FFCP PHASE1:Hg19::chr11:111637373..111637437,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5519|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9303|TSSclassifier=S|UniProt=E7EUF3,B4DGQ6,F8W8G1,P30154,A8MY67,B4DK91,B4DWW5|association_with_transcript=-204bp_to_ENST00000412902,NM_001177562,NM_001177563,NM_002716,NM_181699,NM_181700,uc001plw.1,uc001plx.1,uc010rwi.1,uc010rwj.1,uc010rwk.1,uc010rwl.1_5end|description=CAGE_peak_2_at_PPP2R1B_5end|id=chr11:111637373..111637437,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;7.09e-09;29|ontology_enrichment_disease=DOID:305!3.11e-12!106;DOID:0050687!3.24e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.93e-12,106;DOID:0050687,3.80e-07,143|ontology_enrichment_uberon=UBERON:0007023!2.19e-20!115;UBERON:0000481!4.01e-16!347;UBERON:0000475!7.14e-14!365;UBERON:0000033!2.07e-11!123;UBERON:0001007!2.65e-11!155;UBERON:0001555!2.65e-11!155;UBERON:0007026!2.65e-11!155;UBERON:0000153!3.19e-11!129;UBERON:0007811!3.19e-11!129;UBERON:0000062!5.06e-11!511;UBERON:0000477!7.63e-11!286;UBERON:0004121!1.19e-10!169;UBERON:0000468!1.40e-10!659;UBERON:0004119!6.14e-10!169;UBERON:0000925!6.14e-10!169;UBERON:0006595!6.14e-10!169;UBERON:0000924!1.34e-09!173;UBERON:0006601!1.34e-09!173;UBERON:0002616!3.90e-09!59;UBERON:0001049!1.33e-08!57;UBERON:0005068!1.33e-08!57;UBERON:0006241!1.33e-08!57;UBERON:0007135!1.33e-08!57;UBERON:0000955!1.56e-08!69;UBERON:0006238!1.56e-08!69;UBERON:0001017!2.42e-08!82;UBERON:0000922!4.00e-08!612;UBERON:0005743!4.62e-08!86;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0004921!1.45e-07!129;UBERON:0004185!1.45e-07!129;UBERON:0000077!1.76e-07!130;UBERON:0003104!2.69e-07!238;UBERON:0009142!2.69e-07!238;UBERON:0000064!3.08e-07!219;UBERON:0004111!4.58e-07!241;UBERON:0002050!6.58e-07!605;UBERON:0005423!6.58e-07!605;UBERON:0000467!6.67e-07!625;UBERON:0003075!7.53e-07!86;UBERON:0007284!7.53e-07!86;UBERON:0000923!8.17e-07!604;UBERON:0005291!8.17e-07!604;UBERON:0006598!8.17e-07!604;UBERON:0002532!8.17e-07!604;UBERON:0003080!9.07e-07!42|ontology_enrichment_uberon_v019=UBERON:0007023;5.79e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.67e-21,114;UBERON:0011216,3.57e-12,223;UBERON:0001007,2.57e-10,145;UBERON:0001555,2.57e-10,145;UBERON:0007026,2.57e-10,145;UBERON:0004119,1.62e-08,160;UBERON:0000925,1.62e-08,160;UBERON:0006595,1.62e-08,160;UBERON:0010314,1.84e-07,132;UBERON:0001004,6.04e-07,74;UBERON:0004121,9.18e-07,171;UBERON:0000924,9.18e-07,171;UBERON:0006601,9.18e-07,171|phase1_expression=0.181678379270557,3.8538094300377,0.986680828671798,0,0,0.872338524100369,5.06599756336621,0.631719873426831,1.30592814099919,0.491467873003018,0,1.09220686065086,0.527533956456907,1.36142988256051,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.612002073732759,0,0,1.23186982565596,0.87879847716362,0.993374274723366,0.410502947249729,0.629686250509434,0,0.383829398097213,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.579386075843295,0,1.94653948121054,0.378139268656271,1.33037638477538,1.75669571386252,1.17881167947941,0,0,0,0,0.132957960518865,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0.550236083880135,0,0,0.35576626268671,0.66944122552934,0.805658634218294,0,0,1.10298924103761,0.81014194788176,0.17859945656816,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,2.25095607382472,1.72101972449288,0.354668382198357,0,0,1.2333377420858,0.622422070799533,0.134710672069688,0.326923806226917,1.36221684880438,1.72852777344,0.468642863667593,3.43376084513353,0,0.149448680551801,0.352303495931295,0.323745888736263,0.561803226808994,0.61246251376468,1.10550885580591,0.929932030581889,3.56400857184616,1.23633464639278,0,0,1.17835279767846,0.625592599359821,1.93944880838928,0,1.5324389789951,2.85452311922534,0.340296549480063,1.07633781413317,0.427114777637135,0.211931901159562,2.40072876867522,0.309157587715317,2.06112432036503,0.558350568994769,2.86919764810153,0.974370051611986,0.504867548488229,0.0920498986422993,0.323292113637624,0.710019185033229,0.604512589365842,2.03472710772585,0.773043412653187,1.90922284413584,2.58124135850103,2.31750041646231,2.78312513475119,1.16193942869518,1.45125477021519,1.7662459561294,1.09493207722749,1.56449532329816,1.28648187638577,2.76269842704961,0.928735856063958,0.721879481669586,1.41968160047813,1.85443159085912,1.20505514941741,1.54411561825352,1.7430355527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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5519 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9303 | |||
|TSSclassifier=S | |||
|UniProt=E7EUF3,B4DGQ6,F8W8G1,P30154,A8MY67,B4DK91,B4DWW5 | |||
|association_with_transcript=-204bp_to_ENST00000412902,NM_001177562,NM_001177563,NM_002716,NM_181699,NM_181700,uc001plw.1,uc001plx.1,uc010rwi.1,uc010rwj.1,uc010rwk.1,uc010rwl.1_5end | |||
|description=CAGE_peak_2_at_PPP2R1B_5end | |||
|id=chr11:111637373..111637437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.09e-09;29 | |||
|ontology_enrichment_disease=DOID:305!3.11e-12!106;DOID:0050687!3.24e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.93e-12,106;DOID:0050687,3.80e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-20!115;UBERON:0000481!4.01e-16!347;UBERON:0000475!7.14e-14!365;UBERON:0000033!2.07e-11!123;UBERON:0001007!2.65e-11!155;UBERON:0001555!2.65e-11!155;UBERON:0007026!2.65e-11!155;UBERON:0000153!3.19e-11!129;UBERON:0007811!3.19e-11!129;UBERON:0000062!5.06e-11!511;UBERON:0000477!7.63e-11!286;UBERON:0004121!1.19e-10!169;UBERON:0000468!1.40e-10!659;UBERON:0004119!6.14e-10!169;UBERON:0000925!6.14e-10!169;UBERON:0006595!6.14e-10!169;UBERON:0000924!1.34e-09!173;UBERON:0006601!1.34e-09!173;UBERON:0002616!3.90e-09!59;UBERON:0001049!1.33e-08!57;UBERON:0005068!1.33e-08!57;UBERON:0006241!1.33e-08!57;UBERON:0007135!1.33e-08!57;UBERON:0000955!1.56e-08!69;UBERON:0006238!1.56e-08!69;UBERON:0001017!2.42e-08!82;UBERON:0000922!4.00e-08!612;UBERON:0005743!4.62e-08!86;UBERON:0000073!1.41e-07!94;UBERON:0001016!1.41e-07!94;UBERON:0004921!1.45e-07!129;UBERON:0004185!1.45e-07!129;UBERON:0000077!1.76e-07!130;UBERON:0003104!2.69e-07!238;UBERON:0009142!2.69e-07!238;UBERON:0000064!3.08e-07!219;UBERON:0004111!4.58e-07!241;UBERON:0002050!6.58e-07!605;UBERON:0005423!6.58e-07!605;UBERON:0000467!6.67e-07!625;UBERON:0003075!7.53e-07!86;UBERON:0007284!7.53e-07!86;UBERON:0000923!8.17e-07!604;UBERON:0005291!8.17e-07!604;UBERON:0006598!8.17e-07!604;UBERON:0002532!8.17e-07!604;UBERON:0003080!9.07e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.79e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.67e-21,114;UBERON:0011216,3.57e-12,223;UBERON:0001007,2.57e-10,145;UBERON:0001555,2.57e-10,145;UBERON:0007026,2.57e-10,145;UBERON:0004119,1.62e-08,160;UBERON:0000925,1.62e-08,160;UBERON:0006595,1.62e-08,160;UBERON:0010314,1.84e-07,132;UBERON:0001004,6.04e-07,74;UBERON:0004121,9.18e-07,171;UBERON:0000924,9.18e-07,171;UBERON:0006601,9.18e-07,171 | |||
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| |||
|short_description=p2@PPP2R1B | |||
}} |
Revision as of 15:41, 10 September 2013
Short description: | p2@PPP2R1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PPP2R1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_ENST00000412902, NM_001177562, NM_001177563, NM_002716, NM_181699, NM_181700, uc001plw.1, uc001plx.1, uc010rwi.1, uc010rwj.1, uc010rwk.1, uc010rwl.1_5end |
EntrezGene: | PPP2R1B |
HGNC: | 9303 |
UniProt: | E7EUF3B4DGQ6F8W8G1P30154A8MY67B4DK91B4DWW5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.67e-21 | 114 |
organ system subdivision | 3.57e-12 | 223 |
digestive system | 2.57e-10 | 145 |
digestive tract | 2.57e-10 | 145 |
primitive gut | 2.57e-10 | 145 |
endoderm-derived structure | 1.62e-08 | 160 |
endoderm | 1.62e-08 | 160 |
presumptive endoderm | 1.62e-08 | 160 |
structure with developmental contribution from neural crest | 1.84e-07 | 132 |
respiratory system | 6.04e-07 | 74 |
ectoderm-derived structure | 9.18e-07 | 171 |
ectoderm | 9.18e-07 | 171 |
presumptive ectoderm | 9.18e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.93e-12 | 106 |
cell type cancer | 3.80e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.