to_ENST00000361804,NM_005445,uc001kze.2_5end|description=CAGE_peak_2_at_SMC3_5end|id=chr10:112327528..112327539,+|ontology_enrichment_celltype=CL:0000542!2.83e-13!53;CL:0000051!2.83e-13!53;CL:0000838!9.60e-13!52;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172;CL:0000945!5.39e-07!24;CL:0000826!5.39e-07!24|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000542,7.73e-13,53;CL:0000051,7.73e-13,53;CL:0000838,5.05e-12,52;CL:0002322,2.88e-07,5;CL:0000039,5.58e-07,7;CL:0000586,5.58e-07,7;CL:0000037,8.11e-07,168|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!8.71e-17!239;DOID:162!8.85e-17!235;DOID:0050687!4.81e-13!143;DOID:305!7.85e-11!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,6.87e-07,235;DOID:14566,8.06e-07,239|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0,0,0.286235987131057,0.547497700291537,0.502170558379211,1.75750833220288,1.06730766284929,2.44003422072406,0.786728553697808,0.767658796194425,0.464448369948228,0,0,0.369754010166788,4.10576163075599,4.40724620711007,1.17440175733939,0.553995408531877,0.401088894940283,0.434021741431704,0.447830948479849,0.647787332037959,0.257575567634187,0.290796477559129,1.13362783106643,0,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0,1.35426486594342,0.376484679085209,0.272906150057846,0.449446968890169,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0.546138611262131,0.889509253863555,0.853460445133014,0,0.574752439954483,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,2.29363936875137,1.32171328579026,2.24203425192614,1.31692042387539,2.55722701147983,2.35806457649499,1.85041349099558,1.33749196312542,0.32592226663359,1.89379122293893,0,1.22551502573691,2.06224135232386,1.99380505125259,2.70803863765016,1.79327847615945,1.1705341280389,0.493313713811028,0.276350017785848,1.73881851441031,0.889719378972363,0,1.04535523804977,1.92625882585863,0,0.68725489096526,2.53019692019503,0.95569624297229,0.651083453856419,0,0.903450714466637,1.79181255616186,0,1.65744076430812,0.821127996921047,0.80642697289893,2.67440195783507,1.30341963494519,0,0,0.255725123687061,0.361439152384566,0,0,0.795285947051099,0,1.41802225746102,0.221729397462564,0.527008714158756,0.130979075497713,0,0,0,0.522389211897802,0.531831842075461,2.38490624305342,2.85997455390064,2.60020250930695,0,0,0,0,0,0.275118041940067,0,0.516833518338658,1.42306505074684,1.33888245105868,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0.570471821544449,0.298897361103602,0.23486899728753,0.161872944368132,0.140450806702248,0,0.368502951935304,0.206651562351531,0,0,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0.877955241761676,0,0,0.113432183160021,0.89694817844431,0,0,0.300091096084402,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,0.779496041289589,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0.272746120590835,0.286804595389004,3.41526377162867,2.78312513475119,1.85910308591229,1.45125477021519,1.7662459561294,2.18986415445498,0,0,0,0,0,0.473227200159376,1.34867752062481,0.723033089650446,0.882351781859152,1.30727666455444,1.42362371466658,0.404493924480493,0.588664395376038,1.15424147083917,0,0,0,0,0,2.94848165003288,1.18157981336281,0.441463099414651,0.983907508344908,0.343135620597051,0.109750285408626,0,0,0.185176890317059,0,0,0,0.811512834825538,0,0.288732895522148,0,0.380508304469197,0,0,0.492434012174795,1.8720341211139,0.445893486866185,0,0,0.141775097242386,0.53735113621709,0,0.383382679165211,1.97065295158377,1.32072651019839,0.207328115540772,0.720599767084807,0.50496973370552,1.14296209725904,0,0,0,0.411309970813294,2.10240140490742,0.857479297891735,0.112131084345361,0.87192013766656,1.0267360014933,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.723906533337896,0.205476322550383,0.358121926479791,1.2329365839288,2.1673383622212,1.72502059887614,1.92514554419623,0.76228387266739,3.90419561572865,0,0.335032530668698,1.27587750330633,1.49801404789436,0,1.24324654030811,0.24538298343828,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,1.03384013061444,1.2942852049117,1.06727557803444,0,0,0.30239029332968,0,0.153461973288062,0,0.256278298511402,0,0,0,0.462629081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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9126 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2468 | |||
|TSSclassifier=S | |||
|UniProt=Q9UQE7 | |||
|association_with_transcript=79bp_to_ENST00000361804,NM_005445,uc001kze.2_5end | |||
|description=CAGE_peak_2_at_SMC3_5end | |||
|id=chr10:112327528..112327539,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.83e-13!53;CL:0000051!2.83e-13!53;CL:0000838!9.60e-13!52;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172;CL:0000945!5.39e-07!24;CL:0000826!5.39e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.73e-13,53;CL:0000051,7.73e-13,53;CL:0000838,5.05e-12,52;CL:0002322,2.88e-07,5;CL:0000039,5.58e-07,7;CL:0000586,5.58e-07,7;CL:0000037,8.11e-07,168 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.71e-17!239;DOID:162!8.85e-17!235;DOID:0050687!4.81e-13!143;DOID:305!7.85e-11!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.87e-07,235;DOID:14566,8.06e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SMC3 | |||
}} |
Revision as of 11:44, 10 September 2013
Short description: | p2@SMC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SMC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_ENST00000361804, NM_005445, uc001kze.2_5end |
EntrezGene: | SMC3 |
HGNC: | 2468 |
UniProt: | Q9UQE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.73e-13 | 53 |
common lymphoid progenitor | 7.73e-13 | 53 |
lymphoid lineage restricted progenitor cell | 5.05e-12 | 52 |
embryonic stem cell | 2.88e-07 | 5 |
germ line cell | 5.58e-07 | 7 |
germ cell | 5.58e-07 | 7 |
hematopoietic stem cell | 8.11e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.87e-07 | 235 |
disease of cellular proliferation | 8.06e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.