FFCP PHASE1:Hg19::chr11:111852954..111852989,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=85458|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23695|TSSclassifier=S|UniProt=|association_with_transcript=12bp_to_ENST00000524609,uc001pmn.2_5end|coexpression_cluster_id=C1607|description=CAGE_peak_7_at_DIXDC1_5end|id=chr11:111852954..111852989,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006595;2.92e-08;86!UBERON:0007297;2.04e-07;2!UBERON:0001041;3.47e-07;30|ontology_enrichment_disease=DOID:305!7.38e-08!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.53e-20!115;UBERON:0004921!6.35e-14!129;UBERON:0004185!6.35e-14!129;UBERON:0001007!8.45e-14!155;UBERON:0001555!8.45e-14!155;UBERON:0007026!8.45e-14!155;UBERON:0004119!1.66e-12!169;UBERON:0000925!1.66e-12!169;UBERON:0006595!1.66e-12!169;UBERON:0000466!3.94e-12!126;UBERON:0000077!1.10e-09!130;UBERON:0003135!4.87e-09!11;UBERON:0001041!6.71e-09!98;UBERON:0000481!2.22e-08!347;UBERON:0005177!2.39e-08!107;UBERON:0005911!3.33e-08!82;UBERON:0000464!4.73e-08!104;UBERON:0009497!6.89e-08!25;UBERON:0000015!6.89e-08!25;UBERON:0002423!6.89e-08!25;UBERON:0006235!6.89e-08!25;UBERON:0004161!6.89e-08!25;UBERON:0005409!3.27e-07!35;UBERON:0001048!5.92e-07!168;UBERON:0000160!9.78e-07!27|ontology_enrichment_uberon_v019=UBERON:0004921;3.93e-15;33!UBERON:0005409;6.97e-15;22!UBERON:0000160;4.67e-11;17!UBERON:0006947;2.69e-10;3!UBERON:0004054;2.69e-10;3!UBERON:0002108;1.89e-09;4!UBERON:0003135;7.89e-09;11!UBERON:0005904;8.60e-08;4!UBERON:0002365;3.07e-07;31!UBERON:0002330;3.07e-07;31!UBERON:0002368;3.28e-07;33!UBERON:0000058;3.80e-07;10!UBERON:0001829;5.33e-07;2!UBERON:0000922;6.59e-07;49!UBERON:0001041;7.57e-07;14!UBERON:0003296;8.51e-07;4!UBERON:0010133;8.51e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.27e-15,118;UBERON:0001007,3.92e-14,145;UBERON:0001555,3.92e-14,145;UBERON:0007026,3.92e-14,145;UBERON:0005409,7.29e-13,25;UBERON:0004119,5.48e-12,160;UBERON:0000925,5.48e-12,160;UBERON:0006595,5.48e-12,160;UBERON:0007023,1.11e-11,114;UBERON:0000160,3.60e-11,17;UBERON:0001041,8.66e-11,87;UBERON:0006947,2.69e-10,3;UBERON:0004054,2.69e-10,3;UBERON:0002108,1.47e-09,4;UBERON:0011216,2.94e-09,223;UBERON:0003135,7.57e-09,11;UBERON:0002530,1.49e-08,59;UBERON:0005904,8.61e-08,4;UBERON:0002368,2.01e-07,35;UBERON:0002365,2.82e-07,31;UBERON:0002330,2.82e-07,31;UBERON:0001829,4.97e-07,2;UBERON:0005177,4.98e-07,101;UBERON:0009856,5.68e-07,26;UBERON:0003296,9.05e-07,4;UBERON:0010133,9.05e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,1.72288698817931,1.51052125730374,0.310983165046111,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,2.94848165003288,2.95394953340702,0,1.47586126251736,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0.451199612907412,0.385076685522074,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0.650756789328606,3.60643540767028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,3.57746442951761,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0.146508179271894,0,0,0,0,0.890894042497916,0,0,0.140669416410513,0,0,0.422250816255987,0.796991953004279,3.03912307084262,0,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,4.81029999979076,1.44999915086959,0.1137934482855,2.79679015322043,4.01859059005492,0,0,0,0,0,1.52581736317083,0,0,0,0,0.41827123283581,0.461701551022782,0,0,0.718061155278177,0.434589487688032,0,0.274792780205587,0,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,3.98104772431402,2.56526937059684,4.27721101453538,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,21.3075577538671,12.0990716048664,0,0.063186579628488,0,0,0,0,0,0,1.42304773014896,0,2.08271686002157,0,0,16.5990334829929,0,0,0,0,0.581934098930517,0.0882561266915003,0.90392296312213,0,0,0,0.97775691367401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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=85458 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23695 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000524609,uc001pmn.2_5end | |||
|coexpression_cluster_id=C1607 | |||
|description=CAGE_peak_7_at_DIXDC1_5end | |||
|id=chr11:111852954..111852989,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.92e-08;86!UBERON:0007297;2.04e-07;2!UBERON:0001041;3.47e-07;30 | |||
|ontology_enrichment_disease=DOID:305!7.38e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.53e-20!115;UBERON:0004921!6.35e-14!129;UBERON:0004185!6.35e-14!129;UBERON:0001007!8.45e-14!155;UBERON:0001555!8.45e-14!155;UBERON:0007026!8.45e-14!155;UBERON:0004119!1.66e-12!169;UBERON:0000925!1.66e-12!169;UBERON:0006595!1.66e-12!169;UBERON:0000466!3.94e-12!126;UBERON:0000077!1.10e-09!130;UBERON:0003135!4.87e-09!11;UBERON:0001041!6.71e-09!98;UBERON:0000481!2.22e-08!347;UBERON:0005177!2.39e-08!107;UBERON:0005911!3.33e-08!82;UBERON:0000464!4.73e-08!104;UBERON:0009497!6.89e-08!25;UBERON:0000015!6.89e-08!25;UBERON:0002423!6.89e-08!25;UBERON:0006235!6.89e-08!25;UBERON:0004161!6.89e-08!25;UBERON:0005409!3.27e-07!35;UBERON:0001048!5.92e-07!168;UBERON:0000160!9.78e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.93e-15;33!UBERON:0005409;6.97e-15;22!UBERON:0000160;4.67e-11;17!UBERON:0006947;2.69e-10;3!UBERON:0004054;2.69e-10;3!UBERON:0002108;1.89e-09;4!UBERON:0003135;7.89e-09;11!UBERON:0005904;8.60e-08;4!UBERON:0002365;3.07e-07;31!UBERON:0002330;3.07e-07;31!UBERON:0002368;3.28e-07;33!UBERON:0000058;3.80e-07;10!UBERON:0001829;5.33e-07;2!UBERON:0000922;6.59e-07;49!UBERON:0001041;7.57e-07;14!UBERON:0003296;8.51e-07;4!UBERON:0010133;8.51e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,2.27e-15,118;UBERON:0001007,3.92e-14,145;UBERON:0001555,3.92e-14,145;UBERON:0007026,3.92e-14,145;UBERON:0005409,7.29e-13,25;UBERON:0004119,5.48e-12,160;UBERON:0000925,5.48e-12,160;UBERON:0006595,5.48e-12,160;UBERON:0007023,1.11e-11,114;UBERON:0000160,3.60e-11,17;UBERON:0001041,8.66e-11,87;UBERON:0006947,2.69e-10,3;UBERON:0004054,2.69e-10,3;UBERON:0002108,1.47e-09,4;UBERON:0011216,2.94e-09,223;UBERON:0003135,7.57e-09,11;UBERON:0002530,1.49e-08,59;UBERON:0005904,8.61e-08,4;UBERON:0002368,2.01e-07,35;UBERON:0002365,2.82e-07,31;UBERON:0002330,2.82e-07,31;UBERON:0001829,4.97e-07,2;UBERON:0005177,4.98e-07,101;UBERON:0009856,5.68e-07,26;UBERON:0003296,9.05e-07,4;UBERON:0010133,9.05e-07,4 | |||
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|short_description=p7@DIXDC1 | |||
}} |
Revision as of 15:43, 10 September 2013
Short description: | p7@DIXDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_DIXDC1_5end |
Coexpression cluster: | C1607_seminal_ductus_Hepatocyte_epididymis_pancreas_kidney_stomach |
Association with transcript: | 12bp_to_ENST00000524609, uc001pmn.2_5end |
EntrezGene: | DIXDC1 |
HGNC: | 23695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 2.27e-15 | 118 |
digestive system | 3.92e-14 | 145 |
digestive tract | 3.92e-14 | 145 |
primitive gut | 3.92e-14 | 145 |
gastrointestinal system | 7.29e-13 | 25 |
endoderm-derived structure | 5.48e-12 | 160 |
endoderm | 5.48e-12 | 160 |
presumptive endoderm | 5.48e-12 | 160 |
adult organism | 1.11e-11 | 114 |
intestine | 3.60e-11 | 17 |
foregut | 8.66e-11 | 87 |
male genital duct | 2.69e-10 | 3 |
internal male genitalia | 2.69e-10 | 3 |
small intestine | 1.47e-09 | 4 |
organ system subdivision | 2.94e-09 | 223 |
male reproductive organ | 7.57e-09 | 11 |
gland | 1.49e-08 | 59 |
duct of male reproductive system | 8.61e-08 | 4 |
endocrine gland | 2.01e-07 | 35 |
exocrine gland | 2.82e-07 | 31 |
exocrine system | 2.82e-07 | 31 |
major salivary gland | 4.97e-07 | 2 |
trunk region element | 4.98e-07 | 101 |
sac | 5.68e-07 | 26 |
gland of diencephalon | 9.05e-07 | 4 |
neuroendocrine gland | 9.05e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.