FFCP PHASE1:Hg19::chr10:64028390..64028399,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=219790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19364|TSSclassifier=S|UniProt=Q8IZC4|association_with_transcript=66bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end|description=CAGE_peak_9_at_RTKN2_5end|id=chr10:64028390..64028399,-|ontology_enrichment_celltype=CL:0000133!2.83e-09!59;CL:0000221!3.10e-07!71;CL:0002322!8.64e-07!5|ontology_enrichment_celltype_v019=CL:0000228;2.05e-29;1!CL:0002372;2.05e-29;1!CL:0000056;2.18e-08;4!CL:0000737;2.18e-08;4|ontology_enrichment_celltype_v019_2=CL:0000228,1.78e-29,1;CL:0002372,1.78e-29,1;CL:0000737,2.11e-08,4;CL:0000515,2.11e-08,4|ontology_enrichment_development_v019=CL:0000515;2.18e-08;4|ontology_enrichment_disease=DOID:162!1.65e-15!235;DOID:14566!1.04e-14!239;DOID:0050687!2.10e-11!143;DOID:305!6.42e-10!106;DOID:3095!2.75e-07!22;DOID:2994!2.75e-07!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000013!1.18e-07!5;UBERON:0002410!1.18e-07!5|ontology_enrichment_uberon_v019=UBERON:0001052;2.18e-08;4!UBERON:0004907;5.86e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.82e-08,4;UBERON:0004907,5.08e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0.865615277858669,1.06712765022621,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0,0,0,0.270455678475983,0.99921590399346,0,0.18714054040822,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0.409074730008619,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0,0.689486746482929,0,0.868124974666461,0,0,0,0,0,0,0.21787692703798,0.557694977114413,0,0.113942055847001,0,0.269272933229316,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.329663433524666,0.202210631562555,0,0,0,0,0.160753148465019,0.412618309791701,1.66176135211674,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0.192619830407303,0.643324774124777,0,0.453411851024545,0.694567422971502,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.646948868380091,0.471797825567689,0.218419276384028,0,0,0,0.558644917973244,0,2.28699060503635,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19364 | |||
|TSSclassifier=S | |||
|UniProt=Q8IZC4 | |||
|association_with_transcript=66bp_to_ENST00000373789,ENST00000395260,ENST00000395265,NM_145307,uc001jlw.2,uc001jlx.2_5end | |||
|description=CAGE_peak_9_at_RTKN2_5end | |||
|id=chr10:64028390..64028399,- | |||
|ontology_enrichment_celltype=CL:0000133!2.83e-09!59;CL:0000221!3.10e-07!71;CL:0002322!8.64e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000228;2.05e-29;1!CL:0002372;2.05e-29;1!CL:0000056;2.18e-08;4!CL:0000737;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,1.78e-29,1;CL:0002372,1.78e-29,1;CL:0000737,2.11e-08,4;CL:0000515,2.11e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000515;2.18e-08;4 | |||
|ontology_enrichment_disease=DOID:162!1.65e-15!235;DOID:14566!1.04e-14!239;DOID:0050687!2.10e-11!143;DOID:305!6.42e-10!106;DOID:3095!2.75e-07!22;DOID:2994!2.75e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000013!1.18e-07!5;UBERON:0002410!1.18e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.18e-08;4!UBERON:0004907;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.82e-08,4;UBERON:0004907,5.08e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0,0,0.286235987131057,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0.154934401160603,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.164254312027618,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0.865615277858669,1.06712765022621,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0,0,0,0.270455678475983,0.99921590399346,0,0.18714054040822,0,0,0.222886768554957,0,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0,0.251932747854276,0.409074730008619,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0,0,0.689486746482929,0,0.868124974666461,0,0,0,0,0,0,0.21787692703798,0.557694977114413,0,0.113942055847001,0,0.269272933229316,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.329663433524666,0.202210631562555,0,0,0,0,0.160753148465019,0.412618309791701,1.66176135211674,0,0,0,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0.192619830407303,0.643324774124777,0,0.453411851024545,0.694567422971502,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.383683113910955,0.646948868380091,0.471797825567689,0.218419276384028,0,0,0,0.558644917973244,0,2.28699060503635,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.444925607568277,0.078493092850514,0,0.280272163313789,1.82631744101899,0.215927591218621,0,0,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.294450700845729,0,0,0,0,0,0.233939463462106,0,0.118920090777569,0.5647304101948,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0,0.432626562123789,0.504665699340316,0.109265571963696,0.380095503034311,0.305966489225945,0,0.0918948995348449,0.250707539292375,0,0,0,0,0,0.476128862927481,0,0.186224142887574,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@RTKN2 | |||
}} |
Revision as of 13:54, 10 September 2013
Short description: | p9@RTKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RTKN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_ENST00000373789, ENST00000395260, ENST00000395265, NM_145307, uc001jlw.2, uc001jlx.2_5end |
EntrezGene: | RTKN2 |
HGNC: | 19364 |
UniProt: | Q8IZC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 1.78e-29 | 1 |
myotube | 1.78e-29 | 1 |
striated muscle cell | 2.11e-08 | 4 |
skeletal muscle myoblast | 2.11e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.82e-08 | 4 |
lower digestive tract | 5.08e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.