FFCP PHASE1:Hg19::chr11:134145673..134145685,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:134145673..134145685,+|id=chr11:134145673..134145685,+|ontology_enrichment_celltype=CL:0002322!4.29e-09!5;CL:0002328!8.62e-09!3;CL:0002159!1.03e-08!13;CL:0000221!5.07e-08!71;CL:0000080!1.44e-07!6;CL:0002077!4.88e-07!33|ontology_enrichment_celltype_v019=CL:0000540;2.32e-25;6!CL:0000404;2.32e-25;6!CL:0002319;4.21e-10;25!CL:0002573;9.11e-07;2|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-25,6;CL:0000031,1.67e-25,6;CL:0000404,1.67e-25,6;CL:0000047,2.57e-19,8;CL:0002319,4.02e-10,25|ontology_enrichment_development_v019=CL:0000031;2.32e-25;6!UBERON:0006215;9.11e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.94e-15!94;UBERON:0001016!7.94e-15!94;UBERON:0001049!2.14e-11!57;UBERON:0005068!2.14e-11!57;UBERON:0006241!2.14e-11!57;UBERON:0007135!2.14e-11!57;UBERON:0001869!6.88e-11!32;UBERON:0002616!7.46e-11!59;UBERON:0005743!9.38e-11!86;UBERON:0001017!1.62e-10!82;UBERON:0000924!2.43e-10!173;UBERON:0006601!2.43e-10!173;UBERON:0001893!4.39e-10!34;UBERON:0002020!4.43e-10!34;UBERON:0003528!4.43e-10!34;UBERON:0004121!5.24e-10!169;UBERON:0000955!1.69e-09!69;UBERON:0006238!1.69e-09!69;UBERON:0001950!2.38e-09!20;UBERON:0002346!5.95e-09!90;UBERON:0002791!6.08e-09!33;UBERON:0004815!8.62e-09!3;UBERON:0002031!8.62e-09!3;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0002619!2.29e-08!22;UBERON:0007023!3.45e-08!115;UBERON:0002780!6.93e-08!41;UBERON:0001890!6.93e-08!41;UBERON:0006240!6.93e-08!41;UBERON:0000033!7.80e-08!123;UBERON:0003080!1.24e-07!42;UBERON:0000153!3.46e-07!129;UBERON:0007811!3.46e-07!129;UBERON:0000956!3.51e-07!25;UBERON:0000203!3.51e-07!25;UBERON:0000010!4.52e-07!8;UBERON:0003056!5.24e-07!61;UBERON:0004733!8.04e-07!12;UBERON:0002028!8.04e-07!12;UBERON:0007277!8.04e-07!12|ontology_enrichment_uberon_v019=UBERON:0002331;9.09e-16;10!UBERON:0000178;1.01e-10;15!UBERON:0000179;1.01e-10;15!UBERON:0000463;1.01e-10;15!UBERON:0000478;6.61e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.10e-16,10;UBERON:0000358,9.10e-16,10;UBERON:0000307,9.10e-16,10;UBERON:0000091,9.10e-16,10;UBERON:0000087,9.10e-16,10;UBERON:0007010,9.10e-16,10;UBERON:0007806,9.10e-16,10;UBERON:0008780,9.10e-16,10;UBERON:0005728,9.10e-16,10;UBERON:0000178,1.01e-10,15;UBERON:0000179,1.01e-10,15;UBERON:0000463,1.01e-10,15;UBERON:0000478,6.61e-07,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0.609868530647977,0.927708378250397,0.929551542956147,0.518305275076852,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0.824019371133798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,2.22415090103705,2.61054873763638,0,0,0,0,0,0,0.394584402849391,0,0,0,1.65355761355942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89355667237035,1.78801267576404,1.24632101408756,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.55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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:134145673..134145685,+ | |||
|id=chr11:134145673..134145685,+ | |||
|ontology_enrichment_celltype=CL:0002322!4.29e-09!5;CL:0002328!8.62e-09!3;CL:0002159!1.03e-08!13;CL:0000221!5.07e-08!71;CL:0000080!1.44e-07!6;CL:0002077!4.88e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.32e-25;6!CL:0000404;2.32e-25;6!CL:0002319;4.21e-10;25!CL:0002573;9.11e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.67e-25,6;CL:0000031,1.67e-25,6;CL:0000404,1.67e-25,6;CL:0000047,2.57e-19,8;CL:0002319,4.02e-10,25 | |||
|ontology_enrichment_development_v019=CL:0000031;2.32e-25;6!UBERON:0006215;9.11e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.94e-15!94;UBERON:0001016!7.94e-15!94;UBERON:0001049!2.14e-11!57;UBERON:0005068!2.14e-11!57;UBERON:0006241!2.14e-11!57;UBERON:0007135!2.14e-11!57;UBERON:0001869!6.88e-11!32;UBERON:0002616!7.46e-11!59;UBERON:0005743!9.38e-11!86;UBERON:0001017!1.62e-10!82;UBERON:0000924!2.43e-10!173;UBERON:0006601!2.43e-10!173;UBERON:0001893!4.39e-10!34;UBERON:0002020!4.43e-10!34;UBERON:0003528!4.43e-10!34;UBERON:0004121!5.24e-10!169;UBERON:0000955!1.69e-09!69;UBERON:0006238!1.69e-09!69;UBERON:0001950!2.38e-09!20;UBERON:0002346!5.95e-09!90;UBERON:0002791!6.08e-09!33;UBERON:0004815!8.62e-09!3;UBERON:0002031!8.62e-09!3;UBERON:0003075!1.19e-08!86;UBERON:0007284!1.19e-08!86;UBERON:0002619!2.29e-08!22;UBERON:0007023!3.45e-08!115;UBERON:0002780!6.93e-08!41;UBERON:0001890!6.93e-08!41;UBERON:0006240!6.93e-08!41;UBERON:0000033!7.80e-08!123;UBERON:0003080!1.24e-07!42;UBERON:0000153!3.46e-07!129;UBERON:0007811!3.46e-07!129;UBERON:0000956!3.51e-07!25;UBERON:0000203!3.51e-07!25;UBERON:0000010!4.52e-07!8;UBERON:0003056!5.24e-07!61;UBERON:0004733!8.04e-07!12;UBERON:0002028!8.04e-07!12;UBERON:0007277!8.04e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.09e-16;10!UBERON:0000178;1.01e-10;15!UBERON:0000179;1.01e-10;15!UBERON:0000463;1.01e-10;15!UBERON:0000478;6.61e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.10e-16,10;UBERON:0000358,9.10e-16,10;UBERON:0000307,9.10e-16,10;UBERON:0000091,9.10e-16,10;UBERON:0000087,9.10e-16,10;UBERON:0007010,9.10e-16,10;UBERON:0007806,9.10e-16,10;UBERON:0008780,9.10e-16,10;UBERON:0005728,9.10e-16,10;UBERON:0000178,1.01e-10,15;UBERON:0000179,1.01e-10,15;UBERON:0000463,1.01e-10,15;UBERON:0000478,6.61e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0.609868530647977,0.927708378250397,0.929551542956147,0.518305275076852,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07254154547469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0.824019371133798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37216902944498,2.22415090103705,2.61054873763638,0,0,0,0,0,0,0.394584402849391,0,0,0,1.65355761355942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0.195551382734803,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89355667237035,1.78801267576404,1.24632101408756,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.559518030877778,0,0.127894371303652,0.215649622793364,0,0.54604819096007,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,1.56215619722769,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,1.18332000730565,0.852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599646935549574,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0.801652215796681,0,0.752122617877125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr11:134145673..134145685,+ | |||
}} |
Revision as of 16:46, 10 September 2013
Short description: | p@chr11:134145673..134145685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:134145673..134145685, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.67e-25 | 6 |
neuroblast | 1.67e-25 | 6 |
electrically signaling cell | 1.67e-25 | 6 |
neuronal stem cell | 2.57e-19 | 8 |
neural cell | 4.02e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.10e-16 | 10 |
blastocyst | 9.10e-16 | 10 |
blastula | 9.10e-16 | 10 |
bilaminar disc | 9.10e-16 | 10 |
inner cell mass | 9.10e-16 | 10 |
cleaving embryo | 9.10e-16 | 10 |
connecting stalk | 9.10e-16 | 10 |
inner cell mass derived epiblast | 9.10e-16 | 10 |
extraembryonic mesoderm | 9.10e-16 | 10 |
blood | 1.01e-10 | 15 |
haemolymphatic fluid | 1.01e-10 | 15 |
organism substance | 1.01e-10 | 15 |
extraembryonic structure | 6.61e-07 | 24 |
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