FFCP PHASE1:Hg19::chr10:98319846..98319847,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-94bp_to_ENST00000426339_5end|description=CAGE_peak_1_at_ENST00000426339_5end|id=chr10:98319846..98319847,+|ontology_enrichment_celltype=CL:0000012!1.10e-09!682;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679|ontology_enrichment_celltype_v019=CL:0000054;5.71e-09;2!CL:0002545;5.71e-09;2!CL:0000137;5.71e-09;2!CL:0000092;5.71e-09;2!CL:0002539;4.80e-07;10|ontology_enrichment_celltype_v019_2=CL:0002545,3.71e-09,2;CL:0000054,5.49e-09,2;CL:0000137,5.49e-09,2;CL:0000092,5.49e-09,2;CL:0002539,3.77e-07,10|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!8.31e-15!235;DOID:14566!1.96e-14!239;DOID:0050687!8.42e-09!143;DOID:305!2.55e-08!106;DOID:0050686!3.12e-07!137|ontology_enrichment_disease_v019=DOID:0060085;1.31e-16;1!DOID:3165;1.31e-16;1!DOID:0060121;1.31e-16;1!DOID:2438;1.31e-16;1!DOID:4418;1.31e-16;1!DOID:200;5.71e-09;2!DOID:4305;5.71e-09;2|ontology_enrichment_disease_v019_2=DOID:0060085,1.21e-16,1;DOID:3165,1.21e-16,1;DOID:0060121,1.21e-16,1;DOID:2438,1.21e-16,1;DOID:4418,1.21e-16,1;DOID:200,5.49e-09,2;DOID:4305,5.49e-09,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0005800;5.71e-09;2!UBERON:0001515;5.71e-09;2!UBERON:0000947;3.84e-07;21!UBERON:0010191;3.84e-07;21!UBERON:0004237;4.80e-07;10!UBERON:0004695;4.80e-07;10!UBERON:0002111;4.80e-07;10!UBERON:0004178;4.80e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0005800,3.71e-09,2;UBERON:0001515,3.71e-09,2;UBERON:0000947,2.88e-07,21;UBERON:0010191,2.88e-07,21;UBERON:0004237,3.77e-07,10;UBERON:0004695,3.77e-07,10;UBERON:0002111,3.77e-07,10;UBERON:0004178,3.77e-07,10|phase1_expression=0,0,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,1.46062018077475,1.46379839637152,0,0,0,0,0.273748850145768,0,0.840547463227464,1.14940825229924,0.629686250509434,0,0.383829398097213,0.154816123316076,0,0,0,0.387336002901508,0.426507697462265,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.790152254325231,0.590129310341499,0,0.205601498999509,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0.260118695119756,0,0,0,0.14828656316206,0.535081656179426,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0,0,0,0,0.24406205754817,1.47065232138347,0,0.0892997282840798,0.44905874525234,0.337834441449967,0,0,0,0,0,0,0,0.759783069987479,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0.936480230490962,0,0.597794722207204,0.23486899728753,0,0,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0.438977620880838,0.30648779579902,0,0.453728732640084,0,0,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0,0.193260853163297,0,0.286804595389004,0.487894824518382,0.530119073285941,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0,0.721879481669586,0.591534000199219,0.505754070234305,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0.370353780634118,0.325808305310325,0,0,0.463721619900307,0.352226082707465,0.288732895522148,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.16798212819886,0.425325291727159,0.268675568108545,0.290633938513962,0,0.985326475791887,0.176096868026452,0,0,0.25248486685276,0.190493682876507,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0.514414748524284,0,0,0.428933980974443,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0.178428988797162,0,0,0.300946099727719,0,0,1.32845119707087,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0.34444334449382,0,0,0,0.231046011313244,0,0,0.105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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-94bp_to_ENST00000426339_5end | |||
|description=CAGE_peak_1_at_ENST00000426339_5end | |||
|id=chr10:98319846..98319847,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.10e-09!682;CL:0000548!1.38e-09!679;CL:0000004!1.38e-09!679;CL:0000255!1.38e-09!679 | |||
|ontology_enrichment_celltype_v019=CL:0000054;5.71e-09;2!CL:0002545;5.71e-09;2!CL:0000137;5.71e-09;2!CL:0000092;5.71e-09;2!CL:0002539;4.80e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,3.71e-09,2;CL:0000054,5.49e-09,2;CL:0000137,5.49e-09,2;CL:0000092,5.49e-09,2;CL:0002539,3.77e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.31e-15!235;DOID:14566!1.96e-14!239;DOID:0050687!8.42e-09!143;DOID:305!2.55e-08!106;DOID:0050686!3.12e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.31e-16;1!DOID:3165;1.31e-16;1!DOID:0060121;1.31e-16;1!DOID:2438;1.31e-16;1!DOID:4418;1.31e-16;1!DOID:200;5.71e-09;2!DOID:4305;5.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.21e-16,1;DOID:3165,1.21e-16,1;DOID:0060121,1.21e-16,1;DOID:2438,1.21e-16,1;DOID:4418,1.21e-16,1;DOID:200,5.49e-09,2;DOID:4305,5.49e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005800;5.71e-09;2!UBERON:0001515;5.71e-09;2!UBERON:0000947;3.84e-07;21!UBERON:0010191;3.84e-07;21!UBERON:0004237;4.80e-07;10!UBERON:0004695;4.80e-07;10!UBERON:0002111;4.80e-07;10!UBERON:0004178;4.80e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005800,3.71e-09,2;UBERON:0001515,3.71e-09,2;UBERON:0000947,2.88e-07,21;UBERON:0010191,2.88e-07,21;UBERON:0004237,3.77e-07,10;UBERON:0004695,3.77e-07,10;UBERON:0002111,3.77e-07,10;UBERON:0004178,3.77e-07,10 | |||
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| |||
|short_description=p1@ENST00000426339 | |||
}} |
Revision as of 15:11, 10 September 2013
Short description: | p1@ENST00000426339 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000426339_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000426339_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 3.71e-09 | 2 |
bone matrix secreting cell | 5.49e-09 | 2 |
osteocyte | 5.49e-09 | 2 |
osteoclast | 5.49e-09 | 2 |
aortic smooth muscle cell | 3.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
segment of aorta | 3.71e-09 | 2 |
thoracic aorta | 3.71e-09 | 2 |
aorta | 2.88e-07 | 21 |
aortic system | 2.88e-07 | 21 |
blood vessel smooth muscle | 3.77e-07 | 10 |
arterial system smooth muscle | 3.77e-07 | 10 |
artery smooth muscle tissue | 3.77e-07 | 10 |
aorta smooth muscle tissue | 3.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.21e-16 | 1 |
skin benign neoplasm | 1.21e-16 | 1 |
integumentary system benign neoplasm | 1.21e-16 | 1 |
dermis tumor | 1.21e-16 | 1 |
cutaneous fibrous histiocytoma | 1.21e-16 | 1 |
giant cell tumor | 5.49e-09 | 2 |
bone giant cell tumor | 5.49e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.