FFCP PHASE1:Hg19::chr10:63855378..63855383,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:63855378..63855383,+|id=chr10:63855378..63855383,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000153;3.23e-10;9!CL:0000447;3.23e-10;9!CL:0000138;4.50e-09;6!CL:0000499;5.17e-09;28!CL:0000135;1.30e-08;3!CL:0000388;1.30e-08;3!CL:0002616;2.09e-07;1!CL:0000313;2.65e-07;1!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002581;7.34e-07;1!CL:0000216;7.34e-07;1!CL:0002591;7.34e-07;1|ontology_enrichment_celltype_v019_2=CL:0000153,2.34e-10,9;CL:0000447,2.34e-10,9;CL:0000499,3.50e-09,28;CL:0000058,4.27e-09,6;CL:0000138,4.27e-09,6;CL:0000135,8.09e-09,3;CL:0000388,8.09e-09,3;CL:0002616,2.09e-07,1;CL:0000313,2.50e-07,1;CL:0000511,4.25e-07,1;CL:0002625,4.25e-07,1;CL:0000216,4.25e-07,1;CL:0002581,5.37e-07,1;CL:0002591,8.02e-07,1|ontology_enrichment_development_v019=UBERON:0000358;2.65e-07;1!UBERON:0003099;2.65e-07;1!UBERON:0003852;2.65e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.50e-08;3!DOID:127;2.50e-08;3!DOID:2152;2.65e-07;1!DOID:2513;7.34e-07;1|ontology_enrichment_disease_v019_2=DOID:0060084,1.93e-08,3;DOID:127,1.93e-08,3;DOID:2152,2.50e-07,1;DOID:2513,4.78e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005406;1.36e-12;2!UBERON:0004909;1.71e-12;2!UBERON:0007846;1.30e-08;3!UBERON:0000043;1.30e-08;3!UBERON:0007845;1.30e-08;3!UBERON:0004911;2.65e-07;1!UBERON:0005705;2.65e-07;1!UBERON:0008193;2.65e-07;1!UBERON:0010912;2.65e-07;1!UBERON:0002514;2.65e-07;1!UBERON:0003457;2.65e-07;1!UBERON:0008907;2.65e-07;1!UBERON:0008001;2.65e-07;1!UBERON:0007213;2.65e-07;1!UBERON:0009891;2.65e-07;1!UBERON:0007914;2.65e-07;1!UBERON:0007375;2.65e-07;1!UBERON:0003323;2.65e-07;1!UBERON:0010258;2.65e-07;1!UBERON:0005253;2.65e-07;1!UBERON:0007842;2.65e-07;1!UBERON:0002397;2.65e-07;1!UBERON:0003113;2.65e-07;1!UBERON:0003277;2.65e-07;1!UBERON:0001709;2.65e-07;1!UBERON:0002244;2.65e-07;1!UBERON:0005620;2.65e-07;1!UBERON:0010364;2.65e-07;1!UBERON:0004288;2.65e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004909,9.39e-13,2;UBERON:0005406,9.95e-13,2;UBERON:0007846,8.09e-09,3;UBERON:0000043,8.09e-09,3;UBERON:0007845,8.09e-09,3;UBERON:0005705,2.22e-07,1;UBERON:0008193,2.22e-07,1;UBERON:0010912,2.22e-07,1;UBERON:0002514,2.22e-07,1;UBERON:0003457,2.22e-07,1;UBERON:0008907,2.22e-07,1;UBERON:0008001,2.22e-07,1;UBERON:0007213,2.22e-07,1;UBERON:0009891,2.22e-07,1;UBERON:0007914,2.22e-07,1;UBERON:0009292,2.22e-07,1;UBERON:0003099,2.22e-07,1;UBERON:0007375,2.22e-07,1;UBERON:0003323,2.22e-07,1;UBERON:0010258,2.22e-07,1;UBERON:0007842,2.22e-07,1;UBERON:0009494,2.22e-07,1;UBERON:0010042,2.22e-07,1;UBERON:0010045,2.22e-07,1;UBERON:0010259,2.22e-07,1;UBERON:0010359,2.22e-07,1;UBERON:0009526,2.22e-07,1;UBERON:0002397,2.22e-07,1;UBERON:0003113,2.22e-07,1;UBERON:0003277,2.22e-07,1;UBERON:0001709,2.22e-07,1;UBERON:0004066,2.22e-07,1;UBERON:0002244,2.22e-07,1;UBERON:0005620,2.22e-07,1;UBERON:0004362,2.22e-07,1;UBERON:0010364,2.22e-07,1;UBERON:0010046,2.22e-07,1;UBERON:0005868,2.22e-07,1;UBERON:0007238,2.22e-07,1;UBERON:0004288,2.22e-07,1;UBERON:0004068,2.22e-07,1;UBERON:0010334,2.22e-07,1;UBERON:0003852,2.22e-07,1;UBERON:0010253,2.22e-07,1;UBERON:0004911,2.50e-07,1;UBERON:0001136,4.25e-07,1;UBERON:0001343,4.25e-07,1;UBERON:0004910,4.25e-07,1;UBERON:0005154,4.25e-07,1;UBERON:0005295,4.25e-07,1;UBERON:0004813,4.25e-07,1;UBERON:0005297,4.25e-07,1;UBERON:0005294,4.25e-07,1;UBERON:0010141,4.25e-07,1;UBERON:0005891,4.25e-07,1|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0.822405995998037,0.167186495390678,0,0,0,0.111410456885174,1.17842362989935,0.886135578334485,0.812411591295047,0.384273959177026,0.520237390239513,0.657751618414705,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.0843174571537,1.50401373190767,2.75208386025565,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0,1.06400514659507,1.68203280042692,1.06748995729705,0,0,0,0,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0,0,0,0,0|short_description=p@chr10:63855378..63855383,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:63855378..63855383,+ | |||
|id=chr10:63855378..63855383,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.23e-10;9!CL:0000447;3.23e-10;9!CL:0000138;4.50e-09;6!CL:0000499;5.17e-09;28!CL:0000135;1.30e-08;3!CL:0000388;1.30e-08;3!CL:0002616;2.09e-07;1!CL:0000313;2.65e-07;1!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002581;7.34e-07;1!CL:0000216;7.34e-07;1!CL:0002591;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.34e-10,9;CL:0000447,2.34e-10,9;CL:0000499,3.50e-09,28;CL:0000058,4.27e-09,6;CL:0000138,4.27e-09,6;CL:0000135,8.09e-09,3;CL:0000388,8.09e-09,3;CL:0002616,2.09e-07,1;CL:0000313,2.50e-07,1;CL:0000511,4.25e-07,1;CL:0002625,4.25e-07,1;CL:0000216,4.25e-07,1;CL:0002581,5.37e-07,1;CL:0002591,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.65e-07;1!UBERON:0003099;2.65e-07;1!UBERON:0003852;2.65e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.50e-08;3!DOID:127;2.50e-08;3!DOID:2152;2.65e-07;1!DOID:2513;7.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.93e-08,3;DOID:127,1.93e-08,3;DOID:2152,2.50e-07,1;DOID:2513,4.78e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.36e-12;2!UBERON:0004909;1.71e-12;2!UBERON:0007846;1.30e-08;3!UBERON:0000043;1.30e-08;3!UBERON:0007845;1.30e-08;3!UBERON:0004911;2.65e-07;1!UBERON:0005705;2.65e-07;1!UBERON:0008193;2.65e-07;1!UBERON:0010912;2.65e-07;1!UBERON:0002514;2.65e-07;1!UBERON:0003457;2.65e-07;1!UBERON:0008907;2.65e-07;1!UBERON:0008001;2.65e-07;1!UBERON:0007213;2.65e-07;1!UBERON:0009891;2.65e-07;1!UBERON:0007914;2.65e-07;1!UBERON:0007375;2.65e-07;1!UBERON:0003323;2.65e-07;1!UBERON:0010258;2.65e-07;1!UBERON:0005253;2.65e-07;1!UBERON:0007842;2.65e-07;1!UBERON:0002397;2.65e-07;1!UBERON:0003113;2.65e-07;1!UBERON:0003277;2.65e-07;1!UBERON:0001709;2.65e-07;1!UBERON:0002244;2.65e-07;1!UBERON:0005620;2.65e-07;1!UBERON:0010364;2.65e-07;1!UBERON:0004288;2.65e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,9.39e-13,2;UBERON:0005406,9.95e-13,2;UBERON:0007846,8.09e-09,3;UBERON:0000043,8.09e-09,3;UBERON:0007845,8.09e-09,3;UBERON:0005705,2.22e-07,1;UBERON:0008193,2.22e-07,1;UBERON:0010912,2.22e-07,1;UBERON:0002514,2.22e-07,1;UBERON:0003457,2.22e-07,1;UBERON:0008907,2.22e-07,1;UBERON:0008001,2.22e-07,1;UBERON:0007213,2.22e-07,1;UBERON:0009891,2.22e-07,1;UBERON:0007914,2.22e-07,1;UBERON:0009292,2.22e-07,1;UBERON:0003099,2.22e-07,1;UBERON:0007375,2.22e-07,1;UBERON:0003323,2.22e-07,1;UBERON:0010258,2.22e-07,1;UBERON:0007842,2.22e-07,1;UBERON:0009494,2.22e-07,1;UBERON:0010042,2.22e-07,1;UBERON:0010045,2.22e-07,1;UBERON:0010259,2.22e-07,1;UBERON:0010359,2.22e-07,1;UBERON:0009526,2.22e-07,1;UBERON:0002397,2.22e-07,1;UBERON:0003113,2.22e-07,1;UBERON:0003277,2.22e-07,1;UBERON:0001709,2.22e-07,1;UBERON:0004066,2.22e-07,1;UBERON:0002244,2.22e-07,1;UBERON:0005620,2.22e-07,1;UBERON:0004362,2.22e-07,1;UBERON:0010364,2.22e-07,1;UBERON:0010046,2.22e-07,1;UBERON:0005868,2.22e-07,1;UBERON:0007238,2.22e-07,1;UBERON:0004288,2.22e-07,1;UBERON:0004068,2.22e-07,1;UBERON:0010334,2.22e-07,1;UBERON:0003852,2.22e-07,1;UBERON:0010253,2.22e-07,1;UBERON:0004911,2.50e-07,1;UBERON:0001136,4.25e-07,1;UBERON:0001343,4.25e-07,1;UBERON:0004910,4.25e-07,1;UBERON:0005154,4.25e-07,1;UBERON:0005295,4.25e-07,1;UBERON:0004813,4.25e-07,1;UBERON:0005297,4.25e-07,1;UBERON:0005294,4.25e-07,1;UBERON:0010141,4.25e-07,1;UBERON:0005891,4.25e-07,1 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.140954404095971,1.0007329835313,0.893922188854576,3.48935409640147,0,0,0.522371256399677,0,0,0,0,0.495065411840187,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.39783335439818,0.182664153764634,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0.822405995998037,0.167186495390678,0,0,0,0.111410456885174,1.17842362989935,0.886135578334485,0.812411591295047,0.384273959177026,0.520237390239513,0.657751618414705,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0.766440987203842,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,1.0843174571537,1.50401373190767,2.75208386025565,0,0,0.189069634328136,0,0.175669571386252,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0,1.06400514659507,1.68203280042692,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408308342509787,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.45071417671979,0.226864366320042,0,1.06778694409284,0.847727604638247,0.600182192168805,0.103052529238439,0.257640540045629,0.558350568994769,0,0.194874010322397,0.252433774244115,0.552299391853796,1.13152239773168,0,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16563844500876,0,0.168584690078102,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.433099343283221,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0,0,0.623912584592421,2.14114786556594,0.473107245101804,0.117141414992713,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.496215615637554,0,1.12264037773229,0.128139149255701,0.511707249066704,1.12597744800525,1.48418066444991,0.308419387605311,0,0.246381468041427,0,0,0.362578348774867,0,0,0.68888668898764,0.364182336013434,1.31124414959424,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0.580066775656914,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,1.116475108079,0,0,0,0,0,0,0.539617372749944,0.274537029736055,0.589062011728432,0,1.58510321173008,0,0,0,0,0.409499734223957,0.989838023675989,1.13008116620243,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0.35667105148125,0,1.68886108238131,0.987884678879706,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0.16480387422676,1.05562704063997,0.597743964753209,0,0,0.306806047506464,0,1.55519793830904,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0.227884111694002,0,0,0.108647371922008,1.27600463892768,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0,0,0.176915129006678,0,0.296521128680622,0,0,0.067401132980677,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0.458146384663663,0.171594997861965,0,0,0.235694034616795,0,0.523014231561666,0.509991088181609,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.13480708770837,0.393709926058995,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.104909176269996,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0.653174720218818,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0,0,1.25783950876288,0.889811221596536,0,0.453692771289717,0.15543720058278,0.147855149989634,0.477890301491107,0,0.465788870628778,0,0.797525143673985,0,0.300515217994437,0.38080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| |||
|short_description=p@chr10:63855378..63855383,+ | |||
}} |
Revision as of 13:54, 10 September 2013
Short description: | p@chr10:63855378..63855383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:63855378..63855383, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.34e-10 | 9 |
carbohydrate secreting cell | 2.34e-10 | 9 |
stromal cell | 3.50e-09 | 28 |
chondroblast | 4.27e-09 | 6 |
chondrocyte | 4.27e-09 | 6 |
fibrocyte | 8.09e-09 | 3 |
tendon cell | 8.09e-09 | 3 |
perirenal adipocyte cell | 2.09e-07 | 1 |
serous secreting cell | 2.50e-07 | 1 |
androgen binding protein secreting cell | 4.25e-07 | 1 |
seminiferous tubule epithelial cell | 4.25e-07 | 1 |
Sertoli cell | 4.25e-07 | 1 |
perirenal preadipocyte | 5.37e-07 | 1 |
smooth muscle cell of the pulmonary artery | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.93e-08 | 3 |
leiomyoma | 1.93e-08 | 3 |
ovary epithelial cancer | 2.50e-07 | 1 |
basal cell carcinoma | 4.78e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.